RNA–Protein interactions for RNA: ENST00000495666.5

RFTN1-211, Transcript of raftlin, lipid raft linker 1, humanhuman

TSL 4

Gene RFTN1, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-211ENST00000495666 CARHSP1Q9Y2V2 147 aaKnown RBP6.31□□□□□ -1.4
RFTN1-211ENST00000495666 VPREB1P12018 145 aa6.3□□□□□ -1.4
RFTN1-211ENST00000495666 KRTAP13-2Q52LG2 175 aa6.3□□□□□ -1.4
RFTN1-211ENST00000495666 Q8NDZ9 215 aa6.3□□□□□ -1.4
RFTN1-211ENST00000495666 HIGD2AQ9BW72 106 aa6.3□□□□□ -1.4
RFTN1-211ENST00000495666 CHTOPQ9Y3Y2 248 aaKnown RBP6.3□□□□□ -1.4
RFTN1-211ENST00000495666 IGLV5-37A0A075B6J1 123 aa6.29□□□□□ -1.4
RFTN1-211ENST00000495666 IGKV2D-26A0A0A0MRZ7 120 aa6.29□□□□□ -1.4
RFTN1-211ENST00000495666 IGLV5-39A0A0G2JS06 123 aa6.29□□□□□ -1.4
RFTN1-211ENST00000495666 TMEM126AQ9H061 195 aa6.29□□□□□ -1.4
RFTN1-211ENST00000495666 NCR3O14931 201 aa6.28□□□□□ -1.4
RFTN1-211ENST00000495666 ATP6V1G1O75348 118 aa6.28□□□□□ -1.4
RFTN1-211ENST00000495666 RPL24P83731 157 aaKnown RBP6.28□□□□□ -1.4
RFTN1-211ENST00000495666 MEIG1Q5JSS6 88 aa6.28□□□□□ -1.4
RFTN1-211ENST00000495666 C10orf91Q5T1B1 145 aa6.28□□□□□ -1.4
RFTN1-211ENST00000495666 NDUFA5Q16718 116 aa6.27□□□□□ -1.41
RFTN1-211ENST00000495666 CBLN2Q8IUK8 224 aa6.27□□□□□ -1.41
RFTN1-211ENST00000495666 LINC00304Q8N9R0 145 aa6.27□□□□□ -1.41
RFTN1-211ENST00000495666 M0R378 163 aa6.26□□□□□ -1.41
RFTN1-211ENST00000495666 SMIM13P0DJ93 91 aa6.26□□□□□ -1.41
RFTN1-211ENST00000495666 KRTAP13-1Q8IUC0 172 aa6.26□□□□□ -1.41
RFTN1-211ENST00000495666 FAM19A2Q8N3H0 131 aa6.26□□□□□ -1.41
RFTN1-211ENST00000495666 C3orf22Q8N5N4 141 aa6.26□□□□□ -1.41
RFTN1-211ENST00000495666 SNAPINO95295 136 aa6.25□□□□□ -1.41
RFTN1-211ENST00000495666 IFI27L1Q96BM0 104 aa6.25□□□□□ -1.41
RFTN1-211ENST00000495666 COX17Q14061 63 aa6.24□□□□□ -1.41
RFTN1-211ENST00000495666 BOD1L2Q8IYS8 172 aa6.24□□□□□ -1.41
RFTN1-211ENST00000495666 SVBPQ8N300 66 aa6.24□□□□□ -1.41
RFTN1-211ENST00000495666 PPDPFQ9H3Y8 114 aa6.24□□□□□ -1.41
RFTN1-211ENST00000495666 TMEM223A0PJW6 202 aa6.23□□□□□ -1.41
RFTN1-211ENST00000495666 MIR7-3HGQ8N6C7 128 aa6.23□□□□□ -1.41
RFTN1-211ENST00000495666 MUC2Q02817 5179 aa6.23□□□□□ -1.41
RFTN1-211ENST00000495666 HSBP1O75506 76 aa6.22□□□□□ -1.41
RFTN1-211ENST00000495666 DAND5Q8N907 189 aa6.22□□□□□ -1.41
RFTN1-211ENST00000495666 CDIP1Q9H305 208 aa6.22□□□□□ -1.41
RFTN1-211ENST00000495666 FAM229BQ4G0N7 80 aa6.21□□□□□ -1.42
RFTN1-211ENST00000495666 PLEKHB2Q96CS7 222 aa6.21□□□□□ -1.42
RFTN1-211ENST00000495666 PMCHL2Q9BQD1 86 aa6.21□□□□□ -1.42
RFTN1-211ENST00000495666 ETDCA0A1B0GVM5 59 aa6.2□□□□□ -1.42
RFTN1-211ENST00000495666 FABP4P15090 132 aa6.2□□□□□ -1.42
RFTN1-211ENST00000495666 CHCHD1Q96BP2 118 aaKnown RBP6.2□□□□□ -1.42
RFTN1-211ENST00000495666 NDUFA12Q9UI09 145 aa6.2□□□□□ -1.42
RFTN1-211ENST00000495666 IGLV7-46A0A075B6I9 117 aa6.19□□□□□ -1.42
RFTN1-211ENST00000495666 NPC2P61916 151 aa6.19□□□□□ -1.42
RFTN1-211ENST00000495666 SFTA2Q6UW10 78 aa6.19□□□□□ -1.42
RFTN1-211ENST00000495666 TRAV12-1A0A0B4J245 112 aa6.18□□□□□ -1.42
RFTN1-211ENST00000495666 TRBV10-3A0A0K0K1G6 114 aa6.18□□□□□ -1.42
RFTN1-211ENST00000495666 TRGC2P03986 189 aa6.18□□□□□ -1.42
RFTN1-211ENST00000495666 TSPEAR-AS2P59090 65 aa6.18□□□□□ -1.42
RFTN1-211ENST00000495666 SPRR4Q96PI1 79 aa6.18□□□□□ -1.42
RFTN1-211ENST00000495666 IGLV9-49A0A0B4J1Y8 123 aa6.17□□□□□ -1.42
RFTN1-211ENST00000495666 PRYO14603 147 aa6.17□□□□□ -1.42
RFTN1-211ENST00000495666 SERF1AO75920 110 aa6.17□□□□□ -1.42
RFTN1-211ENST00000495666 XP32Q5T750 250 aa6.17□□□□□ -1.42
RFTN1-211ENST00000495666 GAGE2AQ6NT46 116 aa6.17□□□□□ -1.42
RFTN1-211ENST00000495666 SMCR5Q8TEV8 140 aa6.17□□□□□ -1.42
RFTN1-211ENST00000495666 YPEL4Q96NS1 127 aa6.17□□□□□ -1.42
RFTN1-211ENST00000495666 A0A0U1RQV1 116 aa6.16□□□□□ -1.42
RFTN1-211ENST00000495666 MYMXA0A1B0GTQ4 84 aa6.16□□□□□ -1.42
RFTN1-211ENST00000495666 LEPROTL1O95214 131 aa6.16□□□□□ -1.42
RFTN1-211ENST00000495666 Q8NBF4 154 aa6.16□□□□□ -1.42
RFTN1-211ENST00000495666 HERV-K104P63124 156 aa6.15□□□□□ -1.42
RFTN1-211ENST00000495666 MIEN1Q9BRT3 115 aa6.15□□□□□ -1.42
RFTN1-211ENST00000495666 MAP1LC3CQ9BXW4 147 aa6.15□□□□□ -1.42
RFTN1-211ENST00000495666 ZNF706Q9Y5V0 76 aaPredicted RBP6.15□□□□□ -1.42
RFTN1-211ENST00000495666 LGALS3P17931 250 aaKnown RBP6.14□□□□□ -1.43
RFTN1-211ENST00000495666 S100A12P80511 92 aa6.14□□□□□ -1.43
RFTN1-211ENST00000495666 MOBPQ13875 183 aa6.14□□□□□ -1.43
RFTN1-211ENST00000495666 LEPROTO15243 131 aa6.13□□□□□ -1.43
RFTN1-211ENST00000495666 DDTP30046 118 aa6.13□□□□□ -1.43
RFTN1-211ENST00000495666 LINC00310P59036 64 aa6.13□□□□□ -1.43
RFTN1-211ENST00000495666 HERVK_113P61574 105 aa6.13□□□□□ -1.43
RFTN1-211ENST00000495666 J3QQQ9 107 aa6.12□□□□□ -1.43
RFTN1-211ENST00000495666 ERC2-IT1O76042 136 aa6.12□□□□□ -1.43
RFTN1-211ENST00000495666 DPM2O94777 84 aa6.12□□□□□ -1.43
RFTN1-211ENST00000495666 S100A7L2Q5SY68 101 aa6.12□□□□□ -1.43
RFTN1-211ENST00000495666 SLC7A5P1Q8MH63 180 aa6.12□□□□□ -1.43
RFTN1-211ENST00000495666 LINC00587B1AMM8 73 aa6.11□□□□□ -1.43
RFTN1-211ENST00000495666 IGKCP01834 107 aa6.11□□□□□ -1.43
RFTN1-211ENST00000495666 TPRXLQ17RH7 258 aa6.11□□□□□ -1.43
RFTN1-211ENST00000495666 C9orf153Q5TBE3 101 aa6.11□□□□□ -1.43
RFTN1-211ENST00000495666 LINC00337Q8N6G1 96 aa6.11□□□□□ -1.43
RFTN1-211ENST00000495666 HSPB8Q9UJY1 196 aa6.11□□□□□ -1.43
RFTN1-211ENST00000495666 B5MCH6 92 aa6.1□□□□□ -1.43
RFTN1-211ENST00000495666 PLNP26678 52 aa6.1□□□□□ -1.43
RFTN1-211ENST00000495666 KCNQ1DNQ9H478 68 aa6.1□□□□□ -1.43
RFTN1-211ENST00000495666 SPRR1AP35321 89 aa6.09□□□□□ -1.43
RFTN1-211ENST00000495666 SPAG11AQ6PDA7 123 aa6.09□□□□□ -1.43
RFTN1-211ENST00000495666 KRTAP4-16G5E9R7 235 aaPredicted RBP6.08□□□□□ -1.44
RFTN1-211ENST00000495666 OR13C6PQ8NH95 151 aa6.08□□□□□ -1.44
RFTN1-211ENST00000495666 Q9BRP9 147 aa6.08□□□□□ -1.44
RFTN1-211ENST00000495666 SPANXB1Q9NS25 103 aaPredicted RBP6.08□□□□□ -1.44
RFTN1-211ENST00000495666 TRAV23DV6A0A075B6W5 121 aa6.07□□□□□ -1.44
RFTN1-211ENST00000495666 EIF4EBP3O60516 100 aaPredicted RBP6.07□□□□□ -1.44
RFTN1-211ENST00000495666 SOSTDC1Q6X4U4 206 aa6.07□□□□□ -1.44
RFTN1-211ENST00000495666 ST20-AS1Q8NBB2 130 aa6.07□□□□□ -1.44
RFTN1-211ENST00000495666 A0A0J9YXY3 114 aa6.06□□□□□ -1.44
RFTN1-211ENST00000495666 ADAMTSL4-AS1Q5T5F5 129 aa6.06□□□□□ -1.44
RFTN1-211ENST00000495666 HRCT1Q6UXD1 115 aa6.06□□□□□ -1.44
RFTN1-211ENST00000495666 Q6ZRX8 168 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms