RNA–Protein interactions for RNA: ENST00000497703.1

GARNL3-221, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 3

Gene GARNL3, Length 304 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-221ENST00000497703 CKS2P33552 79 aa3.28□□□□□ -1.88
GARNL3-221ENST00000497703 FXYD7P58549 80 aa3.28□□□□□ -1.88
GARNL3-221ENST00000497703 KRTDAPP60985 99 aa3.28□□□□□ -1.88
GARNL3-221ENST00000497703 PKIAP61925 76 aa3.28□□□□□ -1.88
GARNL3-221ENST00000497703 SPINK13Q1W4C9 94 aa3.28□□□□□ -1.88
GARNL3-221ENST00000497703 SPANXN1Q5VSR9 72 aa3.28□□□□□ -1.88
GARNL3-221ENST00000497703 PRO1933Q9H354 126 aa3.28□□□□□ -1.88
GARNL3-221ENST00000497703 LAMTOR2Q9Y2Q5 125 aa3.28□□□□□ -1.88
GARNL3-221ENST00000497703 TIMM8BQ9Y5J9 83 aaPredicted RBP3.28□□□□□ -1.88
GARNL3-221ENST00000497703 IGLV10-54A0A075B6I4 117 aa3.27□□□□□ -1.89
GARNL3-221ENST00000497703 TRAV26-2A0A0B4J265 109 aa3.27□□□□□ -1.89
GARNL3-221ENST00000497703 OR4C46A6NHA9 309 aa3.27□□□□□ -1.89
GARNL3-221ENST00000497703 M0R381 172 aa3.27□□□□□ -1.89
GARNL3-221ENST00000497703 LEPROTL1O95214 131 aa3.27□□□□□ -1.89
GARNL3-221ENST00000497703 MIFP14174 115 aa3.27□□□□□ -1.89
GARNL3-221ENST00000497703 C12orf74Q32Q52 190 aa3.27□□□□□ -1.89
GARNL3-221ENST00000497703 LELP1Q5T871 98 aa3.27□□□□□ -1.89
GARNL3-221ENST00000497703 SMIM15Q7Z3B0 74 aa3.27□□□□□ -1.89
GARNL3-221ENST00000497703 Q8N8P6 123 aa3.27□□□□□ -1.89
GARNL3-221ENST00000497703 Q8NAQ8 132 aa3.27□□□□□ -1.89
GARNL3-221ENST00000497703 MRAP2Q96G30 205 aa3.27□□□□□ -1.89
GARNL3-221ENST00000497703 LINC00467Q9BRT7 94 aa3.27□□□□□ -1.89
GARNL3-221ENST00000497703 DPH3P1Q9H4G8 78 aa3.27□□□□□ -1.89
GARNL3-221ENST00000497703 PHLDA3Q9Y5J5 127 aa3.27□□□□□ -1.89
GARNL3-221ENST00000497703 MUC2Q02817 5179 aa3.26□□□□□ -1.89
GARNL3-221ENST00000497703 SYS1-DBNDD2H3BUS1 97 aa3.26□□□□□ -1.89
GARNL3-221ENST00000497703 PRM2P04554 102 aa3.26□□□□□ -1.89
GARNL3-221ENST00000497703 CRYGDP07320 174 aa3.26□□□□□ -1.89
GARNL3-221ENST00000497703 DDTP30046 118 aa3.26□□□□□ -1.89
GARNL3-221ENST00000497703 FCER1GP30273 86 aa3.26□□□□□ -1.89
GARNL3-221ENST00000497703 TMEM70Q9BUB7 260 aa3.26□□□□□ -1.89
GARNL3-221ENST00000497703 MAP1LC3AQ9H492 121 aa3.26□□□□□ -1.89
GARNL3-221ENST00000497703 LRP1BQ9NZR2 4599 aa3.26□□□□□ -1.89
GARNL3-221ENST00000497703 DNAH5Q8TE73 4624 aa3.25□□□□□ -1.89
GARNL3-221ENST00000497703 TSTD3H0UI37 97 aa3.25□□□□□ -1.89
GARNL3-221ENST00000497703 HBDP02042 147 aa3.25□□□□□ -1.89
GARNL3-221ENST00000497703 POLR2KP53803 58 aaKnown RBP3.25□□□□□ -1.89
GARNL3-221ENST00000497703 LINC01545Q5VT33 79 aa3.25□□□□□ -1.89
GARNL3-221ENST00000497703 C1orf158Q8N1D5 194 aa3.25□□□□□ -1.89
GARNL3-221ENST00000497703 PTH2Q96A98 100 aa3.25□□□□□ -1.89
GARNL3-221ENST00000497703 RPL39LQ96EH5 51 aaKnown RBP3.25□□□□□ -1.89
GARNL3-221ENST00000497703 AP1S3Q96PC3 154 aa3.25□□□□□ -1.89
GARNL3-221ENST00000497703 C20orf78Q9BR46 151 aa3.25□□□□□ -1.89
GARNL3-221ENST00000497703 NXT2Q9NPJ8 142 aaKnown RBP3.25□□□□□ -1.89
GARNL3-221ENST00000497703 HSPB8Q9UJY1 196 aa3.25□□□□□ -1.89
GARNL3-221ENST00000497703 TRBV6-5A0A0K0K1A5 114 aa3.24□□□□□ -1.89
GARNL3-221ENST00000497703 A0A1B0GU33 70 aa3.24□□□□□ -1.89
GARNL3-221ENST00000497703 MGPP08493 103 aa3.24□□□□□ -1.89
GARNL3-221ENST00000497703 IGLC3P0DOY3 106 aa3.24□□□□□ -1.89
GARNL3-221ENST00000497703 CCL18P55774 89 aa3.24□□□□□ -1.89
GARNL3-221ENST00000497703 SPATA45Q537H7 98 aa3.24□□□□□ -1.89
GARNL3-221ENST00000497703 ATOH7Q8N100 152 aa3.24□□□□□ -1.89
GARNL3-221ENST00000497703 ZNRF2Q8NHG8 242 aa3.24□□□□□ -1.89
GARNL3-221ENST00000497703 IFI27L1Q96BM0 104 aa3.24□□□□□ -1.89
GARNL3-221ENST00000497703 C14orf144Q96I85 54 aa3.24□□□□□ -1.89
GARNL3-221ENST00000497703 VAMP8Q9BV40 100 aa3.24□□□□□ -1.89
GARNL3-221ENST00000497703 SMIM2Q9BVW6 85 aa3.24□□□□□ -1.89
GARNL3-221ENST00000497703 M0QY20 66 aa3.23□□□□□ -1.89
GARNL3-221ENST00000497703 M0R2P5 195 aa3.23□□□□□ -1.89
GARNL3-221ENST00000497703 PPP1R17O96001 155 aa3.23□□□□□ -1.89
GARNL3-221ENST00000497703 SPART-AS1P0CW21 52 aa3.23□□□□□ -1.89
GARNL3-221ENST00000497703 SMIM17P0DL12 118 aa3.23□□□□□ -1.89
GARNL3-221ENST00000497703 EMP1P54849 157 aa3.23□□□□□ -1.89
GARNL3-221ENST00000497703 CTAG1AP78358 180 aa3.23□□□□□ -1.89
GARNL3-221ENST00000497703 PMCHL2Q9BQD1 86 aa3.23□□□□□ -1.89
GARNL3-221ENST00000497703 MIEN1Q9BRT3 115 aa3.23□□□□□ -1.89
GARNL3-221ENST00000497703 C20orf202A1L168 122 aa3.22□□□□□ -1.89
GARNL3-221ENST00000497703 K7EMI3 77 aa3.22□□□□□ -1.89
GARNL3-221ENST00000497703 HTN1P15515 57 aa3.22□□□□□ -1.89
GARNL3-221ENST00000497703 FAM74A4Q5TZK3 123 aa3.22□□□□□ -1.89
GARNL3-221ENST00000497703 CFAP126Q5VTH2 177 aa3.22□□□□□ -1.89
GARNL3-221ENST00000497703 ZNF705AQ6ZN79 300 aaPredicted RBP3.22□□□□□ -1.89
GARNL3-221ENST00000497703 TOMM6Q96B49 74 aa3.22□□□□□ -1.89
GARNL3-221ENST00000497703 ST20Q9HBF5 79 aa3.22□□□□□ -1.89
GARNL3-221ENST00000497703 MRPL16Q9NX20 251 aaKnown RBP3.22□□□□□ -1.89
GARNL3-221ENST00000497703 TRBV27A0A0K0K1C4 114 aa3.21□□□□□ -1.9
GARNL3-221ENST00000497703 SDHAF1A6NFY7 115 aa3.21□□□□□ -1.9
GARNL3-221ENST00000497703 A8MWV9 139 aa3.21□□□□□ -1.9
GARNL3-221ENST00000497703 MP68P56378 58 aa3.21□□□□□ -1.9
GARNL3-221ENST00000497703 ZNF56Q15929 161 aa3.21□□□□□ -1.9
GARNL3-221ENST00000497703 KRTAP13-1Q8IUC0 172 aa3.21□□□□□ -1.9
GARNL3-221ENST00000497703 SNHG12Q9BXW3 62 aa3.21□□□□□ -1.9
GARNL3-221ENST00000497703 UQCR10Q9UDW1 63 aa3.21□□□□□ -1.9
GARNL3-221ENST00000497703 A0A087WX48 190 aa3.2□□□□□ -1.9
GARNL3-221ENST00000497703 IGHV3-73A0A0B4J1V6 119 aa3.2□□□□□ -1.9
GARNL3-221ENST00000497703 TRAV12-1A0A0B4J245 112 aa3.2□□□□□ -1.9
GARNL3-221ENST00000497703 IGIPA6NJ69 53 aa3.2□□□□□ -1.9
GARNL3-221ENST00000497703 TMEM263Q8WUH6 116 aaKnown RBP3.2□□□□□ -1.9
GARNL3-221ENST00000497703 ZCCHC13Q8WW36 166 aaKnown RBP3.2□□□□□ -1.9
GARNL3-221ENST00000497703 SCGB3A1Q96QR1 104 aa3.2□□□□□ -1.9
GARNL3-221ENST00000497703 C2orf88Q9BSF0 95 aa3.2□□□□□ -1.9
GARNL3-221ENST00000497703 TMEM208Q9BTX3 173 aa3.2□□□□□ -1.9
GARNL3-221ENST00000497703 TP73-AS1Q9UF72 201 aa3.2□□□□□ -1.9
GARNL3-221ENST00000497703 HHLA3Q9XRX5 114 aa3.2□□□□□ -1.9
GARNL3-221ENST00000497703 LRP2P98164 4655 aa3.19□□□□□ -1.9
GARNL3-221ENST00000497703 A0A1W2PNM2 257 aa3.19□□□□□ -1.9
GARNL3-221ENST00000497703 HSBP1L1C9JCN9 74 aa3.19□□□□□ -1.9
GARNL3-221ENST00000497703 I3L3M4 83 aa3.19□□□□□ -1.9
GARNL3-221ENST00000497703 M0R143 59 aa3.19□□□□□ -1.9
GARNL3-221ENST00000497703 IGKCP01834 107 aa3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms