RNA–Protein interactions for RNA: ENST00000494028.1

CLCN6-208, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 5

Gene CLCN6, Length 773 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-208ENST00000494028 CARD19Q96LW7 228 aa7.06□□□□□ -1.28
CLCN6-208ENST00000494028 CAMK2N2Q96S95 79 aa7.06□□□□□ -1.28
CLCN6-208ENST00000494028 NCR3O14931 201 aa7.05□□□□□ -1.28
CLCN6-208ENST00000494028 TRACP01848 142 aa7.05□□□□□ -1.28
CLCN6-208ENST00000494028 DNAH1Q9P2D7 4330 aa7.05□□□□□ -1.28
CLCN6-208ENST00000494028 ZNF561-AS1K7EIQ3 104 aa7.04□□□□□ -1.28
CLCN6-208ENST00000494028 OR13C6PQ8NH95 151 aa7.04□□□□□ -1.28
CLCN6-208ENST00000494028 VPS25Q9BRG1 176 aa7.04□□□□□ -1.28
CLCN6-208ENST00000494028 F8WDY8 70 aa7.03□□□□□ -1.28
CLCN6-208ENST00000494028 J3QR89 54 aa7.03□□□□□ -1.28
CLCN6-208ENST00000494028 PRR3P79522 188 aaKnown RBP7.03□□□□□ -1.28
CLCN6-208ENST00000494028 DYNC2H1Q8NCM8 4307 aaKnown RBP7.03□□□□□ -1.28
CLCN6-208ENST00000494028 A0A087WYN8 130 aa7.02□□□□□ -1.29
CLCN6-208ENST00000494028 CASC10Q5T4H9 136 aa7.02□□□□□ -1.29
CLCN6-208ENST00000494028 APLNQ9ULZ1 77 aa7.02□□□□□ -1.29
CLCN6-208ENST00000494028 STAB2Q8WWQ8 2551 aa7.01□□□□□ -1.29
CLCN6-208ENST00000494028 RMI2Q96E14 147 aa7.01□□□□□ -1.29
CLCN6-208ENST00000494028 KRTAP1-5Q9BYS1 174 aa7.01□□□□□ -1.29
CLCN6-208ENST00000494028 USP17L23D6RBM5 183 aa7□□□□□ -1.29
CLCN6-208ENST00000494028 VPREB1P12018 145 aa7□□□□□ -1.29
CLCN6-208ENST00000494028 XAGE1AQ9HD64 81 aa7□□□□□ -1.29
CLCN6-208ENST00000494028 COL7A1Q02388 2944 aa7□□□□□ -1.29
CLCN6-208ENST00000494028 NDUFC2-KCTD14E9PQ53 114 aa6.99□□□□□ -1.29
CLCN6-208ENST00000494028 H0YGX0 51 aa6.99□□□□□ -1.29
CLCN6-208ENST00000494028 IGLV6-57P01721 117 aa6.99□□□□□ -1.29
CLCN6-208ENST00000494028 RPL18AQ02543 176 aaKnown RBP6.99□□□□□ -1.29
CLCN6-208ENST00000494028 SYCNQ0VAF6 134 aa6.99□□□□□ -1.29
CLCN6-208ENST00000494028 TMEM126AQ9H061 195 aa6.99□□□□□ -1.29
CLCN6-208ENST00000494028 C22orf24Q9Y442 160 aa6.99□□□□□ -1.29
CLCN6-208ENST00000494028 NHLRC4P0CG21 123 aaPredicted RBP6.98□□□□□ -1.29
CLCN6-208ENST00000494028 CBY1Q9Y3M2 126 aa6.98□□□□□ -1.29
CLCN6-208ENST00000494028 TEX49A0A1B0GTD5 131 aa6.97□□□□□ -1.29
CLCN6-208ENST00000494028 NUPR2A6NF83 97 aa6.97□□□□□ -1.29
CLCN6-208ENST00000494028 LECT2O14960 151 aa6.97□□□□□ -1.29
CLCN6-208ENST00000494028 S100A7L2Q5SY68 101 aa6.97□□□□□ -1.29
CLCN6-208ENST00000494028 Q6ZRP5 223 aa6.97□□□□□ -1.29
CLCN6-208ENST00000494028 UBE2DNLQ8IWF7 75 aa6.97□□□□□ -1.29
CLCN6-208ENST00000494028 LINC00167Q96N53 147 aa6.97□□□□□ -1.29
CLCN6-208ENST00000494028 DNAL4O96015 105 aa6.96□□□□□ -1.3
CLCN6-208ENST00000494028 C6orf99Q4VX62 202 aa6.96□□□□□ -1.3
CLCN6-208ENST00000494028 CDIP1Q9H305 208 aa6.96□□□□□ -1.3
CLCN6-208ENST00000494028 TRBV10-3A0A0K0K1G6 114 aa6.95□□□□□ -1.3
CLCN6-208ENST00000494028 A0A1B0GX51 115 aa6.95□□□□□ -1.3
CLCN6-208ENST00000494028 SLPIP03973 132 aa6.95□□□□□ -1.3
CLCN6-208ENST00000494028 TLX1NBP0CAT3 122 aa6.95□□□□□ -1.3
CLCN6-208ENST00000494028 C9orf129Q5T035 196 aaKnown RBP6.95□□□□□ -1.3
CLCN6-208ENST00000494028 TRAV23DV6A0A075B6W5 121 aa6.94□□□□□ -1.3
CLCN6-208ENST00000494028 BAALC-AS2P0C853 105 aa6.94□□□□□ -1.3
CLCN6-208ENST00000494028 GAGE2EQ4V326 116 aa6.94□□□□□ -1.3
CLCN6-208ENST00000494028 GAGE2DQ9UEU5 116 aa6.94□□□□□ -1.3
CLCN6-208ENST00000494028 TGP01266 2768 aa6.92□□□□□ -1.3
CLCN6-208ENST00000494028 M0R378 163 aa6.92□□□□□ -1.3
CLCN6-208ENST00000494028 DIRC1Q969H9 104 aa6.92□□□□□ -1.3
CLCN6-208ENST00000494028 SERTAD4-AS1Q5TG53 156 aa6.91□□□□□ -1.3
CLCN6-208ENST00000494028 LINC00575Q6W349 94 aa6.91□□□□□ -1.3
CLCN6-208ENST00000494028 IGLV5-37A0A075B6J1 123 aa6.9□□□□□ -1.3
CLCN6-208ENST00000494028 FAM240AA0A1B0GVK7 77 aa6.9□□□□□ -1.3
CLCN6-208ENST00000494028 Q8N814 137 aa6.9□□□□□ -1.3
CLCN6-208ENST00000494028 ORMDL1Q9P0S3 153 aa6.9□□□□□ -1.3
CLCN6-208ENST00000494028 PLA2G2DQ9UNK4 145 aa6.9□□□□□ -1.3
CLCN6-208ENST00000494028 ZNF73O43830 326 aaPredicted RBP6.89□□□□□ -1.31
CLCN6-208ENST00000494028 XGP55808 180 aa6.89□□□□□ -1.31
CLCN6-208ENST00000494028 TTC32Q5I0X7 151 aa6.89□□□□□ -1.31
CLCN6-208ENST00000494028 OBSCN-AS1Q96MR7 158 aa6.89□□□□□ -1.31
CLCN6-208ENST00000494028 INAFM2P0DMQ5 153 aa6.88□□□□□ -1.31
CLCN6-208ENST00000494028 ELOF1P60002 83 aaKnown RBP6.88□□□□□ -1.31
CLCN6-208ENST00000494028 C7orf33Q8WU49 177 aa6.88□□□□□ -1.31
CLCN6-208ENST00000494028 DNAH7Q8WXX0 4024 aa6.87□□□□□ -1.31
CLCN6-208ENST00000494028 TRBV7-6A0A0J9YX20 115 aa6.87□□□□□ -1.31
CLCN6-208ENST00000494028 NBDYA0A0U1RRE5 68 aa6.87□□□□□ -1.31
CLCN6-208ENST00000494028 LOC107984640A0A0U1RRK4 108 aa6.87□□□□□ -1.31
CLCN6-208ENST00000494028 COX7BP24311 80 aa6.87□□□□□ -1.31
CLCN6-208ENST00000494028 CNBPP62633 177 aaKnown RBP6.87□□□□□ -1.31
CLCN6-208ENST00000494028 NKAPP1Q8N9T2 125 aa6.87□□□□□ -1.31
CLCN6-208ENST00000494028 hADV29S1A0JD25 119 aa6.86□□□□□ -1.31
CLCN6-208ENST00000494028 PSCAO43653 123 aa6.86□□□□□ -1.31
CLCN6-208ENST00000494028 MT-ATP8P03928 68 aa6.86□□□□□ -1.31
CLCN6-208ENST00000494028 Q6ZRN7 208 aaPredicted RBP6.86□□□□□ -1.31
CLCN6-208ENST00000494028 KRTAP7-1Q8IUC3 87 aa6.86□□□□□ -1.31
CLCN6-208ENST00000494028 SIGMAR1Q99720 223 aa6.86□□□□□ -1.31
CLCN6-208ENST00000494028 STARD9Q9P2P6 4700 aa6.86□□□□□ -1.31
CLCN6-208ENST00000494028 PLECQ15149 4684 aaKnown RBP6.86□□□□□ -1.31
CLCN6-208ENST00000494028 FAM168BA1KXE4 195 aa6.85□□□□□ -1.31
CLCN6-208ENST00000494028 GAGE2BQ13066 116 aa6.85□□□□□ -1.31
CLCN6-208ENST00000494028 LINC00528Q8N1L1 170 aa6.85□□□□□ -1.31
CLCN6-208ENST00000494028 VPS13DQ5THJ4 4388 aa6.84□□□□□ -1.31
CLCN6-208ENST00000494028 PRYO14603 147 aa6.84□□□□□ -1.31
CLCN6-208ENST00000494028 C14orf177Q52M58 125 aa6.84□□□□□ -1.31
CLCN6-208ENST00000494028 Q6ZQY7 126 aa6.84□□□□□ -1.31
CLCN6-208ENST00000494028 C14orf132Q9NPU4 83 aa6.84□□□□□ -1.31
CLCN6-208ENST00000494028 A0A096LNI7 61 aa6.83□□□□□ -1.32
CLCN6-208ENST00000494028 LRCOL1A6NCL2 159 aa6.83□□□□□ -1.32
CLCN6-208ENST00000494028 FAM19A5Q7Z5A7 132 aaPredicted RBP6.83□□□□□ -1.32
CLCN6-208ENST00000494028 KCNQ1DNQ9H478 68 aa6.83□□□□□ -1.32
CLCN6-208ENST00000494028 CSMD3Q7Z407 3707 aa6.83□□□□□ -1.32
CLCN6-208ENST00000494028 A0A1B0GV72 72 aa6.82□□□□□ -1.32
CLCN6-208ENST00000494028 TMEM256-PLSCR3K7ERE1 68 aa6.82□□□□□ -1.32
CLCN6-208ENST00000494028 PCP4P48539 62 aa6.82□□□□□ -1.32
CLCN6-208ENST00000494028 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.82□□□□□ -1.32
CLCN6-208ENST00000494028 DNAH10Q8IVF4 4471 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms