RNA–Protein interactions for RNA: ENST00000494623.1

CHMP3-209, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2

Gene CHMP3, Length 2,724 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-209ENST00000494623 C6orf99Q4VX62 202 aa7.55□□□□□ -1.2
CHMP3-209ENST00000494623 Q8N814 137 aa7.55□□□□□ -1.2
CHMP3-209ENST00000494623 A0A0J9YWU9 116 aa7.54□□□□□ -1.2
CHMP3-209ENST00000494623 TRBV7-7A0A0K0K1E9 115 aa7.54□□□□□ -1.2
CHMP3-209ENST00000494623 KRTAP24-1Q3LI83 254 aa7.53□□□□□ -1.2
CHMP3-209ENST00000494623 OBSCN-AS1Q96MR7 158 aa7.53□□□□□ -1.2
CHMP3-209ENST00000494623 RPL18AQ02543 176 aaKnown RBP7.53□□□□□ -1.2
CHMP3-209ENST00000494623 HIGD2BQ4VC39 106 aa7.53□□□□□ -1.2
CHMP3-209ENST00000494623 C3orf56Q8N813 242 aa7.53□□□□□ -1.2
CHMP3-209ENST00000494623 XAGE1AQ9HD64 81 aa7.52□□□□□ -1.21
CHMP3-209ENST00000494623 C6orf48Q9UBA6 75 aa7.52□□□□□ -1.21
CHMP3-209ENST00000494623 PKD1L1Q8TDX9 2849 aa7.52□□□□□ -1.21
CHMP3-209ENST00000494623 ESRGQ1W209 222 aa7.51□□□□□ -1.21
CHMP3-209ENST00000494623 SDIM1Q6ZPB5 146 aa7.51□□□□□ -1.21
CHMP3-209ENST00000494623 FLNBO75369 2602 aaKnown RBP7.51□□□□□ -1.21
CHMP3-209ENST00000494623 A0A1B0GX51 115 aa7.51□□□□□ -1.21
CHMP3-209ENST00000494623 ZNF561-AS1K7EIQ3 104 aa7.51□□□□□ -1.21
CHMP3-209ENST00000494623 LINC00167Q96N53 147 aa7.51□□□□□ -1.21
CHMP3-209ENST00000494623 H3BNG1 76 aa7.5□□□□□ -1.21
CHMP3-209ENST00000494623 STAB1Q9NY15 2570 aa7.5□□□□□ -1.21
CHMP3-209ENST00000494623 FBN1P35555 2871 aaKnown RBP7.5□□□□□ -1.21
CHMP3-209ENST00000494623 ANK2Q01484 3957 aa7.5□□□□□ -1.21
CHMP3-209ENST00000494623 IMUPQ9GZP8 106 aa7.5□□□□□ -1.21
CHMP3-209ENST00000494623 FAM236AA0A1B0GUQ0 79 aa7.5□□□□□ -1.21
CHMP3-209ENST00000494623 FAM236BA0A1B0GV22 79 aa7.5□□□□□ -1.21
CHMP3-209ENST00000494623 TMEM256-PLSCR3K7ERE1 68 aa7.5□□□□□ -1.21
CHMP3-209ENST00000494623 EGFEM1PQ0D2K5 195 aa7.5□□□□□ -1.21
CHMP3-209ENST00000494623 GVQW2A0A096LPI5 108 aaPredicted RBP7.49□□□□□ -1.21
CHMP3-209ENST00000494623 MUC7Q8TAX7 377 aa7.49□□□□□ -1.21
CHMP3-209ENST00000494623 CAMK2N2Q96S95 79 aa7.49□□□□□ -1.21
CHMP3-209ENST00000494623 LINC00846Q9NV44 126 aa7.49□□□□□ -1.21
CHMP3-209ENST00000494623 DEFB131BA0A096LNP1 70 aa7.49□□□□□ -1.21
CHMP3-209ENST00000494623 LINC00575Q6W349 94 aa7.49□□□□□ -1.21
CHMP3-209ENST00000494623 TENM3Q9P273 2699 aa7.48□□□□□ -1.21
CHMP3-209ENST00000494623 LOC107984640A0A0U1RRK4 108 aa7.48□□□□□ -1.21
CHMP3-209ENST00000494623 hADV29S1A0JD25 119 aa7.48□□□□□ -1.21
CHMP3-209ENST00000494623 IGLV6-57P01721 117 aa7.48□□□□□ -1.21
CHMP3-209ENST00000494623 C11orf45Q8TAV5 145 aa7.48□□□□□ -1.21
CHMP3-209ENST00000494623 KRTAP26-1Q6PEX3 210 aa7.47□□□□□ -1.21
CHMP3-209ENST00000494623 IGKV3D-7A0A0C4DH55 119 aa7.47□□□□□ -1.21
CHMP3-209ENST00000494623 TRBV10-3A0A0K0K1G6 114 aa7.47□□□□□ -1.21
CHMP3-209ENST00000494623 JMJD7-PLA2G4BH0Y9G9 81 aa7.47□□□□□ -1.21
CHMP3-209ENST00000494623 CCKP06307 115 aa7.46□□□□□ -1.21
CHMP3-209ENST00000494623 Q6ZRU5 148 aa7.46□□□□□ -1.21
CHMP3-209ENST00000494623 IGKV2D-24A0A075B6R9 120 aa7.45□□□□□ -1.22
CHMP3-209ENST00000494623 C15orf56Q8N910 161 aa7.45□□□□□ -1.22
CHMP3-209ENST00000494623 C1orf43Q9BWL3 253 aa7.45□□□□□ -1.22
CHMP3-209ENST00000494623 CMYA5Q8N3K9 4069 aa7.45□□□□□ -1.22
CHMP3-209ENST00000494623 TRAV23DV6A0A075B6W5 121 aa7.44□□□□□ -1.22
CHMP3-209ENST00000494623 PRB2P02812 416 aaPredicted RBP7.44□□□□□ -1.22
CHMP3-209ENST00000494623 FAM19A5Q7Z5A7 132 aaPredicted RBP7.44□□□□□ -1.22
CHMP3-209ENST00000494623 LAMTOR3Q9UHA4 124 aa7.43□□□□□ -1.22
CHMP3-209ENST00000494623 MAST4O15021 2626 aa7.43□□□□□ -1.22
CHMP3-209ENST00000494623 F8WDY8 70 aa7.43□□□□□ -1.22
CHMP3-209ENST00000494623 LINC01556Q5JQF7 62 aa7.43□□□□□ -1.22
CHMP3-209ENST00000494623 Q6ZQY7 126 aa7.43□□□□□ -1.22
CHMP3-209ENST00000494623 DIRC1Q969H9 104 aa7.43□□□□□ -1.22
CHMP3-209ENST00000494623 NOTCH1P46531 2555 aa7.42□□□□□ -1.22
CHMP3-209ENST00000494623 ZNF73O43830 326 aaPredicted RBP7.42□□□□□ -1.22
CHMP3-209ENST00000494623 VPREB1P12018 145 aa7.42□□□□□ -1.22
CHMP3-209ENST00000494623 RBM3P98179 157 aaKnown RBP7.41□□□□□ -1.22
CHMP3-209ENST00000494623 Q6JHZ5 121 aa7.41□□□□□ -1.22
CHMP3-209ENST00000494623 NDUFC2-KCTD14E9PQ53 114 aa7.41□□□□□ -1.22
CHMP3-209ENST00000494623 C2orf48Q96LS8 159 aa7.41□□□□□ -1.22
CHMP3-209ENST00000494623 COX7BP24311 80 aa7.4□□□□□ -1.22
CHMP3-209ENST00000494623 Q6ZRP5 223 aa7.4□□□□□ -1.23
CHMP3-209ENST00000494623 MRAPQ8TCY5 172 aa7.4□□□□□ -1.23
CHMP3-209ENST00000494623 A0A087WVE0 104 aa7.39□□□□□ -1.23
CHMP3-209ENST00000494623 M0R378 163 aa7.39□□□□□ -1.23
CHMP3-209ENST00000494623 SYCNQ0VAF6 134 aa7.38□□□□□ -1.23
CHMP3-209ENST00000494623 HIST1H4AP62805 103 aaKnown RBP7.37□□□□□ -1.23
CHMP3-209ENST00000494623 DNAH10OSP0CZ25 163 aa7.37□□□□□ -1.23
CHMP3-209ENST00000494623 ELOF1P60002 83 aaKnown RBP7.37□□□□□ -1.23
CHMP3-209ENST00000494623 Q6ZQT0 140 aa7.37□□□□□ -1.23
CHMP3-209ENST00000494623 COL6A5A8TX70 2615 aa7.37□□□□□ -1.23
CHMP3-209ENST00000494623 TRAV10A0A0B4J240 114 aa7.36□□□□□ -1.23
CHMP3-209ENST00000494623 DSCR8Q96T75 97 aa7.36□□□□□ -1.23
CHMP3-209ENST00000494623 LINC00588Q9Y4M8 146 aa7.36□□□□□ -1.23
CHMP3-209ENST00000494623 M0R2N4 97 aa7.36□□□□□ -1.23
CHMP3-209ENST00000494623 J3KT08 172 aa7.36□□□□□ -1.23
CHMP3-209ENST00000494623 UBL5Q9BZL1 73 aa7.36□□□□□ -1.23
CHMP3-209ENST00000494623 DNAH3Q8TD57 4116 aa7.35□□□□□ -1.23
CHMP3-209ENST00000494623 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.35□□□□□ -1.23
CHMP3-209ENST00000494623 C3orf22Q8N5N4 141 aa7.35□□□□□ -1.23
CHMP3-209ENST00000494623 LOC110117498A0A087WWA1 95 aa7.34□□□□□ -1.23
CHMP3-209ENST00000494623 H3BQ85 93 aa7.34□□□□□ -1.23
CHMP3-209ENST00000494623 ATOX1O00244 68 aa7.34□□□□□ -1.23
CHMP3-209ENST00000494623 CASC10Q5T4H9 136 aa7.34□□□□□ -1.23
CHMP3-209ENST00000494623 TRBV7-6A0A0J9YX20 115 aa7.33□□□□□ -1.24
CHMP3-209ENST00000494623 UQCRQO14949 82 aa7.33□□□□□ -1.24
CHMP3-209ENST00000494623 C9orf153Q5TBE3 101 aa7.33□□□□□ -1.24
CHMP3-209ENST00000494623 SERTAD4-AS1Q5TG53 156 aa7.33□□□□□ -1.24
CHMP3-209ENST00000494623 NKAPP1Q8N9T2 125 aa7.33□□□□□ -1.24
CHMP3-209ENST00000494623 NBEAL1Q6ZS30 2694 aa7.33□□□□□ -1.24
CHMP3-209ENST00000494623 FAM19A1Q7Z5A9 133 aa7.32□□□□□ -1.24
CHMP3-209ENST00000494623 LINC00528Q8N1L1 170 aa7.32□□□□□ -1.24
CHMP3-209ENST00000494623 USP17L23D6RBM5 183 aa7.32□□□□□ -1.24
CHMP3-209ENST00000494623 K7EIL1 84 aa7.32□□□□□ -1.24
CHMP3-209ENST00000494623 COX7CP15954 63 aa7.32□□□□□ -1.24
CHMP3-209ENST00000494623 TM2D3Q9BRN9 247 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms