RNA–Protein interactions for RNA: ENST00000506063.1

TCOF1-208, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 4

Gene TCOF1, Length 526 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-208ENST00000506063 LINC00304Q8N9R0 145 aa1.81□□□□□ -2.12
TCOF1-208ENST00000506063 COX7B2Q8TF08 81 aa1.81□□□□□ -2.12
TCOF1-208ENST00000506063 AMELXQ99217 191 aa1.81□□□□□ -2.12
TCOF1-208ENST00000506063 OPRPNQ99935 248 aaPredicted RBP1.81□□□□□ -2.12
TCOF1-208ENST00000506063 GAGE2DQ9UEU5 116 aa1.81□□□□□ -2.12
TCOF1-208ENST00000506063 HSPB8Q9UJY1 196 aa1.81□□□□□ -2.12
TCOF1-208ENST00000506063 IGLV8-61A0A075B6I0 122 aa1.8□□□□□ -2.12
TCOF1-208ENST00000506063 IGLV5-45A0A087WSX0 123 aa1.8□□□□□ -2.12
TCOF1-208ENST00000506063 LINC01546A6NGU7 62 aa1.8□□□□□ -2.12
TCOF1-208ENST00000506063 SMIM1B2RUZ4 78 aa1.8□□□□□ -2.12
TCOF1-208ENST00000506063 H0Y8G0 127 aa1.8□□□□□ -2.12
TCOF1-208ENST00000506063 LEPROTL1O95214 131 aa1.8□□□□□ -2.12
TCOF1-208ENST00000506063 SPINK8P0C7L1 97 aa1.8□□□□□ -2.12
TCOF1-208ENST00000506063 LINC00614P0C842 121 aa1.8□□□□□ -2.12
TCOF1-208ENST00000506063 TLX1NBP0CAT3 122 aa1.8□□□□□ -2.12
TCOF1-208ENST00000506063 IGLC3P0DOY3 106 aa1.8□□□□□ -2.12
TCOF1-208ENST00000506063 PLNP26678 52 aa1.8□□□□□ -2.12
TCOF1-208ENST00000506063 CTAG1AP78358 180 aa1.8□□□□□ -2.12
TCOF1-208ENST00000506063 PMCHL1Q16048 86 aa1.8□□□□□ -2.12
TCOF1-208ENST00000506063 PCOTHQ58A44 107 aa1.8□□□□□ -2.12
TCOF1-208ENST00000506063 C9orf116Q5BN46 136 aaPredicted RBP1.8□□□□□ -2.12
TCOF1-208ENST00000506063 TMEM170BQ5T4T1 132 aa1.8□□□□□ -2.12
TCOF1-208ENST00000506063 ZC2HC1BQ5TFG8 222 aa1.8□□□□□ -2.12
TCOF1-208ENST00000506063 C2orf82Q6UX34 121 aa1.8□□□□□ -2.12
TCOF1-208ENST00000506063 FAM19A3Q7Z5A8 133 aa1.8□□□□□ -2.12
TCOF1-208ENST00000506063 KRTAP7-1Q8IUC3 87 aa1.8□□□□□ -2.12
TCOF1-208ENST00000506063 NKAPP1Q8N9T2 125 aa1.8□□□□□ -2.12
TCOF1-208ENST00000506063 IFI27L1Q96BM0 104 aa1.8□□□□□ -2.12
TCOF1-208ENST00000506063 C6orf48Q9UBA6 75 aa1.8□□□□□ -2.12
TCOF1-208ENST00000506063 CDKN2A-AS1Q9UH64 79 aa1.8□□□□□ -2.12
TCOF1-208ENST00000506063 TRAV12-1A0A0B4J245 112 aa1.79□□□□□ -2.12
TCOF1-208ENST00000506063 C20orf202A1L168 122 aa1.79□□□□□ -2.12
TCOF1-208ENST00000506063 ATP6V1G1O75348 118 aa1.79□□□□□ -2.12
TCOF1-208ENST00000506063 TRGC2P03986 189 aa1.79□□□□□ -2.12
TCOF1-208ENST00000506063 ZNF22P17026 224 aaPredicted RBP1.79□□□□□ -2.12
TCOF1-208ENST00000506063 S100A12P80511 92 aa1.79□□□□□ -2.12
TCOF1-208ENST00000506063 LBHQ53QV2 105 aaPredicted RBP1.79□□□□□ -2.12
TCOF1-208ENST00000506063 MEIG1Q5JSS6 88 aa1.79□□□□□ -2.12
TCOF1-208ENST00000506063 UNQ6190/PRO20217Q6UXQ8 127 aa1.79□□□□□ -2.12
TCOF1-208ENST00000506063 MIEN1Q9BRT3 115 aa1.79□□□□□ -2.12
TCOF1-208ENST00000506063 MAP1LC3CQ9BXW4 147 aa1.79□□□□□ -2.12
TCOF1-208ENST00000506063 CST9LQ9H4G1 147 aa1.79□□□□□ -2.12
TCOF1-208ENST00000506063 ANAPC11Q9NYG5 84 aa1.79□□□□□ -2.12
TCOF1-208ENST00000506063 CHTOPQ9Y3Y2 248 aaKnown RBP1.79□□□□□ -2.12
TCOF1-208ENST00000506063 A0A096LNJ9 63 aa1.78□□□□□ -2.12
TCOF1-208ENST00000506063 C11orf86A6NJI1 115 aa1.78□□□□□ -2.12
TCOF1-208ENST00000506063 LINC00587B1AMM8 73 aa1.78□□□□□ -2.12
TCOF1-208ENST00000506063 NUPR1O60356 82 aa1.78□□□□□ -2.12
TCOF1-208ENST00000506063 SERF1AO75920 110 aa1.78□□□□□ -2.12
TCOF1-208ENST00000506063 DPM2O94777 84 aa1.78□□□□□ -2.12
TCOF1-208ENST00000506063 LGALS3P17931 250 aaKnown RBP1.78□□□□□ -2.12
TCOF1-208ENST00000506063 HERV-K104P63124 156 aa1.78□□□□□ -2.12
TCOF1-208ENST00000506063 RPL24P83731 157 aaKnown RBP1.78□□□□□ -2.12
TCOF1-208ENST00000506063 COX17Q14061 63 aa1.78□□□□□ -2.12
TCOF1-208ENST00000506063 C10orf25Q5T742 122 aa1.78□□□□□ -2.12
TCOF1-208ENST00000506063 MRPL55Q7Z7F7 128 aaKnown RBP1.78□□□□□ -2.12
TCOF1-208ENST00000506063 SLC7A5P1Q8MH63 180 aa1.78□□□□□ -2.12
TCOF1-208ENST00000506063 FAM104AQ969W3 186 aa1.78□□□□□ -2.12
TCOF1-208ENST00000506063 XAGE1AQ9HD64 81 aa1.78□□□□□ -2.12
TCOF1-208ENST00000506063 TP73-AS1Q9UF72 201 aa1.78□□□□□ -2.12
TCOF1-208ENST00000506063 ERG28Q9UKR5 140 aa1.78□□□□□ -2.12
TCOF1-208ENST00000506063 IGLV5-39A0A0G2JS06 123 aa1.77□□□□□ -2.13
TCOF1-208ENST00000506063 MYMXA0A1B0GTQ4 84 aa1.77□□□□□ -2.13
TCOF1-208ENST00000506063 FAM168BA1KXE4 195 aa1.77□□□□□ -2.13
TCOF1-208ENST00000506063 ZNF861PO60384 105 aa1.77□□□□□ -2.13
TCOF1-208ENST00000506063 IGKCP01834 107 aa1.77□□□□□ -2.13
TCOF1-208ENST00000506063 FABP4P15090 132 aa1.77□□□□□ -2.13
TCOF1-208ENST00000506063 S100A2P29034 98 aa1.77□□□□□ -2.13
TCOF1-208ENST00000506063 PFN2P35080 140 aa1.77□□□□□ -2.13
TCOF1-208ENST00000506063 RPL28P46779 137 aaKnown RBP1.77□□□□□ -2.13
TCOF1-208ENST00000506063 NMUP48645 174 aa1.77□□□□□ -2.13
TCOF1-208ENST00000506063 UBE2AP49459 152 aa1.77□□□□□ -2.13
TCOF1-208ENST00000506063 AKR1D1P51857 326 aa1.77□□□□□ -2.13
TCOF1-208ENST00000506063 LINC00158P58513 81 aa1.77□□□□□ -2.13
TCOF1-208ENST00000506063 KIAA0087Q14695 138 aa1.77□□□□□ -2.13
TCOF1-208ENST00000506063 COX6B2Q6YFQ2 88 aa1.77□□□□□ -2.13
TCOF1-208ENST00000506063 FAM19A2Q8N3H0 131 aa1.77□□□□□ -2.13
TCOF1-208ENST00000506063 PLEKHB2Q96CS7 222 aa1.77□□□□□ -2.13
TCOF1-208ENST00000506063 URB1-AS1Q96HZ7 61 aa1.77□□□□□ -2.13
TCOF1-208ENST00000506063 YPEL4Q96NS1 127 aa1.77□□□□□ -2.13
TCOF1-208ENST00000506063 NDUFA12Q9UI09 145 aa1.77□□□□□ -2.13
TCOF1-208ENST00000506063 IGKV2-28A0A075B6P5 120 aa1.76□□□□□ -2.13
TCOF1-208ENST00000506063 TMEM223A0PJW6 202 aa1.76□□□□□ -2.13
TCOF1-208ENST00000506063 GAGE10A6NGK3 116 aa1.76□□□□□ -2.13
TCOF1-208ENST00000506063 HSBP1L1C9JCN9 74 aa1.76□□□□□ -2.13
TCOF1-208ENST00000506063 HIST1H2BKO60814 126 aa1.76□□□□□ -2.13
TCOF1-208ENST00000506063 SCO1O75880 301 aa1.76□□□□□ -2.13
TCOF1-208ENST00000506063 IGKV2D-28P01615 120 aa1.76□□□□□ -2.13
TCOF1-208ENST00000506063 S100A6P06703 90 aa1.76□□□□□ -2.13
TCOF1-208ENST00000506063 HIST1H2BJP06899 126 aa1.76□□□□□ -2.13
TCOF1-208ENST00000506063 S100A1P23297 94 aa1.76□□□□□ -2.13
TCOF1-208ENST00000506063 HIST1H2BOP23527 126 aa1.76□□□□□ -2.13
TCOF1-208ENST00000506063 HIST1H2BBP33778 126 aa1.76□□□□□ -2.13
TCOF1-208ENST00000506063 HIST1H2BDP58876 126 aa1.76□□□□□ -2.13
TCOF1-208ENST00000506063 HIST1H2BCP62807 126 aa1.76□□□□□ -2.13
TCOF1-208ENST00000506063 HIST2H2BEQ16778 126 aa1.76□□□□□ -2.13
TCOF1-208ENST00000506063 HIST2H2BFQ5QNW6 126 aaPredicted RBP1.76□□□□□ -2.13
TCOF1-208ENST00000506063 C9orf129Q5T035 196 aaKnown RBP1.76□□□□□ -2.13
TCOF1-208ENST00000506063 COPS9Q8WXC6 57 aa1.76□□□□□ -2.13
TCOF1-208ENST00000506063 HIST1H2BHQ93079 126 aa1.76□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 98.5 ms