RNA–Protein interactions for RNA: ENST00000492512.1

GPNMB-213, Transcript of glycoprotein nmb, humanhuman

TSL 3

Gene GPNMB, Length 447 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-213ENST00000492512 CDKN2A-AS1Q9UH64 79 aa7.83□□□□□ -1.16
GPNMB-213ENST00000492512 IGLV5-37A0A075B6J1 123 aa7.82□□□□□ -1.16
GPNMB-213ENST00000492512 LOC389332A0A1B0GUA5 103 aa7.82□□□□□ -1.16
GPNMB-213ENST00000492512 HSBP1O75506 76 aa7.82□□□□□ -1.16
GPNMB-213ENST00000492512 HERVK_113P63121 156 aa7.82□□□□□ -1.16
GPNMB-213ENST00000492512 FP248Q71RG6 208 aaPredicted RBP7.82□□□□□ -1.16
GPNMB-213ENST00000492512 FAM19A3Q7Z5A8 133 aa7.82□□□□□ -1.16
GPNMB-213ENST00000492512 FSIP2Q5CZC0 6907 aa7.82□□□□□ -1.16
GPNMB-213ENST00000492512 IGKV2-28A0A075B6P5 120 aa7.81□□□□□ -1.16
GPNMB-213ENST00000492512 IGKV2D-28P01615 120 aa7.81□□□□□ -1.16
GPNMB-213ENST00000492512 SEC11AP67812 179 aa7.81□□□□□ -1.16
GPNMB-213ENST00000492512 PRLHP81277 87 aa7.81□□□□□ -1.16
GPNMB-213ENST00000492512 GEMIN7Q9H840 131 aaKnown RBP7.81□□□□□ -1.16
GPNMB-213ENST00000492512 LAMTOR2Q9Y2Q5 125 aa7.81□□□□□ -1.16
GPNMB-213ENST00000492512 NPSP0C0P6 89 aa7.8□□□□□ -1.16
GPNMB-213ENST00000492512 SPAG11AQ6PDA7 123 aa7.8□□□□□ -1.16
GPNMB-213ENST00000492512 C3orf22Q8N5N4 141 aa7.8□□□□□ -1.16
GPNMB-213ENST00000492512 SCGB1D1O95968 90 aa7.79□□□□□ -1.16
GPNMB-213ENST00000492512 KRTAP13-3Q3SY46 172 aa7.79□□□□□ -1.16
GPNMB-213ENST00000492512 FAM19A1Q7Z5A9 133 aa7.79□□□□□ -1.16
GPNMB-213ENST00000492512 KRTAP4-1Q9BYQ7 146 aa7.79□□□□□ -1.16
GPNMB-213ENST00000492512 MAP1LC3AQ9H492 121 aa7.79□□□□□ -1.16
GPNMB-213ENST00000492512 PCP4L1A6NKN8 68 aa7.78□□□□□ -1.16
GPNMB-213ENST00000492512 PRSS47A8MTI9 375 aa7.78□□□□□ -1.16
GPNMB-213ENST00000492512 LINC00614P0C842 121 aa7.78□□□□□ -1.16
GPNMB-213ENST00000492512 IGIPA6NJ69 53 aa7.77□□□□□ -1.17
GPNMB-213ENST00000492512 SEC61BP60468 96 aaKnown RBP7.77□□□□□ -1.17
GPNMB-213ENST00000492512 ORMDL2Q53FV1 153 aa7.77□□□□□ -1.17
GPNMB-213ENST00000492512 C4orf48Q5BLP8 95 aa7.77□□□□□ -1.17
GPNMB-213ENST00000492512 PAPPA-AS1Q5QFB9 102 aa7.77□□□□□ -1.17
GPNMB-213ENST00000492512 FA2HQ7L5A8 372 aa7.77□□□□□ -1.17
GPNMB-213ENST00000492512 Q8N8P6 123 aa7.77□□□□□ -1.17
GPNMB-213ENST00000492512 COX7B2Q8TF08 81 aa7.77□□□□□ -1.17
GPNMB-213ENST00000492512 PLEKHB2Q96CS7 222 aa7.77□□□□□ -1.17
GPNMB-213ENST00000492512 TSTD3H0UI37 97 aa7.76□□□□□ -1.17
GPNMB-213ENST00000492512 URB1-AS1Q96HZ7 61 aa7.76□□□□□ -1.17
GPNMB-213ENST00000492512 TMEM126AQ9H061 195 aa7.76□□□□□ -1.17
GPNMB-213ENST00000492512 SMIM1B2RUZ4 78 aa7.75□□□□□ -1.17
GPNMB-213ENST00000492512 TMEM238C9JI98 176 aa7.75□□□□□ -1.17
GPNMB-213ENST00000492512 KRTDAPP60985 99 aa7.75□□□□□ -1.17
GPNMB-213ENST00000492512 FAM19A2Q8N3H0 131 aa7.75□□□□□ -1.17
GPNMB-213ENST00000492512 HSPB8Q9UJY1 196 aa7.75□□□□□ -1.17
GPNMB-213ENST00000492512 NXT2Q9NPJ8 142 aaKnown RBP7.74□□□□□ -1.17
GPNMB-213ENST00000492512 LINC01546A6NGU7 62 aa7.73□□□□□ -1.17
GPNMB-213ENST00000492512 K7EMI3 77 aa7.73□□□□□ -1.17
GPNMB-213ENST00000492512 LEPROTL1O95214 131 aa7.73□□□□□ -1.17
GPNMB-213ENST00000492512 C3orf79P0CE67 100 aa7.73□□□□□ -1.17
GPNMB-213ENST00000492512 PMCHL1Q16048 86 aa7.73□□□□□ -1.17
GPNMB-213ENST00000492512 C20orf202A1L168 122 aa7.72□□□□□ -1.17
GPNMB-213ENST00000492512 TIMM17AQ99595 171 aa7.72□□□□□ -1.17
GPNMB-213ENST00000492512 HIGD2AQ9BW72 106 aa7.72□□□□□ -1.17
GPNMB-213ENST00000492512 M0R378 163 aa7.71□□□□□ -1.18
GPNMB-213ENST00000492512 G0S2P27469 103 aa7.71□□□□□ -1.18
GPNMB-213ENST00000492512 PET117Q6UWS5 81 aa7.71□□□□□ -1.18
GPNMB-213ENST00000492512 VAMP8Q9BV40 100 aa7.71□□□□□ -1.18
GPNMB-213ENST00000492512 MAP1LC3CQ9BXW4 147 aa7.71□□□□□ -1.18
GPNMB-213ENST00000492512 KRTAP3-3Q9BYR6 98 aa7.71□□□□□ -1.18
GPNMB-213ENST00000492512 KRTAP3-2Q9BYR7 98 aa7.71□□□□□ -1.18
GPNMB-213ENST00000492512 TINCRA0A1B0GVN0 87 aa7.7□□□□□ -1.18
GPNMB-213ENST00000492512 ATP5LO75964 103 aa7.7□□□□□ -1.18
GPNMB-213ENST00000492512 HBDP02042 147 aa7.7□□□□□ -1.18
GPNMB-213ENST00000492512 SPINK8P0C7L1 97 aa7.7□□□□□ -1.18
GPNMB-213ENST00000492512 VPREB1P12018 145 aa7.7□□□□□ -1.18
GPNMB-213ENST00000492512 PFN2P35080 140 aa7.7□□□□□ -1.18
GPNMB-213ENST00000492512 DAND5Q8N907 189 aa7.7□□□□□ -1.18
GPNMB-213ENST00000492512 SPRR4Q96PI1 79 aa7.7□□□□□ -1.18
GPNMB-213ENST00000492512 SYS1-DBNDD2H3BUS1 97 aa7.69□□□□□ -1.18
GPNMB-213ENST00000492512 RPL24P83731 157 aaKnown RBP7.69□□□□□ -1.18
GPNMB-213ENST00000492512 Q8NBF4 154 aa7.69□□□□□ -1.18
GPNMB-213ENST00000492512 TOMM6Q96B49 74 aa7.69□□□□□ -1.18
GPNMB-213ENST00000492512 IGLV5-45A0A087WSX0 123 aa7.68□□□□□ -1.18
GPNMB-213ENST00000492512 SPINK1P00995 79 aa7.68□□□□□ -1.18
GPNMB-213ENST00000492512 DDTP30046 118 aa7.68□□□□□ -1.18
GPNMB-213ENST00000492512 ERASQ7Z444 233 aa7.68□□□□□ -1.18
GPNMB-213ENST00000492512 PRO1933Q9H354 126 aa7.68□□□□□ -1.18
GPNMB-213ENST00000492512 NDUFA12Q9UI09 145 aa7.68□□□□□ -1.18
GPNMB-213ENST00000492512 LINC00587B1AMM8 73 aa7.67□□□□□ -1.18
GPNMB-213ENST00000492512 SCGB3A1Q96QR1 104 aa7.67□□□□□ -1.18
GPNMB-213ENST00000492512 SND1-IT1Q9HBX3 110 aa7.67□□□□□ -1.18
GPNMB-213ENST00000492512 ZNF706Q9Y5V0 76 aaPredicted RBP7.67□□□□□ -1.18
GPNMB-213ENST00000492512 LCE2CQ5TA81 110 aa7.66□□□□□ -1.18
GPNMB-213ENST00000492512 A0A096LNJ9 63 aa7.65□□□□□ -1.18
GPNMB-213ENST00000492512 LINC01549A6NIU2 74 aa7.65□□□□□ -1.18
GPNMB-213ENST00000492512 LINC01545Q5VT33 79 aa7.65□□□□□ -1.18
GPNMB-213ENST00000492512 H3BRM9 83 aa7.64□□□□□ -1.19
GPNMB-213ENST00000492512 SPATA45Q537H7 98 aa7.64□□□□□ -1.19
GPNMB-213ENST00000492512 MIEN1Q9BRT3 115 aa7.64□□□□□ -1.19
GPNMB-213ENST00000492512 PAM16Q9Y3D7 125 aa7.64□□□□□ -1.19
GPNMB-213ENST00000492512 HSBP1L1C9JCN9 74 aa7.63□□□□□ -1.19
GPNMB-213ENST00000492512 CFC1BP0CG36 223 aa7.63□□□□□ -1.19
GPNMB-213ENST00000492512 IFI27L1Q96BM0 104 aa7.63□□□□□ -1.19
GPNMB-213ENST00000492512 CST9LQ9H4G1 147 aa7.63□□□□□ -1.19
GPNMB-213ENST00000492512 ERG28Q9UKR5 140 aa7.63□□□□□ -1.19
GPNMB-213ENST00000492512 COX17Q14061 63 aa7.62□□□□□ -1.19
GPNMB-213ENST00000492512 XP32Q5T750 250 aa7.62□□□□□ -1.19
GPNMB-213ENST00000492512 Q8NDZ9 215 aa7.62□□□□□ -1.19
GPNMB-213ENST00000492512 UQCR10Q9UDW1 63 aa7.62□□□□□ -1.19
GPNMB-213ENST00000492512 MT1HP80294 61 aa7.61□□□□□ -1.19
GPNMB-213ENST00000492512 IGLC3P0DOY3 106 aa7.6□□□□□ -1.19
GPNMB-213ENST00000492512 PMVKQ15126 192 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms