RNA–Protein interactions for RNA: ENST00000496202.5

PRPF3-207, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 1 (best)

Gene PRPF3, Length 1,082 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-207ENST00000496202 EPM2AB3EWF7 344 aa6.11□□□□□ -1.43
PRPF3-207ENST00000496202 LINC00158P58513 81 aa6.11□□□□□ -1.43
PRPF3-207ENST00000496202 HSPG2P98160 4391 aa6.1□□□□□ -1.43
PRPF3-207ENST00000496202 A0A0U1RRA0 63 aa6.1□□□□□ -1.43
PRPF3-207ENST00000496202 HSBP1L1C9JCN9 74 aa6.1□□□□□ -1.43
PRPF3-207ENST00000496202 Q5VSD8 79 aa6.1□□□□□ -1.43
PRPF3-207ENST00000496202 RYR1P21817 5038 aa6.09□□□□□ -1.43
PRPF3-207ENST00000496202 DNAH8Q96JB1 4490 aa6.09□□□□□ -1.43
PRPF3-207ENST00000496202 A0A1W2PNN7 141 aa6.09□□□□□ -1.43
PRPF3-207ENST00000496202 FAM168BA1KXE4 195 aa6.09□□□□□ -1.43
PRPF3-207ENST00000496202 M0QXV9 152 aa6.09□□□□□ -1.43
PRPF3-207ENST00000496202 SMIM13P0DJ93 91 aa6.09□□□□□ -1.43
PRPF3-207ENST00000496202 RPL37AP61513 92 aaKnown RBP6.09□□□□□ -1.43
PRPF3-207ENST00000496202 C9orf129Q5T035 196 aaKnown RBP6.09□□□□□ -1.43
PRPF3-207ENST00000496202 ZNF815PA8K554 130 aa6.08□□□□□ -1.44
PRPF3-207ENST00000496202 SND1-IT1Q9HBX3 110 aa6.08□□□□□ -1.44
PRPF3-207ENST00000496202 IGKV2D-26A0A0A0MRZ7 120 aa6.07□□□□□ -1.44
PRPF3-207ENST00000496202 NKAPP1Q8N9T2 125 aa6.07□□□□□ -1.44
PRPF3-207ENST00000496202 TRIAP1O43715 76 aa6.06□□□□□ -1.44
PRPF3-207ENST00000496202 UBE2BP63146 152 aa6.06□□□□□ -1.44
PRPF3-207ENST00000496202 RPL24P83731 157 aaKnown RBP6.06□□□□□ -1.44
PRPF3-207ENST00000496202 LBHQ53QV2 105 aaPredicted RBP6.06□□□□□ -1.44
PRPF3-207ENST00000496202 SERTAD4-AS1Q5TG53 156 aa6.06□□□□□ -1.44
PRPF3-207ENST00000496202 PHF5AQ7RTV0 110 aaKnown RBP6.06□□□□□ -1.44
PRPF3-207ENST00000496202 MIR7-3HGQ8N6C7 128 aa6.06□□□□□ -1.44
PRPF3-207ENST00000496202 A0A0J9YXY3 114 aa6.05□□□□□ -1.44
PRPF3-207ENST00000496202 MIEN1Q9BRT3 115 aa6.05□□□□□ -1.44
PRPF3-207ENST00000496202 HERC2O95714 4834 aa6.04□□□□□ -1.44
PRPF3-207ENST00000496202 SCGB1D4Q6XE38 83 aa6.04□□□□□ -1.44
PRPF3-207ENST00000496202 DAND5Q8N907 189 aa6.04□□□□□ -1.44
PRPF3-207ENST00000496202 KRTAP17-1Q9BYP8 105 aa6.04□□□□□ -1.44
PRPF3-207ENST00000496202 TTTY13Q9BZ97 58 aa6.04□□□□□ -1.44
PRPF3-207ENST00000496202 TP73-AS1Q9UF72 201 aa6.04□□□□□ -1.44
PRPF3-207ENST00000496202 C22orf24Q9Y442 160 aa6.04□□□□□ -1.44
PRPF3-207ENST00000496202 FLG2Q5D862 2391 aaPredicted RBP6.04□□□□□ -1.44
PRPF3-207ENST00000496202 SRRM2Q9UQ35 2752 aaKnown RBP6.04□□□□□ -1.44
PRPF3-207ENST00000496202 IGLV5-37A0A075B6J1 123 aa6.03□□□□□ -1.44
PRPF3-207ENST00000496202 TIMM17BO60830 172 aa6.03□□□□□ -1.44
PRPF3-207ENST00000496202 PRR3P79522 188 aaKnown RBP6.03□□□□□ -1.44
PRPF3-207ENST00000496202 MRPL55Q7Z7F7 128 aaKnown RBP6.03□□□□□ -1.44
PRPF3-207ENST00000496202 KRTAP7-1Q8IUC3 87 aa6.03□□□□□ -1.44
PRPF3-207ENST00000496202 BOD1L2Q8IYS8 172 aa6.03□□□□□ -1.44
PRPF3-207ENST00000496202 C9orf118A6NHY6 69 aa6.02□□□□□ -1.45
PRPF3-207ENST00000496202 VPREB1P12018 145 aa6.02□□□□□ -1.45
PRPF3-207ENST00000496202 PCP2Q8IVA1 136 aa6.02□□□□□ -1.45
PRPF3-207ENST00000496202 VAMP8Q9BV40 100 aa6.02□□□□□ -1.45
PRPF3-207ENST00000496202 KRTAP4-5Q9BYR2 181 aa6.02□□□□□ -1.45
PRPF3-207ENST00000496202 TMEM238C9JI98 176 aa6.01□□□□□ -1.45
PRPF3-207ENST00000496202 INAFM2P0DMQ5 153 aa6.01□□□□□ -1.45
PRPF3-207ENST00000496202 NPC2P61916 151 aa6.01□□□□□ -1.45
PRPF3-207ENST00000496202 JOSD1Q15040 202 aaPredicted RBP6.01□□□□□ -1.45
PRPF3-207ENST00000496202 PSORS1C2Q9UIG4 136 aa6.01□□□□□ -1.45
PRPF3-207ENST00000496202 VPS13BQ7Z7G8 4022 aa6.01□□□□□ -1.45
PRPF3-207ENST00000496202 NCR3O14931 201 aa6□□□□□ -1.45
PRPF3-207ENST00000496202 C1orf137Q5JT78 98 aa6□□□□□ -1.45
PRPF3-207ENST00000496202 ADAMTSL4-AS1Q5T5F5 129 aa6□□□□□ -1.45
PRPF3-207ENST00000496202 COPS9Q8WXC6 57 aa6□□□□□ -1.45
PRPF3-207ENST00000496202 LINC00167Q96N53 147 aa6□□□□□ -1.45
PRPF3-207ENST00000496202 RPL37AP8A6NKH3 93 aa5.99□□□□□ -1.45
PRPF3-207ENST00000496202 M0R378 163 aa5.99□□□□□ -1.45
PRPF3-207ENST00000496202 SPATA45Q537H7 98 aa5.99□□□□□ -1.45
PRPF3-207ENST00000496202 PAM16Q9Y3D7 125 aa5.99□□□□□ -1.45
PRPF3-207ENST00000496202 IGKV2-28A0A075B6P5 120 aa5.98□□□□□ -1.45
PRPF3-207ENST00000496202 LOC107984156A0A0G2JMH3 177 aa5.98□□□□□ -1.45
PRPF3-207ENST00000496202 IGKV2D-28P01615 120 aa5.98□□□□□ -1.45
PRPF3-207ENST00000496202 KRTAP10-4P60372 401 aaPredicted RBP5.98□□□□□ -1.45
PRPF3-207ENST00000496202 ARL17AQ8IVW1 177 aa5.98□□□□□ -1.45
PRPF3-207ENST00000496202 Q8NDZ9 215 aa5.98□□□□□ -1.45
PRPF3-207ENST00000496202 LINC00308Q8TCZ7 52 aa5.98□□□□□ -1.45
PRPF3-207ENST00000496202 LITAFQ99732 161 aa5.98□□□□□ -1.45
PRPF3-207ENST00000496202 SPANXB1Q9NS25 103 aaPredicted RBP5.98□□□□□ -1.45
PRPF3-207ENST00000496202 FAT1Q14517 4588 aa5.98□□□□□ -1.45
PRPF3-207ENST00000496202 PRYO14603 147 aa5.97□□□□□ -1.45
PRPF3-207ENST00000496202 COX8AP10176 69 aa5.97□□□□□ -1.45
PRPF3-207ENST00000496202 S100A12P80511 92 aa5.97□□□□□ -1.45
PRPF3-207ENST00000496202 PYY3Q5JQD4 70 aa5.97□□□□□ -1.45
PRPF3-207ENST00000496202 Q6ZVH6 145 aa5.97□□□□□ -1.45
PRPF3-207ENST00000496202 KRTAP11-1Q8IUC1 163 aa5.97□□□□□ -1.45
PRPF3-207ENST00000496202 SPANXDQ9BXN6 97 aa5.97□□□□□ -1.45
PRPF3-207ENST00000496202 SPANXCQ9NY87 97 aa5.97□□□□□ -1.45
PRPF3-207ENST00000496202 TRBV10-2A0A0K0K1G8 114 aa5.96□□□□□ -1.46
PRPF3-207ENST00000496202 NDUFC2O95298 119 aa5.96□□□□□ -1.46
PRPF3-207ENST00000496202 IFITM1P13164 125 aa5.96□□□□□ -1.46
PRPF3-207ENST00000496202 SRSF9Q13242 221 aaKnown RBP eCLIP5.96□□□□□ -1.46
PRPF3-207ENST00000496202 SOSTDC1Q6X4U4 206 aa5.96□□□□□ -1.46
PRPF3-207ENST00000496202 IGLV1-50A0A075B6I6 118 aa5.95□□□□□ -1.46
PRPF3-207ENST00000496202 BCE1O60756 84 aa5.95□□□□□ -1.46
PRPF3-207ENST00000496202 IGLV7-43P04211 117 aa5.95□□□□□ -1.46
PRPF3-207ENST00000496202 S100A7L2Q5SY68 101 aa5.95□□□□□ -1.46
PRPF3-207ENST00000496202 SLC25A34Q6PIV7 304 aa5.95□□□□□ -1.46
PRPF3-207ENST00000496202 C14orf144Q96I85 54 aa5.95□□□□□ -1.46
PRPF3-207ENST00000496202 DDTP30046 118 aa5.94□□□□□ -1.46
PRPF3-207ENST00000496202 UBE2AP49459 152 aa5.94□□□□□ -1.46
PRPF3-207ENST00000496202 HNRNPA3P51991 378 aaKnown RBP5.94□□□□□ -1.46
PRPF3-207ENST00000496202 REG3GQ6UW15 175 aa5.94□□□□□ -1.46
PRPF3-207ENST00000496202 DMBT1Q9UGM3 2413 aaPredicted RBP5.94□□□□□ -1.46
PRPF3-207ENST00000496202 TRBV10-3A0A0K0K1G6 114 aa5.93□□□□□ -1.46
PRPF3-207ENST00000496202 DLEU1O43261 78 aa5.93□□□□□ -1.46
PRPF3-207ENST00000496202 RPL28P46779 137 aaKnown RBP5.93□□□□□ -1.46
PRPF3-207ENST00000496202 SPINK6Q6UWN8 80 aa5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms