RNA–Protein interactions for RNA: ENST00000498007.1

HLA-B-255, Transcript of major histocompatibility complex, class I, B, humanhuman

Gene HLA-B, Length 1,087 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-B-255ENST00000498007 E9PLD3 99 aa12.28□□□□□ -0.44
HLA-B-255ENST00000498007 SMIM13P0DJ93 91 aa12.28□□□□□ -0.44
HLA-B-255ENST00000498007 C22orf24Q9Y442 160 aa12.28□□□□□ -0.44
HLA-B-255ENST00000498007 SNRPEP62304 92 aaKnown RBP12.27□□□□□ -0.45
HLA-B-255ENST00000498007 PSORS1C2Q9UIG4 136 aa12.27□□□□□ -0.45
HLA-B-255ENST00000498007 KRTAP11-1Q8IUC1 163 aa12.26□□□□□ -0.45
HLA-B-255ENST00000498007 NMUP48645 174 aa12.25□□□□□ -0.45
HLA-B-255ENST00000498007 ATOH7Q8N100 152 aa12.25□□□□□ -0.45
HLA-B-255ENST00000498007 PLA2G2DQ9UNK4 145 aa12.25□□□□□ -0.45
HLA-B-255ENST00000498007 MRPL55Q7Z7F7 128 aaKnown RBP12.24□□□□□ -0.45
HLA-B-255ENST00000498007 NKAPP1Q8N9T2 125 aa12.24□□□□□ -0.45
HLA-B-255ENST00000498007 LBHQ53QV2 105 aaPredicted RBP12.23□□□□□ -0.45
HLA-B-255ENST00000498007 C1orf137Q5JT78 98 aa12.23□□□□□ -0.45
HLA-B-255ENST00000498007 MIR7-3HGQ8N6C7 128 aa12.23□□□□□ -0.45
HLA-B-255ENST00000498007 LINC00587B1AMM8 73 aa12.22□□□□□ -0.45
HLA-B-255ENST00000498007 TP73-AS1Q9UF72 201 aa12.22□□□□□ -0.45
HLA-B-255ENST00000498007 FLG2Q5D862 2391 aaPredicted RBP12.21□□□□□ -0.45
HLA-B-255ENST00000498007 GAGE10A6NGK3 116 aa12.21□□□□□ -0.45
HLA-B-255ENST00000498007 IGLV5-37A0A075B6J1 123 aa12.2□□□□□ -0.46
HLA-B-255ENST00000498007 IGKV2D-26A0A0A0MRZ7 120 aa12.2□□□□□ -0.46
HLA-B-255ENST00000498007 C5orf52A6NGY3 159 aa12.2□□□□□ -0.46
HLA-B-255ENST00000498007 DAND5Q8N907 189 aa12.2□□□□□ -0.46
HLA-B-255ENST00000498007 FAT3Q8TDW7 4589 aa12.19□□□□□ -0.46
HLA-B-255ENST00000498007 VPREB1P12018 145 aa12.19□□□□□ -0.46
HLA-B-255ENST00000498007 RPL24P83731 157 aaKnown RBP12.19□□□□□ -0.46
HLA-B-255ENST00000498007 Q8NDZ9 215 aa12.19□□□□□ -0.46
HLA-B-255ENST00000498007 LINC00167Q96N53 147 aa12.19□□□□□ -0.46
HLA-B-255ENST00000498007 RPL37AP8A6NKH3 93 aa12.18□□□□□ -0.46
HLA-B-255ENST00000498007 AKR1D1P51857 326 aa12.18□□□□□ -0.46
HLA-B-255ENST00000498007 A0A0J9YXY3 114 aa12.17□□□□□ -0.46
HLA-B-255ENST00000498007 ANKRD39Q53RE8 183 aa12.17□□□□□ -0.46
HLA-B-255ENST00000498007 TTTY13Q9BZ97 58 aa12.17□□□□□ -0.46
HLA-B-255ENST00000498007 LRP1Q07954 4544 aaKnown RBP12.17□□□□□ -0.46
HLA-B-255ENST00000498007 ZNF815PA8K554 130 aa12.16□□□□□ -0.46
HLA-B-255ENST00000498007 BOD1L2Q8IYS8 172 aa12.16□□□□□ -0.46
HLA-B-255ENST00000498007 IGKV2-28A0A075B6P5 120 aa12.14□□□□□ -0.47
HLA-B-255ENST00000498007 IGKV2D-28P01615 120 aa12.14□□□□□ -0.47
HLA-B-255ENST00000498007 IGLV7-43P04211 117 aa12.14□□□□□ -0.47
HLA-B-255ENST00000498007 SPINK6Q6UWN8 80 aa12.13□□□□□ -0.47
HLA-B-255ENST00000498007 NCR3O14931 201 aa12.12□□□□□ -0.47
HLA-B-255ENST00000498007 NPC2P61916 151 aa12.12□□□□□ -0.47
HLA-B-255ENST00000498007 MIEN1Q9BRT3 115 aa12.12□□□□□ -0.47
HLA-B-255ENST00000498007 SRSF9Q13242 221 aaKnown RBP eCLIP12.11□□□□□ -0.47
HLA-B-255ENST00000498007 SCGB1D1O95968 90 aa12.1□□□□□ -0.47
HLA-B-255ENST00000498007 ADAMTSL4-AS1Q5T5F5 129 aa12.1□□□□□ -0.47
HLA-B-255ENST00000498007 KRTAP29-1A8MX34 341 aaPredicted RBP12.09□□□□□ -0.47
HLA-B-255ENST00000498007 J3QL48 77 aa12.09□□□□□ -0.47
HLA-B-255ENST00000498007 IGLV1-50A0A075B6I6 118 aa12.08□□□□□ -0.48
HLA-B-255ENST00000498007 HSBP1L1C9JCN9 74 aa12.08□□□□□ -0.48
HLA-B-255ENST00000498007 M0R378 163 aa12.08□□□□□ -0.48
HLA-B-255ENST00000498007 SCGB1D4Q6XE38 83 aa12.08□□□□□ -0.48
HLA-B-255ENST00000498007 BCE1O60756 84 aa12.07□□□□□ -0.48
HLA-B-255ENST00000498007 OXTP01178 125 aa12.07□□□□□ -0.48
HLA-B-255ENST00000498007 PCP2Q8IVA1 136 aa12.07□□□□□ -0.48
HLA-B-255ENST00000498007 LITAFQ99732 161 aa12.07□□□□□ -0.48
HLA-B-255ENST00000498007 TIMM17BO60830 172 aa12.06□□□□□ -0.48
HLA-B-255ENST00000498007 LOC107984156A0A0G2JMH3 177 aa12.05□□□□□ -0.48
HLA-B-255ENST00000498007 TMEM238C9JI98 176 aa12.05□□□□□ -0.48
HLA-B-255ENST00000498007 REG3GQ6UW15 175 aa12.05□□□□□ -0.48
HLA-B-255ENST00000498007 SOSTDC1Q6X4U4 206 aa12.05□□□□□ -0.48
HLA-B-255ENST00000498007 ARL17AQ8IVW1 177 aa12.05□□□□□ -0.48
HLA-B-255ENST00000498007 DIRC1Q969H9 104 aa12.05□□□□□ -0.48
HLA-B-255ENST00000498007 EIF4EBP3O60516 100 aaPredicted RBP12.04□□□□□ -0.48
HLA-B-255ENST00000498007 H0Y9J4 135 aa12.03□□□□□ -0.48
HLA-B-255ENST00000498007 TMEM126AQ9H061 195 aa12.03□□□□□ -0.48
HLA-B-255ENST00000498007 ZNF861PO60384 105 aa12.02□□□□□ -0.49
HLA-B-255ENST00000498007 LINC00308Q8TCZ7 52 aa12.02□□□□□ -0.49
HLA-B-255ENST00000498007 SPANXB1Q9NS25 103 aaPredicted RBP12.02□□□□□ -0.49
HLA-B-255ENST00000498007 RPL28P46779 137 aaKnown RBP12.01□□□□□ -0.49
HLA-B-255ENST00000498007 UBE2AP49459 152 aa12.01□□□□□ -0.49
HLA-B-255ENST00000498007 NDUFC2O95298 119 aa12□□□□□ -0.49
HLA-B-255ENST00000498007 DMBT1Q9UGM3 2413 aaPredicted RBP12□□□□□ -0.49
HLA-B-255ENST00000498007 HERC1Q15751 4861 aa12□□□□□ -0.49
HLA-B-255ENST00000498007 TRBV10-3A0A0K0K1G6 114 aa11.99□□□□□ -0.49
HLA-B-255ENST00000498007 FAM19A1Q7Z5A9 133 aa11.99□□□□□ -0.49
HLA-B-255ENST00000498007 TRBV10-2A0A0K0K1G8 114 aa11.98□□□□□ -0.49
HLA-B-255ENST00000498007 PRLHP81277 87 aa11.98□□□□□ -0.49
HLA-B-255ENST00000498007 SPANXDQ9BXN6 97 aa11.98□□□□□ -0.49
HLA-B-255ENST00000498007 SPANXCQ9NY87 97 aa11.98□□□□□ -0.49
HLA-B-255ENST00000498007 PRYO14603 147 aa11.97□□□□□ -0.49
HLA-B-255ENST00000498007 DDTP30046 118 aa11.97□□□□□ -0.49
HLA-B-255ENST00000498007 S100A7L2Q5SY68 101 aa11.96□□□□□ -0.49
HLA-B-255ENST00000498007 LINC01600Q96MT4 127 aa11.96□□□□□ -0.49
HLA-B-255ENST00000498007 S100A12P80511 92 aa11.95□□□□□ -0.5
HLA-B-255ENST00000498007 KRTAP13-1Q8IUC0 172 aa11.95□□□□□ -0.5
HLA-B-255ENST00000498007 TNXBP22105 4242 aa11.94□□□□□ -0.5
HLA-B-255ENST00000498007 MT1HL1P0DM35 61 aa11.94□□□□□ -0.5
HLA-B-255ENST00000498007 JOSD1Q15040 202 aaPredicted RBP11.94□□□□□ -0.5
HLA-B-255ENST00000498007 LINC00518Q8N0U6 118 aa11.94□□□□□ -0.5
HLA-B-255ENST00000498007 KCNQ1DNQ9H478 68 aa11.94□□□□□ -0.5
HLA-B-255ENST00000498007 SMIM6P0DI80 62 aa11.93□□□□□ -0.5
HLA-B-255ENST00000498007 PAM16Q9Y3D7 125 aa11.93□□□□□ -0.5
HLA-B-255ENST00000498007 COPS9Q8WXC6 57 aa11.92□□□□□ -0.5
HLA-B-255ENST00000498007 IGLV6-57P01721 117 aa11.91□□□□□ -0.5
HLA-B-255ENST00000498007 Q6ZVH6 145 aa11.91□□□□□ -0.5
HLA-B-255ENST00000498007 VAMP8Q9BV40 100 aa11.91□□□□□ -0.5
HLA-B-255ENST00000498007 ETDCA0A1B0GVM5 59 aa11.9□□□□□ -0.5
HLA-B-255ENST00000498007 IFITM1P13164 125 aa11.9□□□□□ -0.5
HLA-B-255ENST00000498007 SPATA45Q537H7 98 aa11.9□□□□□ -0.5
HLA-B-255ENST00000498007 OR13C6PQ8NH95 151 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 983 ms