RNA–Protein interactions for RNA: ENST00000505065.1

CDC42SE2-208, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE2, Length 4,352 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-208ENST00000505065 LINC01620Q4KN68 170 aa5.15□□□□□ -1.59
CDC42SE2-208ENST00000505065 Q6ZVH6 145 aa5.15□□□□□ -1.59
CDC42SE2-208ENST00000505065 KRTAP11-1Q8IUC1 163 aa5.15□□□□□ -1.59
CDC42SE2-208ENST00000505065 SERTAD4-AS1Q5TG53 156 aa5.14□□□□□ -1.59
CDC42SE2-208ENST00000505065 SOSTDC1Q6X4U4 206 aa5.14□□□□□ -1.59
CDC42SE2-208ENST00000505065 A0A087WYN8 130 aa5.14□□□□□ -1.59
CDC42SE2-208ENST00000505065 KRTAP4-16G5E9R7 235 aaPredicted RBP5.14□□□□□ -1.59
CDC42SE2-208ENST00000505065 CHTF8P0CG12 524 aa5.14□□□□□ -1.59
CDC42SE2-208ENST00000505065 SPRR1AP35321 89 aa5.14□□□□□ -1.59
CDC42SE2-208ENST00000505065 TRBV10-2A0A0K0K1G8 114 aa5.13□□□□□ -1.59
CDC42SE2-208ENST00000505065 C2orf91Q6ZV80 131 aa5.13□□□□□ -1.59
CDC42SE2-208ENST00000505065 SRSF9Q13242 221 aaKnown RBP eCLIP5.13□□□□□ -1.59
CDC42SE2-208ENST00000505065 EIF4EBP3O60516 100 aaPredicted RBP5.13□□□□□ -1.59
CDC42SE2-208ENST00000505065 FAM168BA1KXE4 195 aa5.12□□□□□ -1.59
CDC42SE2-208ENST00000505065 PCP2Q8IVA1 136 aa5.12□□□□□ -1.59
CDC42SE2-208ENST00000505065 SMIM6P0DI80 62 aa5.12□□□□□ -1.59
CDC42SE2-208ENST00000505065 PRR3P79522 188 aaKnown RBP5.11□□□□□ -1.59
CDC42SE2-208ENST00000505065 IGLV6-57P01721 117 aa5.11□□□□□ -1.59
CDC42SE2-208ENST00000505065 SMIM13P0DJ93 91 aa5.11□□□□□ -1.59
CDC42SE2-208ENST00000505065 MYCBP2O75592 4640 aa5.11□□□□□ -1.59
CDC42SE2-208ENST00000505065 H0Y8G0 127 aa5.11□□□□□ -1.59
CDC42SE2-208ENST00000505065 LGALS3P17931 250 aaKnown RBP5.11□□□□□ -1.59
CDC42SE2-208ENST00000505065 PCLOQ9Y6V0 5065 aa5.11□□□□□ -1.59
CDC42SE2-208ENST00000505065 IGLV1-50A0A075B6I6 118 aa5.1□□□□□ -1.59
CDC42SE2-208ENST00000505065 IFITM1P13164 125 aa5.1□□□□□ -1.59
CDC42SE2-208ENST00000505065 ATOH7Q8N100 152 aa5.1□□□□□ -1.59
CDC42SE2-208ENST00000505065 TOMM7Q9P0U1 55 aa5.1□□□□□ -1.59
CDC42SE2-208ENST00000505065 IGKV2-28A0A075B6P5 120 aa5.1□□□□□ -1.59
CDC42SE2-208ENST00000505065 H0Y9J4 135 aa5.1□□□□□ -1.59
CDC42SE2-208ENST00000505065 IGKV2D-28P01615 120 aa5.1□□□□□ -1.59
CDC42SE2-208ENST00000505065 LINC00308Q8TCZ7 52 aa5.1□□□□□ -1.59
CDC42SE2-208ENST00000505065 KRTAP4-5Q9BYR2 181 aa5.1□□□□□ -1.59
CDC42SE2-208ENST00000505065 TTTY13Q9BZ97 58 aa5.1□□□□□ -1.59
CDC42SE2-208ENST00000505065 KCNQ1DNQ9H478 68 aa5.09□□□□□ -1.59
CDC42SE2-208ENST00000505065 A0A1B0GV90 55 aa5.09□□□□□ -1.59
CDC42SE2-208ENST00000505065 MIR7-3HGQ8N6C7 128 aa5.09□□□□□ -1.59
CDC42SE2-208ENST00000505065 C22orf24Q9Y442 160 aa5.09□□□□□ -1.59
CDC42SE2-208ENST00000505065 ZNF815PA8K554 130 aa5.09□□□□□ -1.59
CDC42SE2-208ENST00000505065 RPL18AQ02543 176 aaKnown RBP5.09□□□□□ -1.6
CDC42SE2-208ENST00000505065 TAL2Q16559 108 aa5.08□□□□□ -1.6
CDC42SE2-208ENST00000505065 SCGB1D1O95968 90 aa5.08□□□□□ -1.6
CDC42SE2-208ENST00000505065 MEIG1Q5JSS6 88 aa5.08□□□□□ -1.6
CDC42SE2-208ENST00000505065 MRPL55Q7Z7F7 128 aaKnown RBP5.08□□□□□ -1.6
CDC42SE2-208ENST00000505065 SPATA45Q537H7 98 aa5.07□□□□□ -1.6
CDC42SE2-208ENST00000505065 LINC00528Q8N1L1 170 aa5.07□□□□□ -1.6
CDC42SE2-208ENST00000505065 C7orf33Q8WU49 177 aa5.07□□□□□ -1.6
CDC42SE2-208ENST00000505065 A0A1B0GWB2 263 aa5.07□□□□□ -1.6
CDC42SE2-208ENST00000505065 PCP4P48539 62 aa5.07□□□□□ -1.6
CDC42SE2-208ENST00000505065 TMEM238C9JI98 176 aa5.07□□□□□ -1.6
CDC42SE2-208ENST00000505065 M0R378 163 aa5.07□□□□□ -1.6
CDC42SE2-208ENST00000505065 GAGE2BQ13066 116 aa5.07□□□□□ -1.6
CDC42SE2-208ENST00000505065 HNRNPA3P51991 378 aaKnown RBP5.06□□□□□ -1.6
CDC42SE2-208ENST00000505065 PHF5AQ7RTV0 110 aaKnown RBP5.06□□□□□ -1.6
CDC42SE2-208ENST00000505065 LINC00167Q96N53 147 aa5.06□□□□□ -1.6
CDC42SE2-208ENST00000505065 VAMP8Q9BV40 100 aa5.06□□□□□ -1.6
CDC42SE2-208ENST00000505065 M0QXV9 152 aa5.06□□□□□ -1.6
CDC42SE2-208ENST00000505065 PRYO14603 147 aa5.06□□□□□ -1.6
CDC42SE2-208ENST00000505065 LINC00337Q8N6G1 96 aa5.06□□□□□ -1.6
CDC42SE2-208ENST00000505065 TRBV7-6A0A0J9YX20 115 aa5.05□□□□□ -1.6
CDC42SE2-208ENST00000505065 LBHQ53QV2 105 aaPredicted RBP5.05□□□□□ -1.6
CDC42SE2-208ENST00000505065 Q5VSD8 79 aa5.05□□□□□ -1.6
CDC42SE2-208ENST00000505065 XAGE1AQ9HD64 81 aa5.05□□□□□ -1.6
CDC42SE2-208ENST00000505065 PSORS1C2Q9UIG4 136 aa5.05□□□□□ -1.6
CDC42SE2-208ENST00000505065 LRP1Q07954 4544 aaKnown RBP5.05□□□□□ -1.6
CDC42SE2-208ENST00000505065 RPL24P83731 157 aaKnown RBP5.05□□□□□ -1.6
CDC42SE2-208ENST00000505065 GAGE2EQ4V326 116 aa5.04□□□□□ -1.6
CDC42SE2-208ENST00000505065 GAGE2DQ9UEU5 116 aa5.04□□□□□ -1.6
CDC42SE2-208ENST00000505065 PFN2P35080 140 aa5.04□□□□□ -1.6
CDC42SE2-208ENST00000505065 IGKV2-24A0A0C4DH68 120 aa5.04□□□□□ -1.6
CDC42SE2-208ENST00000505065 HSBP1L1C9JCN9 74 aa5.04□□□□□ -1.6
CDC42SE2-208ENST00000505065 SRRM2Q9UQ35 2752 aaKnown RBP5.03□□□□□ -1.6
CDC42SE2-208ENST00000505065 LINC00158P58513 81 aa5.03□□□□□ -1.6
CDC42SE2-208ENST00000505065 COPS9Q8WXC6 57 aa5.03□□□□□ -1.6
CDC42SE2-208ENST00000505065 BCE1O60756 84 aa5.03□□□□□ -1.6
CDC42SE2-208ENST00000505065 KRTAP1-4P0C5Y4 121 aa5.03□□□□□ -1.6
CDC42SE2-208ENST00000505065 SLC25A34Q6PIV7 304 aa5.03□□□□□ -1.6
CDC42SE2-208ENST00000505065 RPL37AP61513 92 aaKnown RBP5.02□□□□□ -1.61
CDC42SE2-208ENST00000505065 SPINK6Q6UWN8 80 aa5.02□□□□□ -1.61
CDC42SE2-208ENST00000505065 PAM16Q9Y3D7 125 aa5.02□□□□□ -1.61
CDC42SE2-208ENST00000505065 PLA2G1BP04054 148 aaKnown RBP5.02□□□□□ -1.61
CDC42SE2-208ENST00000505065 IGLV7-43P04211 117 aa5.02□□□□□ -1.61
CDC42SE2-208ENST00000505065 FAM19A5Q7Z5A7 132 aaPredicted RBP5.02□□□□□ -1.61
CDC42SE2-208ENST00000505065 MUSTN1Q8IVN3 82 aa5.02□□□□□ -1.61
CDC42SE2-208ENST00000505065 DAND5Q8N907 189 aa5.02□□□□□ -1.61
CDC42SE2-208ENST00000505065 C14orf144Q96I85 54 aa5.02□□□□□ -1.61
CDC42SE2-208ENST00000505065 A0A0B4J2C4 111 aa5.02□□□□□ -1.61
CDC42SE2-208ENST00000505065 B5MCH6 92 aa5.02□□□□□ -1.61
CDC42SE2-208ENST00000505065 MIEN1Q9BRT3 115 aa5.02□□□□□ -1.61
CDC42SE2-208ENST00000505065 KRTAP29-1A8MX34 341 aaPredicted RBP5.01□□□□□ -1.61
CDC42SE2-208ENST00000505065 HAMPP81172 84 aa5.01□□□□□ -1.61
CDC42SE2-208ENST00000505065 LINC00483Q53H64 154 aa5.01□□□□□ -1.61
CDC42SE2-208ENST00000505065 UQCR10Q9UDW1 63 aa5.01□□□□□ -1.61
CDC42SE2-208ENST00000505065 CEND1Q8N111 149 aa5□□□□□ -1.61
CDC42SE2-208ENST00000505065 CBY1Q9Y3M2 126 aa5□□□□□ -1.61
CDC42SE2-208ENST00000505065 TMEM126AQ9H061 195 aa5□□□□□ -1.61
CDC42SE2-208ENST00000505065 TRBV10-3A0A0K0K1G6 114 aa5□□□□□ -1.61
CDC42SE2-208ENST00000505065 MT1HL1P0DM35 61 aa5□□□□□ -1.61
CDC42SE2-208ENST00000505065 FAM229AH3BQW9 127 aa4.99□□□□□ -1.61
CDC42SE2-208ENST00000505065 REG3GQ6UW15 175 aa4.99□□□□□ -1.61
CDC42SE2-208ENST00000505065 ZNF861PO60384 105 aa4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 87.6 ms