RNA–Protein interactions for RNA: ENST00000493522.6

CTSA-209, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 901 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-209ENST00000493522 HIST1H2BLQ99880 126 aa7.27□□□□□ -1.25
CTSA-209ENST00000493522 NDUFA12Q9UI09 145 aa7.27□□□□□ -1.25
CTSA-209ENST00000493522 LGALS3P17931 250 aaKnown RBP7.26□□□□□ -1.25
CTSA-209ENST00000493522 SNRPEP62304 92 aaKnown RBP7.26□□□□□ -1.25
CTSA-209ENST00000493522 MEIG1Q5JSS6 88 aa7.26□□□□□ -1.25
CTSA-209ENST00000493522 MYMXA0A1B0GTQ4 84 aa7.25□□□□□ -1.25
CTSA-209ENST00000493522 J3QQQ9 107 aa7.25□□□□□ -1.25
CTSA-209ENST00000493522 M0QXV9 152 aa7.25□□□□□ -1.25
CTSA-209ENST00000493522 KRTAP10-4P60372 401 aaPredicted RBP7.25□□□□□ -1.25
CTSA-209ENST00000493522 PHF5AQ7RTV0 110 aaKnown RBP7.25□□□□□ -1.25
CTSA-209ENST00000493522 A0A0U1RRA0 63 aa7.24□□□□□ -1.25
CTSA-209ENST00000493522 E9PLD3 99 aa7.24□□□□□ -1.25
CTSA-209ENST00000493522 LINC00158P58513 81 aa7.24□□□□□ -1.25
CTSA-209ENST00000493522 HERV-K104P63124 156 aa7.24□□□□□ -1.25
CTSA-209ENST00000493522 COX17Q14061 63 aa7.24□□□□□ -1.25
CTSA-209ENST00000493522 NMUP48645 174 aa7.23□□□□□ -1.25
CTSA-209ENST00000493522 ATOH7Q8N100 152 aa7.23□□□□□ -1.25
CTSA-209ENST00000493522 C5orf52A6NGY3 159 aa7.22□□□□□ -1.25
CTSA-209ENST00000493522 SMIM13P0DJ93 91 aa7.22□□□□□ -1.25
CTSA-209ENST00000493522 AKR1D1P51857 326 aa7.22□□□□□ -1.25
CTSA-209ENST00000493522 PRR3P79522 188 aaKnown RBP7.22□□□□□ -1.25
CTSA-209ENST00000493522 KRTAP7-1Q8IUC3 87 aa7.22□□□□□ -1.25
CTSA-209ENST00000493522 SND1-IT1Q9HBX3 110 aa7.22□□□□□ -1.25
CTSA-209ENST00000493522 UBE2BP63146 152 aa7.21□□□□□ -1.26
CTSA-209ENST00000493522 LINC00587B1AMM8 73 aa7.2□□□□□ -1.26
CTSA-209ENST00000493522 NKAPP1Q8N9T2 125 aa7.2□□□□□ -1.26
CTSA-209ENST00000493522 TMA7Q9Y2S6 64 aaKnown RBP7.2□□□□□ -1.26
CTSA-209ENST00000493522 RNF213Q63HN8 5207 aa7.19□□□□□ -1.26
CTSA-209ENST00000493522 IGKV2D-26A0A0A0MRZ7 120 aa7.19□□□□□ -1.26
CTSA-209ENST00000493522 ANKRD39Q53RE8 183 aa7.19□□□□□ -1.26
CTSA-209ENST00000493522 MIR7-3HGQ8N6C7 128 aa7.19□□□□□ -1.26
CTSA-209ENST00000493522 C22orf24Q9Y442 160 aa7.19□□□□□ -1.26
CTSA-209ENST00000493522 ZNF815PA8K554 130 aa7.18□□□□□ -1.26
CTSA-209ENST00000493522 LBHQ53QV2 105 aaPredicted RBP7.18□□□□□ -1.26
CTSA-209ENST00000493522 MRPL55Q7Z7F7 128 aaKnown RBP7.18□□□□□ -1.26
CTSA-209ENST00000493522 TP73-AS1Q9UF72 201 aa7.18□□□□□ -1.26
CTSA-209ENST00000493522 TNXBP22105 4242 aa7.17□□□□□ -1.26
CTSA-209ENST00000493522 IGLV5-37A0A075B6J1 123 aa7.17□□□□□ -1.26
CTSA-209ENST00000493522 A0A0J9YXY3 114 aa7.17□□□□□ -1.26
CTSA-209ENST00000493522 GAGE10A6NGK3 116 aa7.17□□□□□ -1.26
CTSA-209ENST00000493522 SCGB1D1O95968 90 aa7.17□□□□□ -1.26
CTSA-209ENST00000493522 HNRNPA3P51991 378 aaKnown RBP7.17□□□□□ -1.26
CTSA-209ENST00000493522 RPL24P83731 157 aaKnown RBP7.17□□□□□ -1.26
CTSA-209ENST00000493522 DAND5Q8N907 189 aa7.17□□□□□ -1.26
CTSA-209ENST00000493522 TTTY13Q9BZ97 58 aa7.17□□□□□ -1.26
CTSA-209ENST00000493522 PSORS1C2Q9UIG4 136 aa7.17□□□□□ -1.26
CTSA-209ENST00000493522 LRP2P98164 4655 aa7.17□□□□□ -1.26
CTSA-209ENST00000493522 HSBP1L1C9JCN9 74 aa7.16□□□□□ -1.26
CTSA-209ENST00000493522 VPREB1P12018 145 aa7.16□□□□□ -1.26
CTSA-209ENST00000493522 C1orf137Q5JT78 98 aa7.16□□□□□ -1.26
CTSA-209ENST00000493522 KRTAP11-1Q8IUC1 163 aa7.16□□□□□ -1.26
CTSA-209ENST00000493522 BOD1L2Q8IYS8 172 aa7.15□□□□□ -1.26
CTSA-209ENST00000493522 MIEN1Q9BRT3 115 aa7.15□□□□□ -1.26
CTSA-209ENST00000493522 RPL37AP8A6NKH3 93 aa7.14□□□□□ -1.27
CTSA-209ENST00000493522 NPC2P61916 151 aa7.14□□□□□ -1.27
CTSA-209ENST00000493522 Q8NDZ9 215 aa7.14□□□□□ -1.27
CTSA-209ENST00000493522 LINC00167Q96N53 147 aa7.14□□□□□ -1.27
CTSA-209ENST00000493522 NCR3O14931 201 aa7.13□□□□□ -1.27
CTSA-209ENST00000493522 SCGB1D4Q6XE38 83 aa7.13□□□□□ -1.27
CTSA-209ENST00000493522 IGKV2-28A0A075B6P5 120 aa7.12□□□□□ -1.27
CTSA-209ENST00000493522 TIMM17BO60830 172 aa7.12□□□□□ -1.27
CTSA-209ENST00000493522 IGKV2D-28P01615 120 aa7.12□□□□□ -1.27
CTSA-209ENST00000493522 ADAMTSL4-AS1Q5T5F5 129 aa7.12□□□□□ -1.27
CTSA-209ENST00000493522 PCP2Q8IVA1 136 aa7.12□□□□□ -1.27
CTSA-209ENST00000493522 IGLV7-43P04211 117 aa7.11□□□□□ -1.27
CTSA-209ENST00000493522 MT1HL1P0DM35 61 aa7.11□□□□□ -1.27
CTSA-209ENST00000493522 TMEM238C9JI98 176 aa7.1□□□□□ -1.27
CTSA-209ENST00000493522 M0R378 163 aa7.1□□□□□ -1.27
CTSA-209ENST00000493522 LITAFQ99732 161 aa7.1□□□□□ -1.27
CTSA-209ENST00000493522 SPINK6Q6UWN8 80 aa7.09□□□□□ -1.27
CTSA-209ENST00000493522 SOSTDC1Q6X4U4 206 aa7.09□□□□□ -1.27
CTSA-209ENST00000493522 IGLV1-50A0A075B6I6 118 aa7.08□□□□□ -1.28
CTSA-209ENST00000493522 LOC107984156A0A0G2JMH3 177 aa7.08□□□□□ -1.28
CTSA-209ENST00000493522 ARL17AQ8IVW1 177 aa7.08□□□□□ -1.28
CTSA-209ENST00000493522 LINC00308Q8TCZ7 52 aa7.08□□□□□ -1.28
CTSA-209ENST00000493522 SPANXB1Q9NS25 103 aaPredicted RBP7.08□□□□□ -1.28
CTSA-209ENST00000493522 EIF4EBP3O60516 100 aaPredicted RBP7.07□□□□□ -1.28
CTSA-209ENST00000493522 BCE1O60756 84 aa7.07□□□□□ -1.28
CTSA-209ENST00000493522 JOSD1Q15040 202 aaPredicted RBP7.07□□□□□ -1.28
CTSA-209ENST00000493522 VAMP8Q9BV40 100 aa7.07□□□□□ -1.28
CTSA-209ENST00000493522 TRBV10-3A0A0K0K1G6 114 aa7.06□□□□□ -1.28
CTSA-209ENST00000493522 NDUFC2O95298 119 aa7.06□□□□□ -1.28
CTSA-209ENST00000493522 SRSF9Q13242 221 aaKnown RBP eCLIP7.06□□□□□ -1.28
CTSA-209ENST00000493522 REG3GQ6UW15 175 aa7.06□□□□□ -1.28
CTSA-209ENST00000493522 DIRC1Q969H9 104 aa7.06□□□□□ -1.28
CTSA-209ENST00000493522 SPANXDQ9BXN6 97 aa7.06□□□□□ -1.28
CTSA-209ENST00000493522 TMEM126AQ9H061 195 aa7.06□□□□□ -1.28
CTSA-209ENST00000493522 SPANXCQ9NY87 97 aa7.06□□□□□ -1.28
CTSA-209ENST00000493522 PAM16Q9Y3D7 125 aa7.06□□□□□ -1.28
CTSA-209ENST00000493522 TRBV10-2A0A0K0K1G8 114 aa7.05□□□□□ -1.28
CTSA-209ENST00000493522 PRYO14603 147 aa7.05□□□□□ -1.28
CTSA-209ENST00000493522 RPL28P46779 137 aaKnown RBP7.05□□□□□ -1.28
CTSA-209ENST00000493522 UBE2AP49459 152 aa7.05□□□□□ -1.28
CTSA-209ENST00000493522 SPATA45Q537H7 98 aa7.05□□□□□ -1.28
CTSA-209ENST00000493522 H0Y9J4 135 aa7.04□□□□□ -1.28
CTSA-209ENST00000493522 ZNF861PO60384 105 aa7.04□□□□□ -1.28
CTSA-209ENST00000493522 DDTP30046 118 aa7.04□□□□□ -1.28
CTSA-209ENST00000493522 S100A12P80511 92 aa7.04□□□□□ -1.28
CTSA-209ENST00000493522 S100A7L2Q5SY68 101 aa7.04□□□□□ -1.28
CTSA-209ENST00000493522 FAM19A1Q7Z5A9 133 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms