RNA–Protein interactions for RNA: ENST00000498107.5

SSBP1-214, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP1, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-214ENST00000498107 UBE2BP63146 152 aa9.97□□□□□ -0.81
SSBP1-214ENST00000498107 ATOH7Q8N100 152 aa9.97□□□□□ -0.81
SSBP1-214ENST00000498107 NKAPP1Q8N9T2 125 aa9.97□□□□□ -0.81
SSBP1-214ENST00000498107 C22orf24Q9Y442 160 aa9.97□□□□□ -0.81
SSBP1-214ENST00000498107 IGLV5-37A0A075B6J1 123 aa9.96□□□□□ -0.82
SSBP1-214ENST00000498107 SCGB1D1O95968 90 aa9.96□□□□□ -0.82
SSBP1-214ENST00000498107 INAFM2P0DMQ5 153 aa9.96□□□□□ -0.82
SSBP1-214ENST00000498107 KRTAP7-1Q8IUC3 87 aa9.96□□□□□ -0.82
SSBP1-214ENST00000498107 MIR7-3HGQ8N6C7 128 aa9.96□□□□□ -0.82
SSBP1-214ENST00000498107 SRRM2Q9UQ35 2752 aaKnown RBP9.96□□□□□ -0.82
SSBP1-214ENST00000498107 ZNF815PA8K554 130 aa9.95□□□□□ -0.82
SSBP1-214ENST00000498107 PRR3P79522 188 aaKnown RBP9.95□□□□□ -0.82
SSBP1-214ENST00000498107 MRPL55Q7Z7F7 128 aaKnown RBP9.95□□□□□ -0.82
SSBP1-214ENST00000498107 IGKV2D-26A0A0A0MRZ7 120 aa9.94□□□□□ -0.82
SSBP1-214ENST00000498107 A0A0J9YXY3 114 aa9.94□□□□□ -0.82
SSBP1-214ENST00000498107 KRTAP10-4P60372 401 aaPredicted RBP9.94□□□□□ -0.82
SSBP1-214ENST00000498107 ANKRD39Q53RE8 183 aa9.93□□□□□ -0.82
SSBP1-214ENST00000498107 TIMM17BO60830 172 aa9.92□□□□□ -0.82
SSBP1-214ENST00000498107 MIEN1Q9BRT3 115 aa9.92□□□□□ -0.82
SSBP1-214ENST00000498107 PSORS1C2Q9UIG4 136 aa9.92□□□□□ -0.82
SSBP1-214ENST00000498107 TMA7Q9Y2S6 64 aaKnown RBP9.92□□□□□ -0.82
SSBP1-214ENST00000498107 VPREB1P12018 145 aa9.91□□□□□ -0.82
SSBP1-214ENST00000498107 BOD1L2Q8IYS8 172 aa9.91□□□□□ -0.82
SSBP1-214ENST00000498107 LOC107984156A0A0G2JMH3 177 aa9.9□□□□□ -0.82
SSBP1-214ENST00000498107 SCGB1D4Q6XE38 83 aa9.9□□□□□ -0.82
SSBP1-214ENST00000498107 ARL17AQ8IVW1 177 aa9.9□□□□□ -0.82
SSBP1-214ENST00000498107 LINC00167Q96N53 147 aa9.9□□□□□ -0.82
SSBP1-214ENST00000498107 C1orf137Q5JT78 98 aa9.89□□□□□ -0.83
SSBP1-214ENST00000498107 DAND5Q8N907 189 aa9.89□□□□□ -0.83
SSBP1-214ENST00000498107 TTTY13Q9BZ97 58 aa9.88□□□□□ -0.83
SSBP1-214ENST00000498107 GAGE10A6NGK3 116 aa9.87□□□□□ -0.83
SSBP1-214ENST00000498107 TMEM238C9JI98 176 aa9.87□□□□□ -0.83
SSBP1-214ENST00000498107 M0R378 163 aa9.87□□□□□ -0.83
SSBP1-214ENST00000498107 JOSD1Q15040 202 aaPredicted RBP9.86□□□□□ -0.83
SSBP1-214ENST00000498107 ADAMTSL4-AS1Q5T5F5 129 aa9.86□□□□□ -0.83
SSBP1-214ENST00000498107 COPS9Q8WXC6 57 aa9.86□□□□□ -0.83
SSBP1-214ENST00000498107 RPL37AP8A6NKH3 93 aa9.85□□□□□ -0.83
SSBP1-214ENST00000498107 SPINK6Q6UWN8 80 aa9.85□□□□□ -0.83
SSBP1-214ENST00000498107 KRTAP11-1Q8IUC1 163 aa9.85□□□□□ -0.83
SSBP1-214ENST00000498107 PCP2Q8IVA1 136 aa9.85□□□□□ -0.83
SSBP1-214ENST00000498107 LITAFQ99732 161 aa9.85□□□□□ -0.83
SSBP1-214ENST00000498107 NDUFC2O95298 119 aa9.84□□□□□ -0.83
SSBP1-214ENST00000498107 IGLV7-43P04211 117 aa9.84□□□□□ -0.83
SSBP1-214ENST00000498107 Q6ZVH6 145 aa9.84□□□□□ -0.83
SSBP1-214ENST00000498107 Q8NDZ9 215 aa9.84□□□□□ -0.83
SSBP1-214ENST00000498107 IGLV1-50A0A075B6I6 118 aa9.83□□□□□ -0.84
SSBP1-214ENST00000498107 HNRNPA3P51991 378 aaKnown RBP9.83□□□□□ -0.84
SSBP1-214ENST00000498107 LINC00308Q8TCZ7 52 aa9.83□□□□□ -0.84
SSBP1-214ENST00000498107 SPANXB1Q9NS25 103 aaPredicted RBP9.83□□□□□ -0.84
SSBP1-214ENST00000498107 FLG2Q5D862 2391 aaPredicted RBP9.83□□□□□ -0.84
SSBP1-214ENST00000498107 IGKV2-28A0A075B6P5 120 aa9.82□□□□□ -0.84
SSBP1-214ENST00000498107 TRBV10-2A0A0K0K1G8 114 aa9.82□□□□□ -0.84
SSBP1-214ENST00000498107 IGKV2D-28P01615 120 aa9.82□□□□□ -0.84
SSBP1-214ENST00000498107 NPC2P61916 151 aa9.82□□□□□ -0.84
SSBP1-214ENST00000498107 S100A12P80511 92 aa9.82□□□□□ -0.84
SSBP1-214ENST00000498107 SPANXDQ9BXN6 97 aa9.82□□□□□ -0.84
SSBP1-214ENST00000498107 SPANXCQ9NY87 97 aa9.82□□□□□ -0.84
SSBP1-214ENST00000498107 NCR3O14931 201 aa9.81□□□□□ -0.84
SSBP1-214ENST00000498107 IFITM1P13164 125 aa9.81□□□□□ -0.84
SSBP1-214ENST00000498107 SRSF9Q13242 221 aaKnown RBP eCLIP9.81□□□□□ -0.84
SSBP1-214ENST00000498107 VAMP8Q9BV40 100 aa9.81□□□□□ -0.84
SSBP1-214ENST00000498107 BCE1O60756 84 aa9.8□□□□□ -0.84
SSBP1-214ENST00000498107 SOSTDC1Q6X4U4 206 aa9.8□□□□□ -0.84
SSBP1-214ENST00000498107 REG3GQ6UW15 175 aa9.79□□□□□ -0.84
SSBP1-214ENST00000498107 DIRC1Q969H9 104 aa9.79□□□□□ -0.84
SSBP1-214ENST00000498107 PPDPFQ9H3Y8 114 aa9.79□□□□□ -0.84
SSBP1-214ENST00000498107 COX8AP10176 69 aa9.78□□□□□ -0.84
SSBP1-214ENST00000498107 RPL28P46779 137 aaKnown RBP9.78□□□□□ -0.84
SSBP1-214ENST00000498107 SPATA45Q537H7 98 aa9.78□□□□□ -0.84
SSBP1-214ENST00000498107 PAM16Q9Y3D7 125 aa9.78□□□□□ -0.84
SSBP1-214ENST00000498107 PRYO14603 147 aa9.77□□□□□ -0.85
SSBP1-214ENST00000498107 DLEU1O43261 78 aa9.77□□□□□ -0.85
SSBP1-214ENST00000498107 ZNF861PO60384 105 aa9.77□□□□□ -0.85
SSBP1-214ENST00000498107 OXTP01178 125 aa9.77□□□□□ -0.85
SSBP1-214ENST00000498107 S100A7L2Q5SY68 101 aa9.77□□□□□ -0.85
SSBP1-214ENST00000498107 LINC00518Q8N0U6 118 aa9.77□□□□□ -0.85
SSBP1-214ENST00000498107 TMEM126AQ9H061 195 aa9.77□□□□□ -0.85
SSBP1-214ENST00000498107 CBY1Q9Y3M2 126 aa9.77□□□□□ -0.85
SSBP1-214ENST00000498107 TRBV10-3A0A0K0K1G6 114 aa9.76□□□□□ -0.85
SSBP1-214ENST00000498107 DDTP30046 118 aa9.76□□□□□ -0.85
SSBP1-214ENST00000498107 UBE2AP49459 152 aa9.76□□□□□ -0.85
SSBP1-214ENST00000498107 PKHD1L1Q86WI1 4243 aa9.76□□□□□ -0.85
SSBP1-214ENST00000498107 EIF4EBP3O60516 100 aaPredicted RBP9.75□□□□□ -0.85
SSBP1-214ENST00000498107 PYY3Q5JQD4 70 aa9.75□□□□□ -0.85
SSBP1-214ENST00000498107 KCNQ1DNQ9H478 68 aa9.75□□□□□ -0.85
SSBP1-214ENST00000498107 KRTAP29-1A8MX34 341 aaPredicted RBP9.74□□□□□ -0.85
SSBP1-214ENST00000498107 H0Y9J4 135 aa9.73□□□□□ -0.85
SSBP1-214ENST00000498107 IGLV6-57P01721 117 aa9.73□□□□□ -0.85
SSBP1-214ENST00000498107 FAM19A1Q7Z5A9 133 aa9.73□□□□□ -0.85
SSBP1-214ENST00000498107 MUSTN1Q8IVN3 82 aa9.73□□□□□ -0.85
SSBP1-214ENST00000498107 HERC1Q15751 4861 aa9.73□□□□□ -0.85
SSBP1-214ENST00000498107 SLC25A34Q6PIV7 304 aa9.72□□□□□ -0.85
SSBP1-214ENST00000498107 C14orf144Q96I85 54 aa9.72□□□□□ -0.85
SSBP1-214ENST00000498107 J3QL48 77 aa9.71□□□□□ -0.86
SSBP1-214ENST00000498107 LINC00337Q8N6G1 96 aa9.71□□□□□ -0.86
SSBP1-214ENST00000498107 MYCBP2O75592 4640 aa9.71□□□□□ -0.86
SSBP1-214ENST00000498107 ETDCA0A1B0GVM5 59 aa9.7□□□□□ -0.86
SSBP1-214ENST00000498107 SPRR1AP35321 89 aa9.7□□□□□ -0.86
SSBP1-214ENST00000498107 OR13C6PQ8NH95 151 aa9.7□□□□□ -0.86
SSBP1-214ENST00000498107 TRAV23DV6A0A075B6W5 121 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms