RNA–Protein interactions for RNA: ENST00000504974.1

RFC1-209, Transcript of replication factor C subunit 1, humanhuman

TSL 5

Gene RFC1, Length 495 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-209ENST00000504974 SMIM15Q7Z3B0 74 aa1.43□□□□□ -2.18
RFC1-209ENST00000504974 NIT1Q86X76 327 aa1.43□□□□□ -2.18
RFC1-209ENST00000504974 C3orf22Q8N5N4 141 aa1.43□□□□□ -2.18
RFC1-209ENST00000504974 Q8N814 137 aa1.43□□□□□ -2.18
RFC1-209ENST00000504974 TSKUQ8WUA8 353 aa1.43□□□□□ -2.18
RFC1-209ENST00000504974 DNAJC30Q96LL9 226 aa1.43□□□□□ -2.18
RFC1-209ENST00000504974 RNASE7Q9H1E1 156 aaKnown RBP1.43□□□□□ -2.18
RFC1-209ENST00000504974 SMDT1Q9H4I9 107 aa1.43□□□□□ -2.18
RFC1-209ENST00000504974 PKHD1L1Q86WI1 4243 aa1.42□□□□□ -2.18
RFC1-209ENST00000504974 TRAV26-2A0A0B4J265 109 aa1.42□□□□□ -2.18
RFC1-209ENST00000504974 HIGD1CA8MV81 97 aa1.42□□□□□ -2.18
RFC1-209ENST00000504974 TMEM262E9PQX1 116 aa1.42□□□□□ -2.18
RFC1-209ENST00000504974 UBE2L6O14933 153 aa1.42□□□□□ -2.18
RFC1-209ENST00000504974 NCR2O95944 276 aa1.42□□□□□ -2.18
RFC1-209ENST00000504974 ANGP03950 147 aaKnown RBP1.42□□□□□ -2.18
RFC1-209ENST00000504974 FUSP35637 526 aaKnown RBP eCLIP1.42□□□□□ -2.18
RFC1-209ENST00000504974 FOXA3P55318 350 aaPredicted RBP1.42□□□□□ -2.18
RFC1-209ENST00000504974 RAB14P61106 215 aa1.42□□□□□ -2.18
RFC1-209ENST00000504974 HAMPP81172 84 aa1.42□□□□□ -2.18
RFC1-209ENST00000504974 COTL1Q14019 142 aa1.42□□□□□ -2.18
RFC1-209ENST00000504974 ADIRFQ15847 76 aa1.42□□□□□ -2.18
RFC1-209ENST00000504974 MIAQ16674 131 aa1.42□□□□□ -2.18
RFC1-209ENST00000504974 NIT2Q9NQR4 276 aa1.42□□□□□ -2.18
RFC1-209ENST00000504974 OSTCQ9NRP0 149 aa1.42□□□□□ -2.18
RFC1-209ENST00000504974 NAT8Q9UHE5 227 aa1.42□□□□□ -2.18
RFC1-209ENST00000504974 NAT8BQ9UHF3 227 aa1.42□□□□□ -2.18
RFC1-209ENST00000504974 V9GYV3 84 aa1.42□□□□□ -2.18
RFC1-209ENST00000504974 LRP1Q07954 4544 aaKnown RBP1.41□□□□□ -2.18
RFC1-209ENST00000504974 TRBV6-5A0A0K0K1A5 114 aa1.41□□□□□ -2.18
RFC1-209ENST00000504974 A0A1B0GUT8 65 aa1.41□□□□□ -2.18
RFC1-209ENST00000504974 A0A1W2PNM2 257 aa1.41□□□□□ -2.18
RFC1-209ENST00000504974 SMIM27A0A1W2PRY6 76 aa1.41□□□□□ -2.18
RFC1-209ENST00000504974 I3L3M4 83 aa1.41□□□□□ -2.18
RFC1-209ENST00000504974 LECT2O14960 151 aa1.41□□□□□ -2.18
RFC1-209ENST00000504974 PPP1R17O96001 155 aa1.41□□□□□ -2.18
RFC1-209ENST00000504974 S100A8P05109 93 aa1.41□□□□□ -2.18
RFC1-209ENST00000504974 ZNF25P17030 456 aaPredicted RBP1.41□□□□□ -2.18
RFC1-209ENST00000504974 HBBP68871 147 aa1.41□□□□□ -2.18
RFC1-209ENST00000504974 WFDC2Q14508 124 aa1.41□□□□□ -2.18
RFC1-209ENST00000504974 CLLU1Q5K131 121 aa1.41□□□□□ -2.18
RFC1-209ENST00000504974 CLPSL2Q6UWE3 100 aa1.41□□□□□ -2.18
RFC1-209ENST00000504974 ENHOQ6UWT2 76 aa1.41□□□□□ -2.18
RFC1-209ENST00000504974 Q6ZSA8 131 aa1.41□□□□□ -2.18
RFC1-209ENST00000504974 NUP35Q8NFH5 326 aa1.41□□□□□ -2.18
RFC1-209ENST00000504974 ZCCHC13Q8WW36 166 aaKnown RBP1.41□□□□□ -2.18
RFC1-209ENST00000504974 RPL39LQ96EH5 51 aaKnown RBP1.41□□□□□ -2.18
RFC1-209ENST00000504974 MRAP2Q96G30 205 aa1.41□□□□□ -2.18
RFC1-209ENST00000504974 TMEM70Q9BUB7 260 aa1.41□□□□□ -2.18
RFC1-209ENST00000504974 TMEM191AQ9H0A3 160 aa1.41□□□□□ -2.18
RFC1-209ENST00000504974 TRBV24-1A0A075B6N3 115 aa1.4□□□□□ -2.19
RFC1-209ENST00000504974 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.4□□□□□ -2.19
RFC1-209ENST00000504974 TRBV27A0A0K0K1C4 114 aa1.4□□□□□ -2.19
RFC1-209ENST00000504974 IGKV2-29A2NJV5 120 aaPredicted RBP1.4□□□□□ -2.19
RFC1-209ENST00000504974 C7orf77A4D0Y5 90 aa1.4□□□□□ -2.19
RFC1-209ENST00000504974 F8W036 122 aa1.4□□□□□ -2.19
RFC1-209ENST00000504974 ZNF73O43830 326 aaPredicted RBP1.4□□□□□ -2.19
RFC1-209ENST00000504974 FGF6P10767 208 aa1.4□□□□□ -2.19
RFC1-209ENST00000504974 ZNF22P17026 224 aaPredicted RBP1.4□□□□□ -2.19
RFC1-209ENST00000504974 FCER1GP30273 86 aa1.4□□□□□ -2.19
RFC1-209ENST00000504974 SMAGPQ0VAQ4 97 aa1.4□□□□□ -2.19
RFC1-209ENST00000504974 MRPL54Q6P161 138 aaKnown RBP1.4□□□□□ -2.19
RFC1-209ENST00000504974 KRTAP26-1Q6PEX3 210 aa1.4□□□□□ -2.19
RFC1-209ENST00000504974 ATP5L2Q7Z4Y8 100 aa1.4□□□□□ -2.19
RFC1-209ENST00000504974 MRPL52Q86TS9 123 aaKnown RBP1.4□□□□□ -2.19
RFC1-209ENST00000504974 LINC00269Q8N2A0 174 aa1.4□□□□□ -2.19
RFC1-209ENST00000504974 OR5A1Q8NGJ0 315 aa1.4□□□□□ -2.19
RFC1-209ENST00000504974 OR10D4PQ8NGN7 298 aa1.4□□□□□ -2.19
RFC1-209ENST00000504974 BTF3L4Q96K17 158 aa1.4□□□□□ -2.19
RFC1-209ENST00000504974 SMIM2Q9BVW6 85 aa1.4□□□□□ -2.19
RFC1-209ENST00000504974 ST20Q9HBF5 79 aa1.4□□□□□ -2.19
RFC1-209ENST00000504974 TMEM242Q9NWH2 141 aa1.4□□□□□ -2.19
RFC1-209ENST00000504974 CRCT1Q9UGL9 99 aa1.4□□□□□ -2.19
RFC1-209ENST00000504974 FSIP2Q5CZC0 6907 aa1.4□□□□□ -2.19
RFC1-209ENST00000504974 GVQW2A0A096LPI5 108 aaPredicted RBP1.39□□□□□ -2.19
RFC1-209ENST00000504974 TRAV16A0A0A6YYK6 109 aaPredicted RBP1.39□□□□□ -2.19
RFC1-209ENST00000504974 IGKV3OR2-268A0A0C4DH90 116 aa1.39□□□□□ -2.19
RFC1-209ENST00000504974 A0A1B0GU33 70 aa1.39□□□□□ -2.19
RFC1-209ENST00000504974 LINC00862A6NCI5 91 aa1.39□□□□□ -2.19
RFC1-209ENST00000504974 D6R8Y8 96 aa1.39□□□□□ -2.19
RFC1-209ENST00000504974 PPBPP02775 128 aa1.39□□□□□ -2.19
RFC1-209ENST00000504974 MT-ND4LP03901 98 aa1.39□□□□□ -2.19
RFC1-209ENST00000504974 ESDP10768 282 aa1.39□□□□□ -2.19
RFC1-209ENST00000504974 ADCYAP1P18509 176 aa1.39□□□□□ -2.19
RFC1-209ENST00000504974 CKS2P33552 79 aa1.39□□□□□ -2.19
RFC1-209ENST00000504974 POLR2KP53803 58 aaKnown RBP1.39□□□□□ -2.19
RFC1-209ENST00000504974 CNBPP62633 177 aaKnown RBP1.39□□□□□ -2.19
RFC1-209ENST00000504974 IFITM2Q01629 132 aa1.39□□□□□ -2.19
RFC1-209ENST00000504974 KRTAP6-3Q3LI67 103 aa1.39□□□□□ -2.19
RFC1-209ENST00000504974 MRPL51Q4U2R6 128 aaKnown RBP1.39□□□□□ -2.19
RFC1-209ENST00000504974 Q6ZUT4 128 aa1.39□□□□□ -2.19
RFC1-209ENST00000504974 SCXQ7RTU7 201 aa1.39□□□□□ -2.19
RFC1-209ENST00000504974 FAM19A3Q7Z5A8 133 aa1.39□□□□□ -2.19
RFC1-209ENST00000504974 COMMD7Q86VX2 200 aa1.39□□□□□ -2.19
RFC1-209ENST00000504974 IMMP2LQ96T52 175 aa1.39□□□□□ -2.19
RFC1-209ENST00000504974 C20orf78Q9BR46 151 aa1.39□□□□□ -2.19
RFC1-209ENST00000504974 SPANXA1Q9NS26 97 aa1.39□□□□□ -2.19
RFC1-209ENST00000504974 PKIGQ9Y2B9 76 aa1.39□□□□□ -2.19
RFC1-209ENST00000504974 LAMTOR2Q9Y2Q5 125 aa1.39□□□□□ -2.19
RFC1-209ENST00000504974 UBE2D4Q9Y2X8 147 aa1.39□□□□□ -2.19
RFC1-209ENST00000504974 FAT4Q6V0I7 4981 aa1.39□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms