RNA–Protein interactions for RNA: ENST00000504380.1

PDLIM7-212, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-212ENST00000504380 ADAMTSL4-AS1Q5T5F5 129 aa8.32□□□□□ -1.08
PDLIM7-212ENST00000504380 LINC00528Q8N1L1 170 aa8.32□□□□□ -1.08
PDLIM7-212ENST00000504380 Q8N1X5 172 aa8.32□□□□□ -1.08
PDLIM7-212ENST00000504380 Q8NDZ9 215 aa8.32□□□□□ -1.08
PDLIM7-212ENST00000504380 TP73-AS1Q9UF72 201 aa8.32□□□□□ -1.08
PDLIM7-212ENST00000504380 EPM2AB3EWF7 344 aa8.31□□□□□ -1.08
PDLIM7-212ENST00000504380 NPC2P61916 151 aa8.3□□□□□ -1.08
PDLIM7-212ENST00000504380 PAM16Q9Y3D7 125 aa8.3□□□□□ -1.08
PDLIM7-212ENST00000504380 LINC00587B1AMM8 73 aa8.29□□□□□ -1.08
PDLIM7-212ENST00000504380 M0QXV9 152 aa8.29□□□□□ -1.08
PDLIM7-212ENST00000504380 SPATA45Q537H7 98 aa8.29□□□□□ -1.08
PDLIM7-212ENST00000504380 LITAFQ99732 161 aa8.29□□□□□ -1.08
PDLIM7-212ENST00000504380 C22orf24Q9Y442 160 aa8.29□□□□□ -1.08
PDLIM7-212ENST00000504380 EIF4EBP3O60516 100 aaPredicted RBP8.28□□□□□ -1.08
PDLIM7-212ENST00000504380 SCGB1D4Q6XE38 83 aa8.28□□□□□ -1.08
PDLIM7-212ENST00000504380 KRTAP11-1Q8IUC1 163 aa8.28□□□□□ -1.08
PDLIM7-212ENST00000504380 VAMP8Q9BV40 100 aa8.28□□□□□ -1.08
PDLIM7-212ENST00000504380 GAGE10A6NGK3 116 aa8.27□□□□□ -1.09
PDLIM7-212ENST00000504380 VPREB1P12018 145 aa8.27□□□□□ -1.09
PDLIM7-212ENST00000504380 PRR3P79522 188 aaKnown RBP8.27□□□□□ -1.09
PDLIM7-212ENST00000504380 Q5VSD8 79 aa8.27□□□□□ -1.09
PDLIM7-212ENST00000504380 SOSTDC1Q6X4U4 206 aa8.27□□□□□ -1.09
PDLIM7-212ENST00000504380 C14orf144Q96I85 54 aa8.27□□□□□ -1.09
PDLIM7-212ENST00000504380 BOD1L2Q8IYS8 172 aa8.26□□□□□ -1.09
PDLIM7-212ENST00000504380 C7orf33Q8WU49 177 aa8.26□□□□□ -1.09
PDLIM7-212ENST00000504380 PLA2G2DQ9UNK4 145 aa8.26□□□□□ -1.09
PDLIM7-212ENST00000504380 LOC105371267A0A1B0GV96 52 aa8.25□□□□□ -1.09
PDLIM7-212ENST00000504380 FAM229AH3BQW9 127 aa8.25□□□□□ -1.09
PDLIM7-212ENST00000504380 TIMM17BO60830 172 aa8.25□□□□□ -1.09
PDLIM7-212ENST00000504380 RPL37AP61513 92 aaKnown RBP8.25□□□□□ -1.09
PDLIM7-212ENST00000504380 NKAPP1Q8N9T2 125 aa8.25□□□□□ -1.09
PDLIM7-212ENST00000504380 FAT1Q14517 4588 aa8.24□□□□□ -1.09
PDLIM7-212ENST00000504380 IGLV5-37A0A075B6J1 123 aa8.24□□□□□ -1.09
PDLIM7-212ENST00000504380 RPL37AP8A6NKH3 93 aa8.24□□□□□ -1.09
PDLIM7-212ENST00000504380 NCR3O14931 201 aa8.24□□□□□ -1.09
PDLIM7-212ENST00000504380 COX8AP10176 69 aa8.24□□□□□ -1.09
PDLIM7-212ENST00000504380 MRPL55Q7Z7F7 128 aaKnown RBP8.24□□□□□ -1.09
PDLIM7-212ENST00000504380 LINC00167Q96N53 147 aa8.24□□□□□ -1.09
PDLIM7-212ENST00000504380 UBE2BP63146 152 aa8.23□□□□□ -1.09
PDLIM7-212ENST00000504380 RPL24P83731 157 aaKnown RBP8.23□□□□□ -1.09
PDLIM7-212ENST00000504380 LINC00308Q8TCZ7 52 aa8.23□□□□□ -1.09
PDLIM7-212ENST00000504380 DMBT1Q9UGM3 2413 aaPredicted RBP8.22□□□□□ -1.09
PDLIM7-212ENST00000504380 KRTAP10-4P60372 401 aaPredicted RBP8.22□□□□□ -1.09
PDLIM7-212ENST00000504380 MIEN1Q9BRT3 115 aa8.22□□□□□ -1.09
PDLIM7-212ENST00000504380 LOC107984156A0A0G2JMH3 177 aa8.21□□□□□ -1.1
PDLIM7-212ENST00000504380 TMEM238C9JI98 176 aa8.21□□□□□ -1.1
PDLIM7-212ENST00000504380 LBHQ53QV2 105 aaPredicted RBP8.21□□□□□ -1.1
PDLIM7-212ENST00000504380 ARL17AQ8IVW1 177 aa8.21□□□□□ -1.1
PDLIM7-212ENST00000504380 SPANXDQ9BXN6 97 aa8.21□□□□□ -1.1
PDLIM7-212ENST00000504380 SPANXCQ9NY87 97 aa8.21□□□□□ -1.1
PDLIM7-212ENST00000504380 PSORS1C2Q9UIG4 136 aa8.21□□□□□ -1.1
PDLIM7-212ENST00000504380 UBR4Q5T4S7 5183 aa8.21□□□□□ -1.1
PDLIM7-212ENST00000504380 IGKV2-28A0A075B6P5 120 aa8.2□□□□□ -1.1
PDLIM7-212ENST00000504380 IGKV2D-28P01615 120 aa8.2□□□□□ -1.1
PDLIM7-212ENST00000504380 PLA2G1BP04054 148 aaKnown RBP8.2□□□□□ -1.1
PDLIM7-212ENST00000504380 MUSTN1Q8IVN3 82 aa8.2□□□□□ -1.1
PDLIM7-212ENST00000504380 M0R378 163 aa8.19□□□□□ -1.1
PDLIM7-212ENST00000504380 HNRNPA3P51991 378 aaKnown RBP8.19□□□□□ -1.1
PDLIM7-212ENST00000504380 DLEU1O43261 78 aa8.18□□□□□ -1.1
PDLIM7-212ENST00000504380 SRSF9Q13242 221 aaKnown RBP eCLIP8.18□□□□□ -1.1
PDLIM7-212ENST00000504380 C1orf137Q5JT78 98 aa8.18□□□□□ -1.1
PDLIM7-212ENST00000504380 SLC25A34Q6PIV7 304 aa8.18□□□□□ -1.1
PDLIM7-212ENST00000504380 IGLV1-50A0A075B6I6 118 aa8.16□□□□□ -1.1
PDLIM7-212ENST00000504380 INAFM2P0DMQ5 153 aa8.16□□□□□ -1.1
PDLIM7-212ENST00000504380 S100A12P80511 92 aa8.16□□□□□ -1.1
PDLIM7-212ENST00000504380 C2orf91Q6ZV80 131 aa8.16□□□□□ -1.1
PDLIM7-212ENST00000504380 SPANXB1Q9NS25 103 aaPredicted RBP8.16□□□□□ -1.1
PDLIM7-212ENST00000504380 TRBV10-3A0A0K0K1G6 114 aa8.15□□□□□ -1.1
PDLIM7-212ENST00000504380 NDUFC2O95298 119 aa8.15□□□□□ -1.1
PDLIM7-212ENST00000504380 IFITM1P13164 125 aa8.15□□□□□ -1.1
PDLIM7-212ENST00000504380 PRO1933Q9H354 126 aa8.15□□□□□ -1.1
PDLIM7-212ENST00000504380 Q6ZVH6 145 aa8.14□□□□□ -1.11
PDLIM7-212ENST00000504380 HIST1H4GQ99525 98 aa8.14□□□□□ -1.11
PDLIM7-212ENST00000504380 VPS13BQ7Z7G8 4022 aa8.14□□□□□ -1.11
PDLIM7-212ENST00000504380 SMIM6P0DI80 62 aa8.13□□□□□ -1.11
PDLIM7-212ENST00000504380 DDTP30046 118 aa8.13□□□□□ -1.11
PDLIM7-212ENST00000504380 MYCBP2O75592 4640 aa8.13□□□□□ -1.11
PDLIM7-212ENST00000504380 TRBV10-2A0A0K0K1G8 114 aa8.12□□□□□ -1.11
PDLIM7-212ENST00000504380 IGLV7-43P04211 117 aa8.12□□□□□ -1.11
PDLIM7-212ENST00000504380 S100A7L2Q5SY68 101 aa8.12□□□□□ -1.11
PDLIM7-212ENST00000504380 OR13C6PQ8NH95 151 aa8.12□□□□□ -1.11
PDLIM7-212ENST00000504380 HIGD1BQ9P298 99 aa8.12□□□□□ -1.11
PDLIM7-212ENST00000504380 REG3GQ6UW15 175 aa8.11□□□□□ -1.11
PDLIM7-212ENST00000504380 LINC00337Q8N6G1 96 aa8.11□□□□□ -1.11
PDLIM7-212ENST00000504380 COPS9Q8WXC6 57 aa8.11□□□□□ -1.11
PDLIM7-212ENST00000504380 TMEM126AQ9H061 195 aa8.11□□□□□ -1.11
PDLIM7-212ENST00000504380 SRRM2Q9UQ35 2752 aaKnown RBP8.1□□□□□ -1.11
PDLIM7-212ENST00000504380 A4D1N5 150 aa8.1□□□□□ -1.11
PDLIM7-212ENST00000504380 BCE1O60756 84 aa8.1□□□□□ -1.11
PDLIM7-212ENST00000504380 IGLV6-57P01721 117 aa8.1□□□□□ -1.11
PDLIM7-212ENST00000504380 C12orf57Q99622 126 aa8.1□□□□□ -1.11
PDLIM7-212ENST00000504380 UQCR10Q9UDW1 63 aa8.1□□□□□ -1.11
PDLIM7-212ENST00000504380 PPDPFQ9H3Y8 114 aa8.09□□□□□ -1.11
PDLIM7-212ENST00000504380 KCNQ1DNQ9H478 68 aa8.09□□□□□ -1.11
PDLIM7-212ENST00000504380 PRYO14603 147 aa8.08□□□□□ -1.12
PDLIM7-212ENST00000504380 FAM19A1Q7Z5A9 133 aa8.08□□□□□ -1.12
PDLIM7-212ENST00000504380 LINC00518Q8N0U6 118 aa8.08□□□□□ -1.12
PDLIM7-212ENST00000504380 PKHD1L1Q86WI1 4243 aa8.08□□□□□ -1.12
PDLIM7-212ENST00000504380 A6NDN8 102 aa8.07□□□□□ -1.12
PDLIM7-212ENST00000504380 UBE2AP49459 152 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 114.5 ms