RNA–Protein interactions for RNA: ENST00000493348.1

TM4SF1-204, Transcript of transmembrane 4 L six family member 1, humanhuman

TSL 2

Gene TM4SF1, Length 976 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1-204ENST00000493348 J3QQQ9 107 aa5.14□□□□□ -1.59
TM4SF1-204ENST00000493348 M0QXV9 152 aa5.14□□□□□ -1.59
TM4SF1-204ENST00000493348 INAFM2P0DMQ5 153 aa5.14□□□□□ -1.59
TM4SF1-204ENST00000493348 LBHQ53QV2 105 aaPredicted RBP5.14□□□□□ -1.59
TM4SF1-204ENST00000493348 LINC01545Q5VT33 79 aa5.14□□□□□ -1.59
TM4SF1-204ENST00000493348 XAGE1AQ9HD64 81 aa5.14□□□□□ -1.59
TM4SF1-204ENST00000493348 A0A0U1RRA0 63 aa5.13□□□□□ -1.59
TM4SF1-204ENST00000493348 HSBP1L1C9JCN9 74 aa5.13□□□□□ -1.59
TM4SF1-204ENST00000493348 SNRPEP62304 92 aaKnown RBP5.13□□□□□ -1.59
TM4SF1-204ENST00000493348 RPL24P83731 157 aaKnown RBP5.13□□□□□ -1.59
TM4SF1-204ENST00000493348 HIST3H2BBQ8N257 126 aa5.13□□□□□ -1.59
TM4SF1-204ENST00000493348 A0A1W2PNN7 141 aa5.12□□□□□ -1.59
TM4SF1-204ENST00000493348 E9PLD3 99 aa5.12□□□□□ -1.59
TM4SF1-204ENST00000493348 C9orf129Q5T035 196 aaKnown RBP5.12□□□□□ -1.59
TM4SF1-204ENST00000493348 MIEN1Q9BRT3 115 aa5.12□□□□□ -1.59
TM4SF1-204ENST00000493348 FAT1Q14517 4588 aa5.11□□□□□ -1.59
TM4SF1-204ENST00000493348 FAM168BA1KXE4 195 aa5.11□□□□□ -1.59
TM4SF1-204ENST00000493348 SCGB1D1O95968 90 aa5.11□□□□□ -1.59
TM4SF1-204ENST00000493348 SMIM13P0DJ93 91 aa5.11□□□□□ -1.59
TM4SF1-204ENST00000493348 PHF5AQ7RTV0 110 aaKnown RBP5.11□□□□□ -1.59
TM4SF1-204ENST00000493348 HIST1H2BLQ99880 126 aa5.11□□□□□ -1.59
TM4SF1-204ENST00000493348 VPS13BQ7Z7G8 4022 aa5.11□□□□□ -1.59
TM4SF1-204ENST00000493348 SRRM2Q9UQ35 2752 aaKnown RBP5.1□□□□□ -1.59
TM4SF1-204ENST00000493348 S100A12P80511 92 aa5.1□□□□□ -1.59
TM4SF1-204ENST00000493348 SND1-IT1Q9HBX3 110 aa5.1□□□□□ -1.59
TM4SF1-204ENST00000493348 C22orf24Q9Y442 160 aa5.1□□□□□ -1.59
TM4SF1-204ENST00000493348 ZNF815PA8K554 130 aa5.09□□□□□ -1.59
TM4SF1-204ENST00000493348 EIF4EBP3O60516 100 aaPredicted RBP5.09□□□□□ -1.59
TM4SF1-204ENST00000493348 C1orf137Q5JT78 98 aa5.09□□□□□ -1.59
TM4SF1-204ENST00000493348 SCGB1D4Q6XE38 83 aa5.09□□□□□ -1.59
TM4SF1-204ENST00000493348 MRPL55Q7Z7F7 128 aaKnown RBP5.09□□□□□ -1.59
TM4SF1-204ENST00000493348 ATOH7Q8N100 152 aa5.09□□□□□ -1.59
TM4SF1-204ENST00000493348 MIR7-3HGQ8N6C7 128 aa5.09□□□□□ -1.59
TM4SF1-204ENST00000493348 TP73-AS1Q9UF72 201 aa5.09□□□□□ -1.59
TM4SF1-204ENST00000493348 PLA2G2DQ9UNK4 145 aa5.09□□□□□ -1.59
TM4SF1-204ENST00000493348 C5orf52A6NGY3 159 aa5.08□□□□□ -1.6
TM4SF1-204ENST00000493348 TSPEAR-AS2P59090 65 aa5.08□□□□□ -1.6
TM4SF1-204ENST00000493348 PRR3P79522 188 aaKnown RBP5.08□□□□□ -1.6
TM4SF1-204ENST00000493348 SERTAD4-AS1Q5TG53 156 aa5.08□□□□□ -1.6
TM4SF1-204ENST00000493348 BOD1L2Q8IYS8 172 aa5.08□□□□□ -1.6
TM4SF1-204ENST00000493348 GAGE10A6NGK3 116 aa5.07□□□□□ -1.6
TM4SF1-204ENST00000493348 COPS9Q8WXC6 57 aa5.07□□□□□ -1.6
TM4SF1-204ENST00000493348 KRTAP4-5Q9BYR2 181 aa5.07□□□□□ -1.6
TM4SF1-204ENST00000493348 PSORS1C2Q9UIG4 136 aa5.07□□□□□ -1.6
TM4SF1-204ENST00000493348 TMA7Q9Y2S6 64 aaKnown RBP5.07□□□□□ -1.6
TM4SF1-204ENST00000493348 A0A0J9YXY3 114 aa5.06□□□□□ -1.6
TM4SF1-204ENST00000493348 TMEM238C9JI98 176 aa5.06□□□□□ -1.6
TM4SF1-204ENST00000493348 LINC00167Q96N53 147 aa5.06□□□□□ -1.6
TM4SF1-204ENST00000493348 KRTAP4-7Q9BYR0 210 aa5.06□□□□□ -1.6
TM4SF1-204ENST00000493348 IGLV5-37A0A075B6J1 123 aa5.05□□□□□ -1.6
TM4SF1-204ENST00000493348 IGKV2-28A0A075B6P5 120 aa5.05□□□□□ -1.6
TM4SF1-204ENST00000493348 RPL37AP8A6NKH3 93 aa5.05□□□□□ -1.6
TM4SF1-204ENST00000493348 M0R378 163 aa5.05□□□□□ -1.6
TM4SF1-204ENST00000493348 IGKV2D-28P01615 120 aa5.05□□□□□ -1.6
TM4SF1-204ENST00000493348 NPC2P61916 151 aa5.05□□□□□ -1.6
TM4SF1-204ENST00000493348 REG3GQ6UW15 175 aa5.05□□□□□ -1.6
TM4SF1-204ENST00000493348 SPINK6Q6UWN8 80 aa5.05□□□□□ -1.6
TM4SF1-204ENST00000493348 DAND5Q8N907 189 aa5.05□□□□□ -1.6
TM4SF1-204ENST00000493348 IGKV2D-26A0A0A0MRZ7 120 aa5.04□□□□□ -1.6
TM4SF1-204ENST00000493348 TIMM17BO60830 172 aa5.04□□□□□ -1.6
TM4SF1-204ENST00000493348 VPREB1P12018 145 aa5.04□□□□□ -1.6
TM4SF1-204ENST00000493348 UBE2AP49459 152 aa5.04□□□□□ -1.6
TM4SF1-204ENST00000493348 ANKRD39Q53RE8 183 aa5.04□□□□□ -1.6
TM4SF1-204ENST00000493348 S100A7L2Q5SY68 101 aa5.04□□□□□ -1.6
TM4SF1-204ENST00000493348 LCE1DQ5T752 114 aa5.04□□□□□ -1.6
TM4SF1-204ENST00000493348 CBY1Q9Y3M2 126 aa5.04□□□□□ -1.6
TM4SF1-204ENST00000493348 FLG2Q5D862 2391 aaPredicted RBP5.03□□□□□ -1.6
TM4SF1-204ENST00000493348 NCR3O14931 201 aa5.03□□□□□ -1.6
TM4SF1-204ENST00000493348 IGLV7-43P04211 117 aa5.03□□□□□ -1.6
TM4SF1-204ENST00000493348 RPL28P46779 137 aaKnown RBP5.03□□□□□ -1.6
TM4SF1-204ENST00000493348 DIRC1Q969H9 104 aa5.03□□□□□ -1.6
TM4SF1-204ENST00000493348 KRTAP17-1Q9BYP8 105 aa5.03□□□□□ -1.6
TM4SF1-204ENST00000493348 ABCA13Q86UQ4 5058 aa5.02□□□□□ -1.61
TM4SF1-204ENST00000493348 BCE1O60756 84 aa5.02□□□□□ -1.61
TM4SF1-204ENST00000493348 HNRNPA3P51991 378 aaKnown RBP5.02□□□□□ -1.61
TM4SF1-204ENST00000493348 SRSF9Q13242 221 aaKnown RBP eCLIP5.02□□□□□ -1.61
TM4SF1-204ENST00000493348 Q6ZVH6 145 aa5.02□□□□□ -1.61
TM4SF1-204ENST00000493348 KRTAP7-1Q8IUC3 87 aa5.02□□□□□ -1.61
TM4SF1-204ENST00000493348 VAMP8Q9BV40 100 aa5.02□□□□□ -1.61
TM4SF1-204ENST00000493348 SPANXB1Q9NS25 103 aaPredicted RBP5.02□□□□□ -1.61
TM4SF1-204ENST00000493348 IGLV1-50A0A075B6I6 118 aa5.01□□□□□ -1.61
TM4SF1-204ENST00000493348 TRBV10-2A0A0K0K1G8 114 aa5.01□□□□□ -1.61
TM4SF1-204ENST00000493348 NDUFC2O95298 119 aa5.01□□□□□ -1.61
TM4SF1-204ENST00000493348 OXTP01178 125 aa5.01□□□□□ -1.61
TM4SF1-204ENST00000493348 DDTP30046 118 aa5.01□□□□□ -1.61
TM4SF1-204ENST00000493348 KRTAP10-4P60372 401 aaPredicted RBP5.01□□□□□ -1.61
TM4SF1-204ENST00000493348 FAM19A1Q7Z5A9 133 aa5.01□□□□□ -1.61
TM4SF1-204ENST00000493348 PCP2Q8IVA1 136 aa5.01□□□□□ -1.61
TM4SF1-204ENST00000493348 OR13C6PQ8NH95 151 aa5.01□□□□□ -1.61
TM4SF1-204ENST00000493348 TTTY13Q9BZ97 58 aa5.01□□□□□ -1.61
TM4SF1-204ENST00000493348 SPANXCQ9NY87 97 aa5.01□□□□□ -1.61
TM4SF1-204ENST00000493348 PKHD1L1Q86WI1 4243 aa5.01□□□□□ -1.61
TM4SF1-204ENST00000493348 LOC107984156A0A0G2JMH3 177 aa5□□□□□ -1.61
TM4SF1-204ENST00000493348 ETDCA0A1B0GVM5 59 aa5□□□□□ -1.61
TM4SF1-204ENST00000493348 PRYO14603 147 aa5□□□□□ -1.61
TM4SF1-204ENST00000493348 ZNF861PO60384 105 aa5□□□□□ -1.61
TM4SF1-204ENST00000493348 IFITM1P13164 125 aa5□□□□□ -1.61
TM4SF1-204ENST00000493348 HINT1P49773 126 aaPredicted RBP5□□□□□ -1.61
TM4SF1-204ENST00000493348 ADAMTSL4-AS1Q5T5F5 129 aa5□□□□□ -1.61
TM4SF1-204ENST00000493348 ARL17AQ8IVW1 177 aa5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms