RNA–Protein interactions for RNA: ENST00000498725.5

CCDC171-209, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 498 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-209ENST00000498725 C9JQL5 133 aa5.06□□□□□ -1.6
CCDC171-209ENST00000498725 CFC1BP0CG36 223 aa5.06□□□□□ -1.6
CCDC171-209ENST00000498725 LINC00310P59036 64 aa5.06□□□□□ -1.6
CCDC171-209ENST00000498725 PAPPA-AS1Q5QFB9 102 aa5.06□□□□□ -1.6
CCDC171-209ENST00000498725 KRTAP5-3Q6L8H2 238 aa5.06□□□□□ -1.6
CCDC171-209ENST00000498725 TCTE3Q8IZS6 198 aa5.06□□□□□ -1.6
CCDC171-209ENST00000498725 GNB1LQ9BYB4 327 aa5.06□□□□□ -1.6
CCDC171-209ENST00000498725 SND1-IT1Q9HBX3 110 aa5.06□□□□□ -1.6
CCDC171-209ENST00000498725 ATP5LO75964 103 aa5.05□□□□□ -1.6
CCDC171-209ENST00000498725 SPINK1P00995 79 aa5.05□□□□□ -1.6
CCDC171-209ENST00000498725 KRTAP19-2Q3LHN2 52 aa5.05□□□□□ -1.6
CCDC171-209ENST00000498725 Q8NDZ9 215 aa5.05□□□□□ -1.6
CCDC171-209ENST00000498725 ZNF625Q96I27 306 aaPredicted RBP5.05□□□□□ -1.6
CCDC171-209ENST00000498725 IGLV9-49A0A0B4J1Y8 123 aa5.04□□□□□ -1.6
CCDC171-209ENST00000498725 TINCRA0A1B0GVN0 87 aa5.04□□□□□ -1.6
CCDC171-209ENST00000498725 H3BS24 57 aa5.04□□□□□ -1.6
CCDC171-209ENST00000498725 M0R2T5 61 aa5.04□□□□□ -1.6
CCDC171-209ENST00000498725 NPSP0C0P6 89 aa5.04□□□□□ -1.6
CCDC171-209ENST00000498725 KRTAP10-6P60371 365 aaPredicted RBP5.04□□□□□ -1.6
CCDC171-209ENST00000498725 RPL24P83731 157 aaKnown RBP5.04□□□□□ -1.6
CCDC171-209ENST00000498725 SCGB3A1Q96QR1 104 aa5.04□□□□□ -1.6
CCDC171-209ENST00000498725 LAMTOR2Q9Y2Q5 125 aa5.04□□□□□ -1.6
CCDC171-209ENST00000498725 ZNF706Q9Y5V0 76 aaPredicted RBP5.04□□□□□ -1.6
CCDC171-209ENST00000498725 IGLV8-61A0A075B6I0 122 aa5.03□□□□□ -1.6
CCDC171-209ENST00000498725 ADCYAP1P18509 176 aa5.03□□□□□ -1.6
CCDC171-209ENST00000498725 MOBPQ13875 183 aa5.03□□□□□ -1.6
CCDC171-209ENST00000498725 PCOTHQ58A44 107 aa5.03□□□□□ -1.6
CCDC171-209ENST00000498725 ATP5L2Q7Z4Y8 100 aa5.03□□□□□ -1.6
CCDC171-209ENST00000498725 AKAP14Q86UN6 197 aa5.03□□□□□ -1.6
CCDC171-209ENST00000498725 Q8N377 158 aa5.03□□□□□ -1.6
CCDC171-209ENST00000498725 TOMM6Q96B49 74 aa5.03□□□□□ -1.6
CCDC171-209ENST00000498725 TIMM17AQ99595 171 aa5.03□□□□□ -1.6
CCDC171-209ENST00000498725 SMCR5Q8TEV8 140 aa5.02□□□□□ -1.61
CCDC171-209ENST00000498725 NXT2Q9NPJ8 142 aaKnown RBP5.02□□□□□ -1.61
CCDC171-209ENST00000498725 ERG28Q9UKR5 140 aa5.02□□□□□ -1.61
CCDC171-209ENST00000498725 IGLV5-45A0A087WSX0 123 aa5.01□□□□□ -1.61
CCDC171-209ENST00000498725 GAGE2AQ6NT46 116 aa5.01□□□□□ -1.61
CCDC171-209ENST00000498725 ERASQ7Z444 233 aa5.01□□□□□ -1.61
CCDC171-209ENST00000498725 FAM19A2Q8N3H0 131 aa5.01□□□□□ -1.61
CCDC171-209ENST00000498725 A0A0U1RRA0 63 aa5□□□□□ -1.61
CCDC171-209ENST00000498725 K7EMI3 77 aa5□□□□□ -1.61
CCDC171-209ENST00000498725 SLC25A20O43772 301 aa5□□□□□ -1.61
CCDC171-209ENST00000498725 G0S2P27469 103 aa5□□□□□ -1.61
CCDC171-209ENST00000498725 CST9LQ9H4G1 147 aa5□□□□□ -1.61
CCDC171-209ENST00000498725 C9orf92A6NGG3 77 aa4.99□□□□□ -1.61
CCDC171-209ENST00000498725 H3BRM9 83 aa4.99□□□□□ -1.61
CCDC171-209ENST00000498725 PEA15Q15121 130 aa4.99□□□□□ -1.61
CCDC171-209ENST00000498725 KIAA1644Q3SXP7 199 aa4.99□□□□□ -1.61
CCDC171-209ENST00000498725 ETDCA0A1B0GVM5 59 aa4.98□□□□□ -1.61
CCDC171-209ENST00000498725 NCR3O14931 201 aa4.98□□□□□ -1.61
CCDC171-209ENST00000498725 NDUFA6P56556 154 aa4.98□□□□□ -1.61
CCDC171-209ENST00000498725 LINC00158P58513 81 aa4.98□□□□□ -1.61
CCDC171-209ENST00000498725 hCG_2014768A0A024R1R8 64 aa4.97□□□□□ -1.61
CCDC171-209ENST00000498725 PMVKQ15126 192 aa4.97□□□□□ -1.61
CCDC171-209ENST00000498725 PRYO14603 147 aa4.96□□□□□ -1.62
CCDC171-209ENST00000498725 COX17Q14061 63 aa4.96□□□□□ -1.62
CCDC171-209ENST00000498725 C9orf153Q5TBE3 101 aa4.96□□□□□ -1.62
CCDC171-209ENST00000498725 COX6B2Q6YFQ2 88 aa4.96□□□□□ -1.62
CCDC171-209ENST00000498725 IGLV5-39A0A0G2JS06 123 aa4.95□□□□□ -1.62
CCDC171-209ENST00000498725 ERC2-IT1O76042 136 aa4.95□□□□□ -1.62
CCDC171-209ENST00000498725 RPS29P62273 56 aaKnown RBP4.95□□□□□ -1.62
CCDC171-209ENST00000498725 LINC00483Q53H64 154 aa4.95□□□□□ -1.62
CCDC171-209ENST00000498725 SSBP3-AS1Q7Z2R9 100 aa4.95□□□□□ -1.62
CCDC171-209ENST00000498725 ZNF22P17026 224 aaPredicted RBP4.94□□□□□ -1.62
CCDC171-209ENST00000498725 BOD1L2Q8IYS8 172 aa4.94□□□□□ -1.62
CCDC171-209ENST00000498725 ATP6V1G1O75348 118 aa4.93□□□□□ -1.62
CCDC171-209ENST00000498725 IGLC3P0DOY3 106 aa4.93□□□□□ -1.62
CCDC171-209ENST00000498725 HRCT1Q6UXD1 115 aa4.93□□□□□ -1.62
CCDC171-209ENST00000498725 TRBV10-3A0A0K0K1G6 114 aa4.92□□□□□ -1.62
CCDC171-209ENST00000498725 KRTAP4-16G5E9R7 235 aaPredicted RBP4.92□□□□□ -1.62
CCDC171-209ENST00000498725 MT-ND4LP03901 98 aa4.92□□□□□ -1.62
CCDC171-209ENST00000498725 SPRR1AP35321 89 aa4.92□□□□□ -1.62
CCDC171-209ENST00000498725 TMEM170BQ5T4T1 132 aa4.92□□□□□ -1.62
CCDC171-209ENST00000498725 KCNQ1DNQ9H478 68 aa4.92□□□□□ -1.62
CCDC171-209ENST00000498725 B5MCH6 92 aa4.91□□□□□ -1.62
CCDC171-209ENST00000498725 SMIM13P0DJ93 91 aa4.91□□□□□ -1.62
CCDC171-209ENST00000498725 FA2HQ7L5A8 372 aa4.91□□□□□ -1.62
CCDC171-209ENST00000498725 ANAPC16Q96DE5 110 aa4.91□□□□□ -1.62
CCDC171-209ENST00000498725 SMCO4Q9NRQ5 59 aa4.91□□□□□ -1.62
CCDC171-209ENST00000498725 LINC01549A6NIU2 74 aa4.9□□□□□ -1.63
CCDC171-209ENST00000498725 C11orf86A6NJI1 115 aa4.9□□□□□ -1.63
CCDC171-209ENST00000498725 Q9BRP9 147 aa4.9□□□□□ -1.63
CCDC171-209ENST00000498725 IGLV6-57P01721 117 aa4.89□□□□□ -1.63
CCDC171-209ENST00000498725 S100A12P80511 92 aa4.89□□□□□ -1.63
CCDC171-209ENST00000498725 MEIG1Q5JSS6 88 aa4.89□□□□□ -1.63
CCDC171-209ENST00000498725 MIR7-3HGQ8N6C7 128 aa4.89□□□□□ -1.63
CCDC171-209ENST00000498725 TRAV9-1A0A075B6T8 112 aa4.88□□□□□ -1.63
CCDC171-209ENST00000498725 LINC01546A6NGU7 62 aa4.87□□□□□ -1.63
CCDC171-209ENST00000498725 PMCHL1Q16048 86 aa4.87□□□□□ -1.63
CCDC171-209ENST00000498725 Q6Q795 121 aa4.87□□□□□ -1.63
CCDC171-209ENST00000498725 SFTA2Q6UW10 78 aa4.87□□□□□ -1.63
CCDC171-209ENST00000498725 BAGE3Q86Y29 109 aa4.87□□□□□ -1.63
CCDC171-209ENST00000498725 ST20-AS1Q8NBB2 130 aa4.87□□□□□ -1.63
CCDC171-209ENST00000498725 FLGP20930 4061 aaPredicted RBP4.87□□□□□ -1.63
CCDC171-209ENST00000498725 DDTP30046 118 aa4.86□□□□□ -1.63
CCDC171-209ENST00000498725 Q6ZRX8 168 aa4.86□□□□□ -1.63
CCDC171-209ENST00000498725 LIMD2Q9BT23 127 aa4.86□□□□□ -1.63
CCDC171-209ENST00000498725 KRTAP9-8Q9BYQ0 159 aa4.86□□□□□ -1.63
CCDC171-209ENST00000498725 A0A096LNJ9 63 aa4.85□□□□□ -1.63
CCDC171-209ENST00000498725 H7C2G1 150 aa4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms