RNA–Protein interactions for RNA: ENST00000505005.5

NR1I3-220, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 985 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-220ENST00000505005 OXTP01178 125 aa6.21□□□□□ -1.42
NR1I3-220ENST00000505005 NMUP48645 174 aa6.21□□□□□ -1.42
NR1I3-220ENST00000505005 RPL24P83731 157 aaKnown RBP6.21□□□□□ -1.42
NR1I3-220ENST00000505005 C10orf25Q5T742 122 aa6.21□□□□□ -1.42
NR1I3-220ENST00000505005 TP73-AS1Q9UF72 201 aa6.21□□□□□ -1.42
NR1I3-220ENST00000505005 PLA2G2DQ9UNK4 145 aa6.21□□□□□ -1.42
NR1I3-220ENST00000505005 MYMXA0A1B0GTQ4 84 aa6.2□□□□□ -1.42
NR1I3-220ENST00000505005 PANO1I0J062 215 aa6.2□□□□□ -1.42
NR1I3-220ENST00000505005 LEPROTO15243 131 aa6.2□□□□□ -1.42
NR1I3-220ENST00000505005 HAMPP81172 84 aa6.2□□□□□ -1.42
NR1I3-220ENST00000505005 PRO1933Q9H354 126 aa6.2□□□□□ -1.42
NR1I3-220ENST00000505005 HIGD1BQ9P298 99 aa6.2□□□□□ -1.42
NR1I3-220ENST00000505005 HSPG2P98160 4391 aa6.2□□□□□ -1.42
NR1I3-220ENST00000505005 APOBP04114 4563 aaKnown RBP6.2□□□□□ -1.42
NR1I3-220ENST00000505005 SPINK6Q6UWN8 80 aa6.19□□□□□ -1.42
NR1I3-220ENST00000505005 IGKV2D-26A0A0A0MRZ7 120 aa6.18□□□□□ -1.42
NR1I3-220ENST00000505005 J3QQQ9 107 aa6.18□□□□□ -1.42
NR1I3-220ENST00000505005 HNRNPA3P51991 378 aaKnown RBP6.18□□□□□ -1.42
NR1I3-220ENST00000505005 UBE2BP63146 152 aa6.18□□□□□ -1.42
NR1I3-220ENST00000505005 C21orf62-AS1Q17RA5 79 aa6.18□□□□□ -1.42
NR1I3-220ENST00000505005 REG3GQ6UW15 175 aa6.18□□□□□ -1.42
NR1I3-220ENST00000505005 C14orf144Q96I85 54 aa6.18□□□□□ -1.42
NR1I3-220ENST00000505005 ERG28Q9UKR5 140 aa6.18□□□□□ -1.42
NR1I3-220ENST00000505005 M0QXV9 152 aa6.17□□□□□ -1.42
NR1I3-220ENST00000505005 LGALS3P17931 250 aaKnown RBP6.17□□□□□ -1.42
NR1I3-220ENST00000505005 NKAPP1Q8N9T2 125 aa6.17□□□□□ -1.42
NR1I3-220ENST00000505005 DNAH8Q96JB1 4490 aa6.17□□□□□ -1.42
NR1I3-220ENST00000505005 A0A1W2PNN7 141 aa6.16□□□□□ -1.42
NR1I3-220ENST00000505005 PCP4L1A6NKN8 68 aa6.16□□□□□ -1.42
NR1I3-220ENST00000505005 KRTAP29-1A8MX34 341 aaPredicted RBP6.16□□□□□ -1.42
NR1I3-220ENST00000505005 PRR3P79522 188 aaKnown RBP6.16□□□□□ -1.42
NR1I3-220ENST00000505005 TAL2Q16559 108 aa6.16□□□□□ -1.42
NR1I3-220ENST00000505005 KRTAP4-5Q9BYR2 181 aa6.16□□□□□ -1.42
NR1I3-220ENST00000505005 CBY1Q9Y3M2 126 aa6.16□□□□□ -1.42
NR1I3-220ENST00000505005 ZNF815PA8K554 130 aa6.15□□□□□ -1.42
NR1I3-220ENST00000505005 M0R143 59 aa6.15□□□□□ -1.42
NR1I3-220ENST00000505005 PFN2P35080 140 aa6.15□□□□□ -1.42
NR1I3-220ENST00000505005 LINC00158P58513 81 aa6.15□□□□□ -1.42
NR1I3-220ENST00000505005 MEIG1Q5JSS6 88 aa6.15□□□□□ -1.42
NR1I3-220ENST00000505005 C2orf91Q6ZV80 131 aa6.15□□□□□ -1.42
NR1I3-220ENST00000505005 FAM19A5Q7Z5A7 132 aaPredicted RBP6.15□□□□□ -1.42
NR1I3-220ENST00000505005 MRPL55Q7Z7F7 128 aaKnown RBP6.15□□□□□ -1.42
NR1I3-220ENST00000505005 PCP2Q8IVA1 136 aa6.15□□□□□ -1.42
NR1I3-220ENST00000505005 NDUFA12Q9UI09 145 aa6.15□□□□□ -1.42
NR1I3-220ENST00000505005 IGLV5-37A0A075B6J1 123 aa6.14□□□□□ -1.43
NR1I3-220ENST00000505005 TIMM17BO60830 172 aa6.14□□□□□ -1.43
NR1I3-220ENST00000505005 HSD52Q0P140 79 aa6.14□□□□□ -1.43
NR1I3-220ENST00000505005 C9orf129Q5T035 196 aaKnown RBP6.14□□□□□ -1.43
NR1I3-220ENST00000505005 Q6ZVH6 145 aa6.14□□□□□ -1.43
NR1I3-220ENST00000505005 COPS9Q8WXC6 57 aa6.14□□□□□ -1.43
NR1I3-220ENST00000505005 DIRC1Q969H9 104 aa6.14□□□□□ -1.43
NR1I3-220ENST00000505005 ZNF625Q96I27 306 aaPredicted RBP6.14□□□□□ -1.43
NR1I3-220ENST00000505005 PPDPFQ9H3Y8 114 aa6.14□□□□□ -1.43
NR1I3-220ENST00000505005 SPANXB1Q9NS25 103 aaPredicted RBP6.14□□□□□ -1.43
NR1I3-220ENST00000505005 C22orf24Q9Y442 160 aa6.14□□□□□ -1.43
NR1I3-220ENST00000505005 TSPEAR-AS2P59090 65 aa6.13□□□□□ -1.43
NR1I3-220ENST00000505005 KRTAP10-4P60372 401 aaPredicted RBP6.13□□□□□ -1.43
NR1I3-220ENST00000505005 C1orf137Q5JT78 98 aa6.13□□□□□ -1.43
NR1I3-220ENST00000505005 PHF5AQ7RTV0 110 aaKnown RBP6.13□□□□□ -1.43
NR1I3-220ENST00000505005 XAGE1AQ9HD64 81 aa6.13□□□□□ -1.43
NR1I3-220ENST00000505005 SRRM2Q9UQ35 2752 aaKnown RBP6.13□□□□□ -1.43
NR1I3-220ENST00000505005 A0A0J9YXY3 114 aa6.12□□□□□ -1.43
NR1I3-220ENST00000505005 TMEM238C9JI98 176 aa6.12□□□□□ -1.43
NR1I3-220ENST00000505005 SCGB1D4Q6XE38 83 aa6.12□□□□□ -1.43
NR1I3-220ENST00000505005 PSORS1C2Q9UIG4 136 aa6.12□□□□□ -1.43
NR1I3-220ENST00000505005 VPS13BQ7Z7G8 4022 aa6.12□□□□□ -1.43
NR1I3-220ENST00000505005 CTAG1AP78358 180 aa6.11□□□□□ -1.43
NR1I3-220ENST00000505005 SND1-IT1Q9HBX3 110 aa6.11□□□□□ -1.43
NR1I3-220ENST00000505005 FAM168BA1KXE4 195 aa6.1□□□□□ -1.43
NR1I3-220ENST00000505005 IGLV7-43P04211 117 aa6.1□□□□□ -1.43
NR1I3-220ENST00000505005 RPL28P46779 137 aaKnown RBP6.1□□□□□ -1.43
NR1I3-220ENST00000505005 TTTY13Q9BZ97 58 aa6.1□□□□□ -1.43
NR1I3-220ENST00000505005 LOC107984156A0A0G2JMH3 177 aa6.09□□□□□ -1.43
NR1I3-220ENST00000505005 M0R378 163 aa6.09□□□□□ -1.43
NR1I3-220ENST00000505005 IFITM1P13164 125 aa6.09□□□□□ -1.43
NR1I3-220ENST00000505005 SRSF9Q13242 221 aaKnown RBP eCLIP6.09□□□□□ -1.43
NR1I3-220ENST00000505005 ARL17AQ8IVW1 177 aa6.09□□□□□ -1.43
NR1I3-220ENST00000505005 SPANXDQ9BXN6 97 aa6.09□□□□□ -1.43
NR1I3-220ENST00000505005 SPANXCQ9NY87 97 aa6.09□□□□□ -1.43
NR1I3-220ENST00000505005 ZNF861PO60384 105 aa6.08□□□□□ -1.44
NR1I3-220ENST00000505005 SMIM13P0DJ93 91 aa6.08□□□□□ -1.44
NR1I3-220ENST00000505005 BVES-AS1Q5T3Y7 98 aa6.08□□□□□ -1.44
NR1I3-220ENST00000505005 SERTAD4-AS1Q5TG53 156 aa6.08□□□□□ -1.44
NR1I3-220ENST00000505005 LINC00167Q96N53 147 aa6.08□□□□□ -1.44
NR1I3-220ENST00000505005 HIST1H4GQ99525 98 aa6.08□□□□□ -1.44
NR1I3-220ENST00000505005 SNHG12Q9BXW3 62 aa6.08□□□□□ -1.44
NR1I3-220ENST00000505005 KRTAP17-1Q9BYP8 105 aa6.08□□□□□ -1.44
NR1I3-220ENST00000505005 TRBV10-2A0A0K0K1G8 114 aa6.07□□□□□ -1.44
NR1I3-220ENST00000505005 A6NDN8 102 aa6.07□□□□□ -1.44
NR1I3-220ENST00000505005 BCE1O60756 84 aa6.07□□□□□ -1.44
NR1I3-220ENST00000505005 NDUFC2O95298 119 aa6.07□□□□□ -1.44
NR1I3-220ENST00000505005 CEND1Q8N111 149 aa6.07□□□□□ -1.44
NR1I3-220ENST00000505005 MIR7-3HGQ8N6C7 128 aa6.07□□□□□ -1.44
NR1I3-220ENST00000505005 LINC01600Q96MT4 127 aa6.07□□□□□ -1.44
NR1I3-220ENST00000505005 LITAFQ99732 161 aa6.07□□□□□ -1.44
NR1I3-220ENST00000505005 PCLOQ9Y6V0 5065 aa6.06□□□□□ -1.44
NR1I3-220ENST00000505005 H0Y9J4 135 aa6.06□□□□□ -1.44
NR1I3-220ENST00000505005 VPREB1P12018 145 aa6.06□□□□□ -1.44
NR1I3-220ENST00000505005 RPL13AP40429 203 aaKnown RBP6.06□□□□□ -1.44
NR1I3-220ENST00000505005 COL5A1-AS1Q5SY13 56 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms