RNA–Protein interactions for RNA: ENST00000493795.5

BRCA1-221, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 5,732 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-221ENST00000493795 GPR179Q6PRD1 2367 aa5.33□□□□□ -1.56
BRCA1-221ENST00000493795 WNK1Q9H4A3 2382 aa5.33□□□□□ -1.56
BRCA1-221ENST00000493795 FREM1Q5H8C1 2179 aa5.33□□□□□ -1.56
BRCA1-221ENST00000493795 CDSNQ15517 529 aa5.32□□□□□ -1.56
BRCA1-221ENST00000493795 HCFC1P51610 2035 aa5.32□□□□□ -1.56
BRCA1-221ENST00000493795 NBASA2RRP1 2371 aa5.32□□□□□ -1.56
BRCA1-221ENST00000493795 DSCAMO60469 2012 aa5.32□□□□□ -1.56
BRCA1-221ENST00000493795 ARHGAP32A7KAX9 2087 aa5.32□□□□□ -1.56
BRCA1-221ENST00000493795 LINC00483Q53H64 154 aa5.32□□□□□ -1.56
BRCA1-221ENST00000493795 IGLV5-37A0A075B6J1 123 aa5.32□□□□□ -1.56
BRCA1-221ENST00000493795 RBM12B-AS1Q9P1G2 102 aa5.32□□□□□ -1.56
BRCA1-221ENST00000493795 RIF1Q5UIP0 2472 aaKnown RBP5.32□□□□□ -1.56
BRCA1-221ENST00000493795 A0A0D9SG42 100 aa5.32□□□□□ -1.56
BRCA1-221ENST00000493795 KIF26AQ9ULI4 1882 aaPredicted RBP5.31□□□□□ -1.56
BRCA1-221ENST00000493795 TANC2Q9HCD6 1990 aa5.31□□□□□ -1.56
BRCA1-221ENST00000493795 A0A1B0GVX0 72 aa5.3□□□□□ -1.56
BRCA1-221ENST00000493795 PRR15Q8IV56 129 aa5.3□□□□□ -1.56
BRCA1-221ENST00000493795 LINC00304Q8N9R0 145 aa5.3□□□□□ -1.56
BRCA1-221ENST00000493795 OBSCN-AS1Q96MR7 158 aa5.3□□□□□ -1.56
BRCA1-221ENST00000493795 CSNK1G2-AS1Q8NCQ2 148 aa5.29□□□□□ -1.56
BRCA1-221ENST00000493795 C9orf92A6NGG3 77 aa5.29□□□□□ -1.56
BRCA1-221ENST00000493795 KLKP1Q107X0 134 aa5.29□□□□□ -1.56
BRCA1-221ENST00000493795 PCDH15Q96QU1 1955 aa5.29□□□□□ -1.56
BRCA1-221ENST00000493795 LINC00336Q6ZUF6 198 aa5.28□□□□□ -1.56
BRCA1-221ENST00000493795 FAM104AQ969W3 186 aa5.28□□□□□ -1.56
BRCA1-221ENST00000493795 NOTCH4Q99466 2003 aa5.28□□□□□ -1.56
BRCA1-221ENST00000493795 PTPRQQ9UMZ3 2332 aa5.28□□□□□ -1.56
BRCA1-221ENST00000493795 FAM208BQ5VWN6 2430 aa5.28□□□□□ -1.56
BRCA1-221ENST00000493795 IGFL1Q6UW32 110 aa5.28□□□□□ -1.56
BRCA1-221ENST00000493795 LINC00588Q9Y4M8 146 aa5.28□□□□□ -1.56
BRCA1-221ENST00000493795 PLXNB1O43157 2135 aa5.28□□□□□ -1.56
BRCA1-221ENST00000493795 IGLV1-50A0A075B6I6 118 aa5.28□□□□□ -1.56
BRCA1-221ENST00000493795 IGLV5-48A0A075B6I7 105 aa5.27□□□□□ -1.57
BRCA1-221ENST00000493795 FAM168BA1KXE4 195 aa5.27□□□□□ -1.57
BRCA1-221ENST00000493795 EML5Q05BV3 1969 aa5.27□□□□□ -1.57
BRCA1-221ENST00000493795 Q1T7F1 81 aa5.27□□□□□ -1.57
BRCA1-221ENST00000493795 KIAA1549LQ6ZVL6 1849 aa5.26□□□□□ -1.57
BRCA1-221ENST00000493795 KCNQ1DNQ9H478 68 aa5.26□□□□□ -1.57
BRCA1-221ENST00000493795 ATG2AQ2TAZ0 1938 aa5.26□□□□□ -1.57
BRCA1-221ENST00000493795 ZNF575Q86XF7 245 aa5.25□□□□□ -1.57
BRCA1-221ENST00000493795 A0A0A0MQY5 61 aa5.24□□□□□ -1.57
BRCA1-221ENST00000493795 EXPH5Q8NEV8 1989 aa5.24□□□□□ -1.57
BRCA1-221ENST00000493795 MUC4Q99102 2169 aa5.24□□□□□ -1.57
BRCA1-221ENST00000493795 SPANXA2-OT1Q8N9U9 137 aa5.24□□□□□ -1.57
BRCA1-221ENST00000493795 DNAH10OSP0CZ25 163 aa5.23□□□□□ -1.57
BRCA1-221ENST00000493795 LITAFQ99732 161 aa5.23□□□□□ -1.57
BRCA1-221ENST00000493795 AGRNO00468 2067 aa5.23□□□□□ -1.57
BRCA1-221ENST00000493795 LINC00528Q8N1L1 170 aa5.23□□□□□ -1.57
BRCA1-221ENST00000493795 PCNX3Q9H6A9 2034 aa5.23□□□□□ -1.57
BRCA1-221ENST00000493795 H7BZZ5 65 aa5.22□□□□□ -1.57
BRCA1-221ENST00000493795 WWC2-AS2Q96NR7 200 aa5.22□□□□□ -1.57
BRCA1-221ENST00000493795 ZNF861PO60384 105 aa5.22□□□□□ -1.57
BRCA1-221ENST00000493795 CSPG4Q6UVK1 2322 aa5.22□□□□□ -1.57
BRCA1-221ENST00000493795 A0A1W2PPR1 153 aa5.22□□□□□ -1.57
BRCA1-221ENST00000493795 Q8NAQ8 132 aa5.22□□□□□ -1.57
BRCA1-221ENST00000493795 CAMK2N1Q7Z7J9 78 aa5.21□□□□□ -1.58
BRCA1-221ENST00000493795 Q8N1X5 172 aa5.2□□□□□ -1.58
BRCA1-221ENST00000493795 ATRXP46100 2492 aa5.2□□□□□ -1.58
BRCA1-221ENST00000493795 RAI1Q7Z5J4 1906 aaPredicted RBP5.2□□□□□ -1.58
BRCA1-221ENST00000493795 TECTAO75443 2155 aa5.2□□□□□ -1.58
BRCA1-221ENST00000493795 C15orf56Q8N910 161 aa5.2□□□□□ -1.58
BRCA1-221ENST00000493795 ANKHD1Q8IWZ3 2542 aaKnown RBP5.19□□□□□ -1.58
BRCA1-221ENST00000493795 UTRNP46939 3433 aa5.18□□□□□ -1.58
BRCA1-221ENST00000493795 Q8N377 158 aa5.18□□□□□ -1.58
BRCA1-221ENST00000493795 COL5A1P20908 1838 aaPredicted RBP5.17□□□□□ -1.58
BRCA1-221ENST00000493795 PTPRSQ13332 1948 aa5.17□□□□□ -1.58
BRCA1-221ENST00000493795 OTOGLQ3ZCN5 2332 aa5.16□□□□□ -1.58
BRCA1-221ENST00000493795 CEP192Q8TEP8 1941 aa5.16□□□□□ -1.58
BRCA1-221ENST00000493795 C9orf163Q8N9P6 203 aa5.15□□□□□ -1.58
BRCA1-221ENST00000493795 PLA2G2DQ9UNK4 145 aa5.15□□□□□ -1.58
BRCA1-221ENST00000493795 H3BS24 57 aa5.15□□□□□ -1.59
BRCA1-221ENST00000493795 EP400Q96L91 3159 aa5.15□□□□□ -1.59
BRCA1-221ENST00000493795 A0A1B0GU33 70 aa5.14□□□□□ -1.59
BRCA1-221ENST00000493795 IGLV7-43P04211 117 aa5.14□□□□□ -1.59
BRCA1-221ENST00000493795 KRTAP24-1Q3LI83 254 aa5.14□□□□□ -1.59
BRCA1-221ENST00000493795 SONP18583 2426 aaKnown RBP5.14□□□□□ -1.59
BRCA1-221ENST00000493795 ZFHX2Q9C0A1 2572 aaPredicted RBP5.14□□□□□ -1.59
BRCA1-221ENST00000493795 A0A0G2JQZ4 141 aa5.13□□□□□ -1.59
BRCA1-221ENST00000493795 A0A1W2PNN7 141 aa5.13□□□□□ -1.59
BRCA1-221ENST00000493795 NAV3Q8IVL0 2385 aa5.13□□□□□ -1.59
BRCA1-221ENST00000493795 GOLGB1Q14789 3259 aaKnown RBP5.13□□□□□ -1.59
BRCA1-221ENST00000493795 SPG11Q96JI7 2443 aa5.13□□□□□ -1.59
BRCA1-221ENST00000493795 TLX1NBP0CAT3 122 aa5.12□□□□□ -1.59
BRCA1-221ENST00000493795 LTBP2Q14767 1821 aa5.12□□□□□ -1.59
BRCA1-221ENST00000493795 WIPF1O43516 503 aa5.12□□□□□ -1.59
BRCA1-221ENST00000493795 Q6ZSA8 131 aa5.12□□□□□ -1.59
BRCA1-221ENST00000493795 SPRR4Q96PI1 79 aa5.12□□□□□ -1.59
BRCA1-221ENST00000493795 HIVEP3Q5T1R4 2406 aa5.12□□□□□ -1.59
BRCA1-221ENST00000493795 COL4A4P53420 1690 aaPredicted RBP5.12□□□□□ -1.59
BRCA1-221ENST00000493795 DMAC1Q96GE9 116 aa5.11□□□□□ -1.59
BRCA1-221ENST00000493795 ANAPC11Q9NYG5 84 aa5.11□□□□□ -1.59
BRCA1-221ENST00000493795 A0A087WTM6 91 aa5.11□□□□□ -1.59
BRCA1-221ENST00000493795 PRR26Q8N8Z3 221 aa5.11□□□□□ -1.59
BRCA1-221ENST00000493795 SMR3BP02814 79 aaPredicted RBP5.1□□□□□ -1.59
BRCA1-221ENST00000493795 Q75L30 129 aa5.1□□□□□ -1.59
BRCA1-221ENST00000493795 LRP4O75096 1905 aa5.1□□□□□ -1.59
BRCA1-221ENST00000493795 HRES1P13985 223 aa5.1□□□□□ -1.59
BRCA1-221ENST00000493795 TET2Q6N021 2002 aaPredicted RBP5.1□□□□□ -1.59
BRCA1-221ENST00000493795 ADAMTS20P59510 1910 aa5.1□□□□□ -1.59
BRCA1-221ENST00000493795 MUC6Q6W4X9 2439 aa5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 82.8 ms