RNA–Protein interactions for RNA: ENST00000495532.1

HLA-DOA-206, Transcript of major histocompatibility complex, class II, DO alpha, humanhuman

Gene HLA-DOA, Length 545 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOA-206ENST00000495532 SND1-IT1Q9HBX3 110 aa6.03□□□□□ -1.44
HLA-DOA-206ENST00000495532 C9orf92A6NGG3 77 aa6.02□□□□□ -1.45
HLA-DOA-206ENST00000495532 PRSS47A8MTI9 375 aa6.02□□□□□ -1.45
HLA-DOA-206ENST00000495532 F8W036 122 aa6.02□□□□□ -1.45
HLA-DOA-206ENST00000495532 CFC1P0CG37 223 aa6.02□□□□□ -1.45
HLA-DOA-206ENST00000495532 RPL24P83731 157 aaKnown RBP6.02□□□□□ -1.45
HLA-DOA-206ENST00000495532 SSBP3-AS1Q7Z2R9 100 aa6.02□□□□□ -1.45
HLA-DOA-206ENST00000495532 SVBPQ8N300 66 aa6.02□□□□□ -1.45
HLA-DOA-206ENST00000495532 PRELID3AQ96N28 172 aa6.02□□□□□ -1.45
HLA-DOA-206ENST00000495532 IGLV5-45A0A087WSX0 123 aa6.01□□□□□ -1.45
HLA-DOA-206ENST00000495532 IGLV9-49A0A0B4J1Y8 123 aa6.01□□□□□ -1.45
HLA-DOA-206ENST00000495532 A0A1B0GXF2 115 aa6.01□□□□□ -1.45
HLA-DOA-206ENST00000495532 SNAPINO95295 136 aa6.01□□□□□ -1.45
HLA-DOA-206ENST00000495532 PFN2P35080 140 aa6.01□□□□□ -1.45
HLA-DOA-206ENST00000495532 MRPL54Q6P161 138 aaKnown RBP6.01□□□□□ -1.45
HLA-DOA-206ENST00000495532 TMEM136Q6ZRR5 245 aa6.01□□□□□ -1.45
HLA-DOA-206ENST00000495532 SMCR5Q8TEV8 140 aa6.01□□□□□ -1.45
HLA-DOA-206ENST00000495532 KRTAP9-8Q9BYQ0 159 aa6.01□□□□□ -1.45
HLA-DOA-206ENST00000495532 LOC389332A0A1B0GUA5 103 aa6□□□□□ -1.45
HLA-DOA-206ENST00000495532 ATP5LO75964 103 aa6□□□□□ -1.45
HLA-DOA-206ENST00000495532 APOC3P02656 99 aa5.99□□□□□ -1.45
HLA-DOA-206ENST00000495532 S100A8P05109 93 aa5.99□□□□□ -1.45
HLA-DOA-206ENST00000495532 SPINK8P0C7L1 97 aa5.99□□□□□ -1.45
HLA-DOA-206ENST00000495532 RHEBQ15382 184 aa5.99□□□□□ -1.45
HLA-DOA-206ENST00000495532 GAGE2AQ6NT46 116 aa5.99□□□□□ -1.45
HLA-DOA-206ENST00000495532 Q8N8P6 123 aa5.99□□□□□ -1.45
HLA-DOA-206ENST00000495532 TINCRA0A1B0GVN0 87 aa5.98□□□□□ -1.45
HLA-DOA-206ENST00000495532 ORMDL2Q53FV1 153 aa5.98□□□□□ -1.45
HLA-DOA-206ENST00000495532 PAPPA-AS1Q5QFB9 102 aa5.98□□□□□ -1.45
HLA-DOA-206ENST00000495532 NAT8Q9UHE5 227 aa5.98□□□□□ -1.45
HLA-DOA-206ENST00000495532 SPRR1AP35321 89 aa5.97□□□□□ -1.45
HLA-DOA-206ENST00000495532 RPL23P62829 140 aaKnown RBP5.97□□□□□ -1.45
HLA-DOA-206ENST00000495532 TIMM17AQ99595 171 aa5.97□□□□□ -1.45
HLA-DOA-206ENST00000495532 MAP1LC3AQ9H492 121 aa5.97□□□□□ -1.45
HLA-DOA-206ENST00000495532 ERG28Q9UKR5 140 aa5.97□□□□□ -1.45
HLA-DOA-206ENST00000495532 LAMTOR2Q9Y2Q5 125 aa5.96□□□□□ -1.46
HLA-DOA-206ENST00000495532 PRYO14603 147 aa5.95□□□□□ -1.46
HLA-DOA-206ENST00000495532 K7EMI3 77 aa5.94□□□□□ -1.46
HLA-DOA-206ENST00000495532 LCE2BO14633 110 aa5.94□□□□□ -1.46
HLA-DOA-206ENST00000495532 ERC2-IT1O76042 136 aa5.94□□□□□ -1.46
HLA-DOA-206ENST00000495532 IGLV6-57P01721 117 aa5.94□□□□□ -1.46
HLA-DOA-206ENST00000495532 COX17Q14061 63 aa5.94□□□□□ -1.46
HLA-DOA-206ENST00000495532 ADIRFQ15847 76 aa5.94□□□□□ -1.46
HLA-DOA-206ENST00000495532 ANAPC16Q96DE5 110 aa5.94□□□□□ -1.46
HLA-DOA-206ENST00000495532 RPL37P61927 97 aaKnown RBP5.93□□□□□ -1.46
HLA-DOA-206ENST00000495532 TOMM6Q96B49 74 aa5.93□□□□□ -1.46
HLA-DOA-206ENST00000495532 YPEL4Q96NS1 127 aa5.93□□□□□ -1.46
HLA-DOA-206ENST00000495532 SMCO4Q9NRQ5 59 aa5.93□□□□□ -1.46
HLA-DOA-206ENST00000495532 IGLV5-39A0A0G2JS06 123 aa5.92□□□□□ -1.46
HLA-DOA-206ENST00000495532 MT-ND4LP03901 98 aa5.92□□□□□ -1.46
HLA-DOA-206ENST00000495532 KCNQ1DNQ9H478 68 aa5.92□□□□□ -1.46
HLA-DOA-206ENST00000495532 ETDCA0A1B0GVM5 59 aa5.91□□□□□ -1.46
HLA-DOA-206ENST00000495532 C9orf153Q5TBE3 101 aa5.91□□□□□ -1.46
HLA-DOA-206ENST00000495532 ERASQ7Z444 233 aa5.91□□□□□ -1.46
HLA-DOA-206ENST00000495532 ATP5L2Q7Z4Y8 100 aa5.91□□□□□ -1.46
HLA-DOA-206ENST00000495532 ZNF625Q96I27 306 aaPredicted RBP5.91□□□□□ -1.46
HLA-DOA-206ENST00000495532 MRPL18Q9H0U6 180 aaKnown RBP5.91□□□□□ -1.46
HLA-DOA-206ENST00000495532 TRAV9-1A0A075B6T8 112 aa5.9□□□□□ -1.46
HLA-DOA-206ENST00000495532 COLCA2A8K830 154 aa5.9□□□□□ -1.46
HLA-DOA-206ENST00000495532 CST9LQ9H4G1 147 aa5.9□□□□□ -1.46
HLA-DOA-206ENST00000495532 RPS10P5Q9NQ39 176 aa5.9□□□□□ -1.46
HLA-DOA-206ENST00000495532 B5MCH6 92 aa5.89□□□□□ -1.47
HLA-DOA-206ENST00000495532 H3BRM9 83 aa5.89□□□□□ -1.47
HLA-DOA-206ENST00000495532 SCGB3A1Q96QR1 104 aa5.89□□□□□ -1.47
HLA-DOA-206ENST00000495532 LIMD2Q9BT23 127 aa5.89□□□□□ -1.47
HLA-DOA-206ENST00000495532 NXT2Q9NPJ8 142 aaKnown RBP5.89□□□□□ -1.47
HLA-DOA-206ENST00000495532 G0S2P27469 103 aa5.88□□□□□ -1.47
HLA-DOA-206ENST00000495532 Q9BRP9 147 aa5.88□□□□□ -1.47
HLA-DOA-206ENST00000495532 Q6Q795 121 aa5.87□□□□□ -1.47
HLA-DOA-206ENST00000495532 TRBV10-3A0A0K0K1G6 114 aa5.86□□□□□ -1.47
HLA-DOA-206ENST00000495532 NCR3O14931 201 aa5.86□□□□□ -1.47
HLA-DOA-206ENST00000495532 MT2AP02795 61 aa5.86□□□□□ -1.47
HLA-DOA-206ENST00000495532 KRTAP6-3Q3LI67 103 aa5.86□□□□□ -1.47
HLA-DOA-206ENST00000495532 S100PP25815 95 aa5.85□□□□□ -1.47
HLA-DOA-206ENST00000495532 PMVKQ15126 192 aa5.85□□□□□ -1.47
HLA-DOA-206ENST00000495532 IGLC3P0DOY3 106 aa5.84□□□□□ -1.47
HLA-DOA-206ENST00000495532 ZNF22P17026 224 aaPredicted RBP5.84□□□□□ -1.47
HLA-DOA-206ENST00000495532 LINC00158P58513 81 aa5.84□□□□□ -1.47
HLA-DOA-206ENST00000495532 COX19Q49B96 90 aa5.84□□□□□ -1.47
HLA-DOA-206ENST00000495532 HRCT1Q6UXD1 115 aa5.84□□□□□ -1.47
HLA-DOA-206ENST00000495532 Q6ZRX8 168 aa5.84□□□□□ -1.47
HLA-DOA-206ENST00000495532 BOD1L2Q8IYS8 172 aa5.84□□□□□ -1.47
HLA-DOA-206ENST00000495532 KRTAP9-3Q9BYQ3 159 aa5.84□□□□□ -1.47
HLA-DOA-206ENST00000495532 A0A0U1RRA0 63 aa5.83□□□□□ -1.48
HLA-DOA-206ENST00000495532 SFTA2Q6UW10 78 aa5.83□□□□□ -1.48
HLA-DOA-206ENST00000495532 MT1FP04733 61 aa5.82□□□□□ -1.48
HLA-DOA-206ENST00000495532 KRTAP19-6Q3LI70 58 aa5.81□□□□□ -1.48
HLA-DOA-206ENST00000495532 KIAA1644Q3SXP7 199 aa5.8□□□□□ -1.48
HLA-DOA-206ENST00000495532 ST20-AS1Q8NBB2 130 aa5.8□□□□□ -1.48
HLA-DOA-206ENST00000495532 LINC01549A6NIU2 74 aa5.79□□□□□ -1.48
HLA-DOA-206ENST00000495532 CHTOPQ9Y3Y2 248 aaKnown RBP5.79□□□□□ -1.48
HLA-DOA-206ENST00000495532 LINC01546A6NGU7 62 aa5.78□□□□□ -1.48
HLA-DOA-206ENST00000495532 SMIM13P0DJ93 91 aa5.78□□□□□ -1.48
HLA-DOA-206ENST00000495532 NEBP20929 6669 aa5.78□□□□□ -1.48
HLA-DOA-206ENST00000495532 S100A12P80511 92 aa5.78□□□□□ -1.48
HLA-DOA-206ENST00000495532 COA6Q5JTJ3 125 aaKnown RBP5.77□□□□□ -1.49
HLA-DOA-206ENST00000495532 C1orf195Q5TG92 126 aa5.77□□□□□ -1.49
HLA-DOA-206ENST00000495532 MIR7-3HGQ8N6C7 128 aa5.77□□□□□ -1.49
HLA-DOA-206ENST00000495532 LINC00846Q9NV44 126 aa5.77□□□□□ -1.49
HLA-DOA-206ENST00000495532 TRGC2P03986 189 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms