RNA–Protein interactions for RNA: ENST00000498254.5

CALD1-224, Transcript of caldesmon 1, humanhuman

TSL 3

Gene CALD1, Length 443 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-224ENST00000498254 LMO7Q8WWI1 1683 aa1.61□□□□□ -2.15
CALD1-224ENST00000498254 RP1P56715 2156 aa1.61□□□□□ -2.15
CALD1-224ENST00000498254 COL4A2P08572 1712 aa1.61□□□□□ -2.15
CALD1-224ENST00000498254 FBN3Q75N90 2809 aa1.61□□□□□ -2.15
CALD1-224ENST00000498254 IGKV3OR2-268A0A0C4DH90 116 aa1.61□□□□□ -2.15
CALD1-224ENST00000498254 PIN1P1O15428 100 aa1.61□□□□□ -2.15
CALD1-224ENST00000498254 NDUFA3O95167 84 aa1.61□□□□□ -2.15
CALD1-224ENST00000498254 COX6B1P14854 86 aa1.61□□□□□ -2.15
CALD1-224ENST00000498254 CCL3L1P16619 93 aa1.61□□□□□ -2.15
CALD1-224ENST00000498254 CCL18P55774 89 aa1.61□□□□□ -2.15
CALD1-224ENST00000498254 OBSCN-AS1Q96MR7 158 aa1.61□□□□□ -2.15
CALD1-224ENST00000498254 UBL5Q9BZL1 73 aa1.61□□□□□ -2.15
CALD1-224ENST00000498254 R4GMQ9 66 aa1.61□□□□□ -2.15
CALD1-224ENST00000498254 UBR4Q5T4S7 5183 aa1.61□□□□□ -2.15
CALD1-224ENST00000498254 ANKRD17O75179 2603 aaKnown RBP1.61□□□□□ -2.15
CALD1-224ENST00000498254 FLNBO75369 2602 aaKnown RBP1.6□□□□□ -2.15
CALD1-224ENST00000498254 H0Y9P7 68 aa1.6□□□□□ -2.15
CALD1-224ENST00000498254 RNASE3P12724 160 aaKnown RBP1.6□□□□□ -2.15
CALD1-224ENST00000498254 ZNF137PP52743 207 aa1.6□□□□□ -2.15
CALD1-224ENST00000498254 KRTAP12-1P59990 96 aa1.6□□□□□ -2.15
CALD1-224ENST00000498254 CNBPP62633 177 aaKnown RBP1.6□□□□□ -2.15
CALD1-224ENST00000498254 C10orf113Q5VZT2 155 aa1.6□□□□□ -2.15
CALD1-224ENST00000498254 Q86TA4 180 aa1.6□□□□□ -2.15
CALD1-224ENST00000498254 AMELXQ99217 191 aa1.6□□□□□ -2.15
CALD1-224ENST00000498254 WFDC10AQ9H1F0 79 aa1.6□□□□□ -2.15
CALD1-224ENST00000498254 TMEM14CQ9P0S9 112 aa1.6□□□□□ -2.15
CALD1-224ENST00000498254 CR1P17927 2039 aa1.6□□□□□ -2.15
CALD1-224ENST00000498254 TNRC18O15417 2968 aaPredicted RBP1.6□□□□□ -2.15
CALD1-224ENST00000498254 A0A0G2JMZ2 1700 aa1.6□□□□□ -2.15
CALD1-224ENST00000498254 LRRC37A2A6NM11 1700 aa1.6□□□□□ -2.15
CALD1-224ENST00000498254 LRRC37AA6NMS7 1700 aa1.6□□□□□ -2.15
CALD1-224ENST00000498254 FREM3P0C091 2139 aa1.6□□□□□ -2.15
CALD1-224ENST00000498254 PIEZO1Q92508 2521 aa1.59□□□□□ -2.15
CALD1-224ENST00000498254 TRBV6-1A0A0K0K1D8 114 aa1.59□□□□□ -2.15
CALD1-224ENST00000498254 LCE6AA0A183 80 aa1.59□□□□□ -2.15
CALD1-224ENST00000498254 LINC01546A6NGU7 62 aa1.59□□□□□ -2.15
CALD1-224ENST00000498254 IGIPA6NJ69 53 aa1.59□□□□□ -2.15
CALD1-224ENST00000498254 NDUFB1O75438 58 aa1.59□□□□□ -2.15
CALD1-224ENST00000498254 IGLV3-1P01715 115 aa1.59□□□□□ -2.15
CALD1-224ENST00000498254 DEFB103AP81534 67 aa1.59□□□□□ -2.15
CALD1-224ENST00000498254 PDE6HQ13956 83 aa1.59□□□□□ -2.15
CALD1-224ENST00000498254 LAMA2P24043 3122 aaKnown RBP1.59□□□□□ -2.16
CALD1-224ENST00000498254 DNAJC13O75165 2243 aa1.58□□□□□ -2.16
CALD1-224ENST00000498254 UQCR11O14957 56 aa1.58□□□□□ -2.16
CALD1-224ENST00000498254 MGPP08493 103 aa1.58□□□□□ -2.16
CALD1-224ENST00000498254 KRTAP12-3P60328 96 aa1.58□□□□□ -2.16
CALD1-224ENST00000498254 DEFB112Q30KQ8 113 aa1.58□□□□□ -2.16
CALD1-224ENST00000498254 LINC00322Q6ZN03 302 aaPredicted RBP1.58□□□□□ -2.16
CALD1-224ENST00000498254 RPS27LQ71UM5 84 aaKnown RBP1.58□□□□□ -2.16
CALD1-224ENST00000498254 ZNF625Q96I27 306 aaPredicted RBP1.58□□□□□ -2.16
CALD1-224ENST00000498254 GAFA1Q96PS6 74 aa1.58□□□□□ -2.16
CALD1-224ENST00000498254 KLK9Q9UKQ9 250 aa1.58□□□□□ -2.16
CALD1-224ENST00000498254 BDP1A6H8Y1 2624 aa1.58□□□□□ -2.16
CALD1-224ENST00000498254 HECTD1Q9ULT8 2610 aa1.58□□□□□ -2.16
CALD1-224ENST00000498254 ITPR3Q14573 2671 aa1.57□□□□□ -2.16
CALD1-224ENST00000498254 VCANP13611 3396 aa1.57□□□□□ -2.16
CALD1-224ENST00000498254 MED12Q93074 2177 aa1.57□□□□□ -2.16
CALD1-224ENST00000498254 SDK1Q7Z5N4 2213 aa1.57□□□□□ -2.16
CALD1-224ENST00000498254 A0A087WTM6 91 aa1.57□□□□□ -2.16
CALD1-224ENST00000498254 PRB1P04280 392 aa1.57□□□□□ -2.16
CALD1-224ENST00000498254 PATE1Q8WXA2 126 aa1.57□□□□□ -2.16
CALD1-224ENST00000498254 SPRR4Q96PI1 79 aa1.57□□□□□ -2.16
CALD1-224ENST00000498254 FASNP49327 2511 aaKnown RBP1.57□□□□□ -2.16
CALD1-224ENST00000498254 ARFGEF3Q5TH69 2177 aa1.57□□□□□ -2.16
CALD1-224ENST00000498254 INTS1Q8N201 2190 aaKnown RBP1.57□□□□□ -2.16
CALD1-224ENST00000498254 HELZ2Q9BYK8 2649 aaKnown RBP1.56□□□□□ -2.16
CALD1-224ENST00000498254 COL4A5P29400 1685 aa1.56□□□□□ -2.16
CALD1-224ENST00000498254 LINC00959A0A1B0GUT2 108 aa1.56□□□□□ -2.16
CALD1-224ENST00000498254 NDUFA4O00483 81 aa1.56□□□□□ -2.16
CALD1-224ENST00000498254 PDE6GP18545 87 aa1.56□□□□□ -2.16
CALD1-224ENST00000498254 KRTAP13-4Q3LI77 160 aa1.56□□□□□ -2.16
CALD1-224ENST00000498254 SPATA8Q6RVD6 105 aa1.56□□□□□ -2.16
CALD1-224ENST00000498254 COA5Q86WW8 74 aa1.56□□□□□ -2.16
CALD1-224ENST00000498254 MYO18BQ8IUG5 2567 aa1.56□□□□□ -2.16
CALD1-224ENST00000498254 KIAA0100Q14667 2235 aaKnown RBP1.56□□□□□ -2.16
CALD1-224ENST00000498254 CEP192Q8TEP8 1941 aa1.56□□□□□ -2.16
CALD1-224ENST00000498254 ASH1LQ9NR48 2969 aaKnown RBP1.56□□□□□ -2.16
CALD1-224ENST00000498254 ZFHX4Q86UP3 3567 aa1.55□□□□□ -2.16
CALD1-224ENST00000498254 NBDYA0A0U1RRE5 68 aa1.55□□□□□ -2.16
CALD1-224ENST00000498254 JMJD7-PLA2G4BH0Y9G9 81 aa1.55□□□□□ -2.16
CALD1-224ENST00000498254 NCR3O14931 201 aa1.55□□□□□ -2.16
CALD1-224ENST00000498254 RPL37AP61513 92 aaKnown RBP1.55□□□□□ -2.16
CALD1-224ENST00000498254 HAMPP81172 84 aa1.55□□□□□ -2.16
CALD1-224ENST00000498254 TFF3Q07654 80 aa1.55□□□□□ -2.16
CALD1-224ENST00000498254 PCOTHQ58A44 107 aa1.55□□□□□ -2.16
CALD1-224ENST00000498254 Q6ZRN7 208 aaPredicted RBP1.55□□□□□ -2.16
CALD1-224ENST00000498254 TTTY10Q9BZA0 68 aa1.55□□□□□ -2.16
CALD1-224ENST00000498254 LINC00472Q9H8W2 130 aa1.55□□□□□ -2.16
CALD1-224ENST00000498254 TMEM167BQ9NRX6 74 aa1.55□□□□□ -2.16
CALD1-224ENST00000498254 SZT2Q5T011 3432 aa1.54□□□□□ -2.16
CALD1-224ENST00000498254 EYSQ5T1H1 3165 aa1.54□□□□□ -2.16
CALD1-224ENST00000498254 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.54□□□□□ -2.16
CALD1-224ENST00000498254 TRGV1A0A0A0MS02 117 aa1.54□□□□□ -2.16
CALD1-224ENST00000498254 TRBV6-4A0A1B0GX49 114 aa1.54□□□□□ -2.16
CALD1-224ENST00000498254 IGKV2-29A2NJV5 120 aaPredicted RBP1.54□□□□□ -2.16
CALD1-224ENST00000498254 IAPPP10997 89 aa1.54□□□□□ -2.16
CALD1-224ENST00000498254 RPL38P63173 70 aaKnown RBP1.54□□□□□ -2.16
CALD1-224ENST00000498254 Q96NJ1 140 aa1.54□□□□□ -2.16
CALD1-224ENST00000498254 KALRNO60229 2985 aa1.54□□□□□ -2.16
CALD1-224ENST00000498254 WDFY4Q6ZS81 3184 aa1.54□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms