RNA–Protein interactions for RNA: ENST00000493815.5

PDLIM7-208, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best)

Gene PDLIM7, Length 1,686 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-208ENST00000493815 FAM229AH3BQW9 127 aa11.18□□□□□ -0.62
PDLIM7-208ENST00000493815 MIR7-3HGQ8N6C7 128 aa11.18□□□□□ -0.62
PDLIM7-208ENST00000493815 A0A0J9YXY3 114 aa11.17□□□□□ -0.62
PDLIM7-208ENST00000493815 M0QXV9 152 aa11.17□□□□□ -0.62
PDLIM7-208ENST00000493815 PCP2Q8IVA1 136 aa11.17□□□□□ -0.62
PDLIM7-208ENST00000493815 SRRM2Q9UQ35 2752 aaKnown RBP11.16□□□□□ -0.62
PDLIM7-208ENST00000493815 HSBP1L1C9JCN9 74 aa11.15□□□□□ -0.62
PDLIM7-208ENST00000493815 Q8NDZ9 215 aa11.15□□□□□ -0.62
PDLIM7-208ENST00000493815 C7orf33Q8WU49 177 aa11.15□□□□□ -0.62
PDLIM7-208ENST00000493815 C22orf24Q9Y442 160 aa11.15□□□□□ -0.62
PDLIM7-208ENST00000493815 LINC00587B1AMM8 73 aa11.14□□□□□ -0.63
PDLIM7-208ENST00000493815 ADAMTSL4-AS1Q5T5F5 129 aa11.14□□□□□ -0.63
PDLIM7-208ENST00000493815 RPL37AP61513 92 aaKnown RBP11.14□□□□□ -0.63
PDLIM7-208ENST00000493815 KRTAP11-1Q8IUC1 163 aa11.14□□□□□ -0.63
PDLIM7-208ENST00000493815 JOSD1Q15040 202 aaPredicted RBP11.13□□□□□ -0.63
PDLIM7-208ENST00000493815 KRTAP10-4P60372 401 aaPredicted RBP11.12□□□□□ -0.63
PDLIM7-208ENST00000493815 NPC2P61916 151 aa11.11□□□□□ -0.63
PDLIM7-208ENST00000493815 PLA2G2DQ9UNK4 145 aa11.11□□□□□ -0.63
PDLIM7-208ENST00000493815 ABCA13Q86UQ4 5058 aa11.11□□□□□ -0.63
PDLIM7-208ENST00000493815 GAGE10A6NGK3 116 aa11.11□□□□□ -0.63
PDLIM7-208ENST00000493815 PLA2G1BP04054 148 aaKnown RBP11.11□□□□□ -0.63
PDLIM7-208ENST00000493815 LITAFQ99732 161 aa11.11□□□□□ -0.63
PDLIM7-208ENST00000493815 EIF4EBP3O60516 100 aaPredicted RBP11.1□□□□□ -0.63
PDLIM7-208ENST00000493815 VPREB1P12018 145 aa11.1□□□□□ -0.63
PDLIM7-208ENST00000493815 SCGB1D4Q6XE38 83 aa11.1□□□□□ -0.63
PDLIM7-208ENST00000493815 BOD1L2Q8IYS8 172 aa11.1□□□□□ -0.63
PDLIM7-208ENST00000493815 TP73-AS1Q9UF72 201 aa11.1□□□□□ -0.63
PDLIM7-208ENST00000493815 UBE2BP63146 152 aa11.09□□□□□ -0.63
PDLIM7-208ENST00000493815 PRR3P79522 188 aaKnown RBP11.09□□□□□ -0.63
PDLIM7-208ENST00000493815 PYY3Q5JQD4 70 aa11.09□□□□□ -0.63
PDLIM7-208ENST00000493815 MRPL55Q7Z7F7 128 aaKnown RBP11.09□□□□□ -0.63
PDLIM7-208ENST00000493815 NKAPP1Q8N9T2 125 aa11.09□□□□□ -0.63
PDLIM7-208ENST00000493815 PAM16Q9Y3D7 125 aa11.08□□□□□ -0.64
PDLIM7-208ENST00000493815 IGLV5-37A0A075B6J1 123 aa11.08□□□□□ -0.64
PDLIM7-208ENST00000493815 RPL37AP8A6NKH3 93 aa11.08□□□□□ -0.64
PDLIM7-208ENST00000493815 LINC00167Q96N53 147 aa11.08□□□□□ -0.64
PDLIM7-208ENST00000493815 PSORS1C2Q9UIG4 136 aa11.08□□□□□ -0.64
PDLIM7-208ENST00000493815 RPL24P83731 157 aaKnown RBP11.07□□□□□ -0.64
PDLIM7-208ENST00000493815 SOSTDC1Q6X4U4 206 aa11.07□□□□□ -0.64
PDLIM7-208ENST00000493815 LINC00518Q8N0U6 118 aa11.07□□□□□ -0.64
PDLIM7-208ENST00000493815 TIMM17BO60830 172 aa11.06□□□□□ -0.64
PDLIM7-208ENST00000493815 LBHQ53QV2 105 aaPredicted RBP11.06□□□□□ -0.64
PDLIM7-208ENST00000493815 MIEN1Q9BRT3 115 aa11.05□□□□□ -0.64
PDLIM7-208ENST00000493815 VAMP8Q9BV40 100 aa11.05□□□□□ -0.64
PDLIM7-208ENST00000493815 NCR3O14931 201 aa11.04□□□□□ -0.64
PDLIM7-208ENST00000493815 HNRNPA3P51991 378 aaKnown RBP11.04□□□□□ -0.64
PDLIM7-208ENST00000493815 SPATA45Q537H7 98 aa11.04□□□□□ -0.64
PDLIM7-208ENST00000493815 PCLOQ9Y6V0 5065 aa11.04□□□□□ -0.64
PDLIM7-208ENST00000493815 IGKV2-28A0A075B6P5 120 aa11.04□□□□□ -0.64
PDLIM7-208ENST00000493815 IGKV2D-28P01615 120 aa11.04□□□□□ -0.64
PDLIM7-208ENST00000493815 LOC107984156A0A0G2JMH3 177 aa11.03□□□□□ -0.64
PDLIM7-208ENST00000493815 C1orf137Q5JT78 98 aa11.03□□□□□ -0.64
PDLIM7-208ENST00000493815 ARL17AQ8IVW1 177 aa11.03□□□□□ -0.64
PDLIM7-208ENST00000493815 LINC00308Q8TCZ7 52 aa11.03□□□□□ -0.64
PDLIM7-208ENST00000493815 C14orf144Q96I85 54 aa11.03□□□□□ -0.64
PDLIM7-208ENST00000493815 TMEM238C9JI98 176 aa11.01□□□□□ -0.65
PDLIM7-208ENST00000493815 COX8AP10176 69 aa11.01□□□□□ -0.65
PDLIM7-208ENST00000493815 INAFM2P0DMQ5 153 aa11□□□□□ -0.65
PDLIM7-208ENST00000493815 M0R378 163 aa10.99□□□□□ -0.65
PDLIM7-208ENST00000493815 SPANXDQ9BXN6 97 aa10.99□□□□□ -0.65
PDLIM7-208ENST00000493815 SPANXCQ9NY87 97 aa10.99□□□□□ -0.65
PDLIM7-208ENST00000493815 IGLV1-50A0A075B6I6 118 aa10.98□□□□□ -0.65
PDLIM7-208ENST00000493815 FLG2Q5D862 2391 aaPredicted RBP10.96□□□□□ -0.66
PDLIM7-208ENST00000493815 NDUFC2O95298 119 aa10.95□□□□□ -0.66
PDLIM7-208ENST00000493815 MUSTN1Q8IVN3 82 aa10.95□□□□□ -0.66
PDLIM7-208ENST00000493815 SPANXB1Q9NS25 103 aaPredicted RBP10.95□□□□□ -0.66
PDLIM7-208ENST00000493815 TRBV10-3A0A0K0K1G6 114 aa10.95□□□□□ -0.66
PDLIM7-208ENST00000493815 IGLV7-43P04211 117 aa10.95□□□□□ -0.66
PDLIM7-208ENST00000493815 SRSF9Q13242 221 aaKnown RBP eCLIP10.95□□□□□ -0.66
PDLIM7-208ENST00000493815 DLEU1O43261 78 aa10.94□□□□□ -0.66
PDLIM7-208ENST00000493815 MYCBP2O75592 4640 aa10.94□□□□□ -0.66
PDLIM7-208ENST00000493815 SLC25A34Q6PIV7 304 aa10.93□□□□□ -0.66
PDLIM7-208ENST00000493815 TRBV10-2A0A0K0K1G8 114 aa10.92□□□□□ -0.66
PDLIM7-208ENST00000493815 Q6ZVH6 145 aa10.92□□□□□ -0.66
PDLIM7-208ENST00000493815 TMEM126AQ9H061 195 aa10.92□□□□□ -0.66
PDLIM7-208ENST00000493815 PKHD1L1Q86WI1 4243 aa10.92□□□□□ -0.66
PDLIM7-208ENST00000493815 BCE1O60756 84 aa10.92□□□□□ -0.66
PDLIM7-208ENST00000493815 IFITM1P13164 125 aa10.92□□□□□ -0.66
PDLIM7-208ENST00000493815 REG3GQ6UW15 175 aa10.92□□□□□ -0.66
PDLIM7-208ENST00000493815 DDTP30046 118 aa10.91□□□□□ -0.66
PDLIM7-208ENST00000493815 S100A7L2Q5SY68 101 aa10.9□□□□□ -0.66
PDLIM7-208ENST00000493815 C2orf91Q6ZV80 131 aa10.89□□□□□ -0.67
PDLIM7-208ENST00000493815 COPS9Q8WXC6 57 aa10.89□□□□□ -0.67
PDLIM7-208ENST00000493815 HIST1H4GQ99525 98 aa10.89□□□□□ -0.67
PDLIM7-208ENST00000493815 SPINK6Q6UWN8 80 aa10.89□□□□□ -0.67
PDLIM7-208ENST00000493815 KCNQ1DNQ9H478 68 aa10.89□□□□□ -0.67
PDLIM7-208ENST00000493815 IGLV6-57P01721 117 aa10.88□□□□□ -0.67
PDLIM7-208ENST00000493815 LINC00337Q8N6G1 96 aa10.88□□□□□ -0.67
PDLIM7-208ENST00000493815 OR13C6PQ8NH95 151 aa10.88□□□□□ -0.67
PDLIM7-208ENST00000493815 PCP4L1A6NKN8 68 aa10.87□□□□□ -0.67
PDLIM7-208ENST00000493815 PRLHP81277 87 aa10.87□□□□□ -0.67
PDLIM7-208ENST00000493815 FAM19A1Q7Z5A9 133 aa10.87□□□□□ -0.67
PDLIM7-208ENST00000493815 LRP1Q07954 4544 aaKnown RBP10.86□□□□□ -0.67
PDLIM7-208ENST00000493815 ZNF861PO60384 105 aa10.86□□□□□ -0.67
PDLIM7-208ENST00000493815 UBE2AP49459 152 aa10.86□□□□□ -0.67
PDLIM7-208ENST00000493815 PRYO14603 147 aa10.85□□□□□ -0.67
PDLIM7-208ENST00000493815 SVIPQ8NHG7 77 aa10.85□□□□□ -0.67
PDLIM7-208ENST00000493815 PPDPFQ9H3Y8 114 aa10.85□□□□□ -0.67
PDLIM7-208ENST00000493815 HIGD1BQ9P298 99 aa10.85□□□□□ -0.67
PDLIM7-208ENST00000493815 A4D1N5 150 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms