RNA–Protein interactions for RNA: ENST00000493177.1

MSH6-208, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 813 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-208ENST00000493177 TIMM17BO60830 172 aa8.58□□□□□ -1.04
MSH6-208ENST00000493177 PLA2G1BP04054 148 aaKnown RBP8.58□□□□□ -1.04
MSH6-208ENST00000493177 PTTG1IPP53801 180 aa8.58□□□□□ -1.04
MSH6-208ENST00000493177 UQCR10Q9UDW1 63 aa8.58□□□□□ -1.04
MSH6-208ENST00000493177 CHTF8P0CG12 524 aa8.57□□□□□ -1.04
MSH6-208ENST00000493177 NPC2P61916 151 aa8.57□□□□□ -1.04
MSH6-208ENST00000493177 Q6ZSA8 131 aa8.57□□□□□ -1.04
MSH6-208ENST00000493177 SCXQ7RTU7 201 aa8.57□□□□□ -1.04
MSH6-208ENST00000493177 LINC00528Q8N1L1 170 aa8.57□□□□□ -1.04
MSH6-208ENST00000493177 DPH3Q96FX2 82 aa8.57□□□□□ -1.04
MSH6-208ENST00000493177 XAGE1AQ9HD64 81 aa8.57□□□□□ -1.04
MSH6-208ENST00000493177 ADAMTSL4-AS1Q5T5F5 129 aa8.56□□□□□ -1.04
MSH6-208ENST00000493177 SND1-IT1Q9HBX3 110 aa8.56□□□□□ -1.04
MSH6-208ENST00000493177 SRSF9Q13242 221 aaKnown RBP eCLIP8.55□□□□□ -1.04
MSH6-208ENST00000493177 LITAFQ99732 161 aa8.55□□□□□ -1.04
MSH6-208ENST00000493177 MIEN1Q9BRT3 115 aa8.55□□□□□ -1.04
MSH6-208ENST00000493177 LINC00474Q9P2X8 69 aa8.55□□□□□ -1.04
MSH6-208ENST00000493177 TSTD3H0UI37 97 aa8.54□□□□□ -1.04
MSH6-208ENST00000493177 SPANXDQ9BXN6 97 aa8.54□□□□□ -1.04
MSH6-208ENST00000493177 SPANXCQ9NY87 97 aa8.54□□□□□ -1.04
MSH6-208ENST00000493177 HNRNPA3P51991 378 aaKnown RBP8.53□□□□□ -1.04
MSH6-208ENST00000493177 C9orf129Q5T035 196 aaKnown RBP8.53□□□□□ -1.04
MSH6-208ENST00000493177 C2orf91Q6ZV80 131 aa8.53□□□□□ -1.04
MSH6-208ENST00000493177 HIST1H4GQ99525 98 aa8.53□□□□□ -1.04
MSH6-208ENST00000493177 HIGD1BQ9P298 99 aa8.53□□□□□ -1.04
MSH6-208ENST00000493177 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.53□□□□□ -1.04
MSH6-208ENST00000493177 DNAH8Q96JB1 4490 aa8.52□□□□□ -1.05
MSH6-208ENST00000493177 PANO1I0J062 215 aa8.52□□□□□ -1.05
MSH6-208ENST00000493177 Q6ZVH6 145 aa8.52□□□□□ -1.05
MSH6-208ENST00000493177 CIRBP-AS1Q8TBR5 109 aa8.52□□□□□ -1.05
MSH6-208ENST00000493177 LINC00308Q8TCZ7 52 aa8.52□□□□□ -1.05
MSH6-208ENST00000493177 SPACA4Q8TDM5 124 aa8.52□□□□□ -1.05
MSH6-208ENST00000493177 SPANXB1Q9NS25 103 aaPredicted RBP8.52□□□□□ -1.05
MSH6-208ENST00000493177 FAM19A5Q7Z5A7 132 aaPredicted RBP8.51□□□□□ -1.05
MSH6-208ENST00000493177 MUSTN1Q8IVN3 82 aa8.51□□□□□ -1.05
MSH6-208ENST00000493177 COPS9Q8WXC6 57 aa8.51□□□□□ -1.05
MSH6-208ENST00000493177 FAM168BA1KXE4 195 aa8.5□□□□□ -1.05
MSH6-208ENST00000493177 IFITM1P13164 125 aa8.5□□□□□ -1.05
MSH6-208ENST00000493177 SOSTDC1Q6X4U4 206 aa8.5□□□□□ -1.05
MSH6-208ENST00000493177 A0A1W2PNN7 141 aa8.49□□□□□ -1.05
MSH6-208ENST00000493177 RPL24P83731 157 aaKnown RBP8.49□□□□□ -1.05
MSH6-208ENST00000493177 A0A087WYN8 130 aa8.48□□□□□ -1.05
MSH6-208ENST00000493177 SERTAD4-AS1Q5TG53 156 aa8.48□□□□□ -1.05
MSH6-208ENST00000493177 NKAPP1Q8N9T2 125 aa8.48□□□□□ -1.05
MSH6-208ENST00000493177 EIF4EBP3O60516 100 aaPredicted RBP8.47□□□□□ -1.05
MSH6-208ENST00000493177 PLA2G2DQ9UNK4 145 aa8.47□□□□□ -1.05
MSH6-208ENST00000493177 LOC107984156A0A0G2JMH3 177 aa8.46□□□□□ -1.06
MSH6-208ENST00000493177 J3QL48 77 aa8.46□□□□□ -1.06
MSH6-208ENST00000493177 NCR3O14931 201 aa8.46□□□□□ -1.06
MSH6-208ENST00000493177 VPREB1P12018 145 aa8.46□□□□□ -1.06
MSH6-208ENST00000493177 RPL37AP61513 92 aaKnown RBP8.46□□□□□ -1.06
MSH6-208ENST00000493177 HSD52Q0P140 79 aa8.46□□□□□ -1.06
MSH6-208ENST00000493177 TAL2Q16559 108 aa8.46□□□□□ -1.06
MSH6-208ENST00000493177 ARL17AQ8IVW1 177 aa8.46□□□□□ -1.06
MSH6-208ENST00000493177 M0QXV9 152 aa8.45□□□□□ -1.06
MSH6-208ENST00000493177 PRR3P79522 188 aaKnown RBP8.45□□□□□ -1.06
MSH6-208ENST00000493177 CEND1Q8N111 149 aa8.45□□□□□ -1.06
MSH6-208ENST00000493177 Q8NDZ9 215 aa8.45□□□□□ -1.06
MSH6-208ENST00000493177 PLAC8Q9NZF1 115 aa8.45□□□□□ -1.06
MSH6-208ENST00000493177 C22orf24Q9Y442 160 aa8.45□□□□□ -1.06
MSH6-208ENST00000493177 CTAG1AP78358 180 aa8.44□□□□□ -1.06
MSH6-208ENST00000493177 VPS13BQ7Z7G8 4022 aa8.44□□□□□ -1.06
MSH6-208ENST00000493177 A4D1N5 150 aa8.43□□□□□ -1.06
MSH6-208ENST00000493177 GAGE10A6NGK3 116 aa8.43□□□□□ -1.06
MSH6-208ENST00000493177 NDUFC2O95298 119 aa8.43□□□□□ -1.06
MSH6-208ENST00000493177 PHF5AQ7RTV0 110 aaKnown RBP8.43□□□□□ -1.06
MSH6-208ENST00000493177 KRTAP7-1Q8IUC3 87 aa8.43□□□□□ -1.06
MSH6-208ENST00000493177 PPDPFQ9H3Y8 114 aa8.43□□□□□ -1.06
MSH6-208ENST00000493177 IGLV5-37A0A075B6J1 123 aa8.42□□□□□ -1.06
MSH6-208ENST00000493177 M0R378 163 aa8.42□□□□□ -1.06
MSH6-208ENST00000493177 DDTP30046 118 aa8.42□□□□□ -1.06
MSH6-208ENST00000493177 LBHQ53QV2 105 aaPredicted RBP8.42□□□□□ -1.06
MSH6-208ENST00000493177 MRPL55Q7Z7F7 128 aaKnown RBP8.42□□□□□ -1.06
MSH6-208ENST00000493177 FAT1Q14517 4588 aa8.42□□□□□ -1.06
MSH6-208ENST00000493177 TMEM238LA0A1B0GVL6 79 aa8.41□□□□□ -1.06
MSH6-208ENST00000493177 A6NJY4 79 aa8.41□□□□□ -1.06
MSH6-208ENST00000493177 UBE2BP63146 152 aa8.41□□□□□ -1.06
MSH6-208ENST00000493177 OR13C6PQ8NH95 151 aa8.41□□□□□ -1.06
MSH6-208ENST00000493177 C7orf33Q8WU49 177 aa8.41□□□□□ -1.06
MSH6-208ENST00000493177 TRBV10-2A0A0K0K1G8 114 aa8.4□□□□□ -1.06
MSH6-208ENST00000493177 PCP4L1A6NKN8 68 aa8.4□□□□□ -1.06
MSH6-208ENST00000493177 HINT1P49773 126 aaPredicted RBP8.4□□□□□ -1.06
MSH6-208ENST00000493177 FXYD2P54710 66 aa8.4□□□□□ -1.06
MSH6-208ENST00000493177 S100A7L2Q5SY68 101 aa8.4□□□□□ -1.06
MSH6-208ENST00000493177 LINC00167Q96N53 147 aa8.4□□□□□ -1.06
MSH6-208ENST00000493177 IGKV2-28A0A075B6P5 120 aa8.39□□□□□ -1.07
MSH6-208ENST00000493177 A6NDN8 102 aa8.39□□□□□ -1.07
MSH6-208ENST00000493177 RPL37AP8A6NKH3 93 aa8.39□□□□□ -1.07
MSH6-208ENST00000493177 IGKV2D-28P01615 120 aa8.39□□□□□ -1.07
MSH6-208ENST00000493177 M0R143 59 aa8.38□□□□□ -1.07
MSH6-208ENST00000493177 RAB37Q96AX2 223 aa8.38□□□□□ -1.07
MSH6-208ENST00000493177 TRAV13-2A0A0B4J235 113 aa8.37□□□□□ -1.07
MSH6-208ENST00000493177 TRBV10-3A0A0K0K1G6 114 aa8.37□□□□□ -1.07
MSH6-208ENST00000493177 BVES-AS1Q5T3Y7 98 aa8.37□□□□□ -1.07
MSH6-208ENST00000493177 NHP2Q9NX24 153 aaKnown RBP8.37□□□□□ -1.07
MSH6-208ENST00000493177 BATFQ16520 125 aa8.36□□□□□ -1.07
MSH6-208ENST00000493177 LINC00337Q8N6G1 96 aa8.36□□□□□ -1.07
MSH6-208ENST00000493177 FLG2Q5D862 2391 aaPredicted RBP8.35□□□□□ -1.07
MSH6-208ENST00000493177 CFC1BP0CG36 223 aa8.35□□□□□ -1.07
MSH6-208ENST00000493177 CFC1P0CG37 223 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms