RNA–Protein interactions for RNA: ENST00000492235.1

TREX1-204, Transcript of three prime repair exonuclease 1, humanhuman

TSL 3

Gene TREX1, Length 696 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-204ENST00000492235 LEPROTL1O95214 131 aa7.22□□□□□ -1.25
TREX1-204ENST00000492235 UBE2AP49459 152 aa7.22□□□□□ -1.25
TREX1-204ENST00000492235 NDUFA6P56556 154 aa7.22□□□□□ -1.25
TREX1-204ENST00000492235 LINC00310P59036 64 aa7.22□□□□□ -1.25
TREX1-204ENST00000492235 HSPB8Q9UJY1 196 aa7.22□□□□□ -1.25
TREX1-204ENST00000492235 IGLV5-39A0A0G2JS06 123 aa7.21□□□□□ -1.26
TREX1-204ENST00000492235 HIST1H2BKO60814 126 aa7.21□□□□□ -1.26
TREX1-204ENST00000492235 HIST1H2BJP06899 126 aa7.21□□□□□ -1.26
TREX1-204ENST00000492235 HIST1H2BOP23527 126 aa7.21□□□□□ -1.26
TREX1-204ENST00000492235 HIST1H2BBP33778 126 aa7.21□□□□□ -1.26
TREX1-204ENST00000492235 HIST1H2BDP58876 126 aa7.21□□□□□ -1.26
TREX1-204ENST00000492235 HIST1H2BCP62807 126 aa7.21□□□□□ -1.26
TREX1-204ENST00000492235 HIST2H2BEQ16778 126 aa7.21□□□□□ -1.26
TREX1-204ENST00000492235 FAM229BQ4G0N7 80 aa7.21□□□□□ -1.26
TREX1-204ENST00000492235 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.21□□□□□ -1.26
TREX1-204ENST00000492235 KRTAP13-1Q8IUC0 172 aa7.21□□□□□ -1.26
TREX1-204ENST00000492235 COX7B2Q8TF08 81 aa7.21□□□□□ -1.26
TREX1-204ENST00000492235 HIST1H2BHQ93079 126 aa7.21□□□□□ -1.26
TREX1-204ENST00000492235 HIST1H2BNQ99877 126 aa7.21□□□□□ -1.26
TREX1-204ENST00000492235 HIST1H2BMQ99879 126 aa7.21□□□□□ -1.26
TREX1-204ENST00000492235 CHTOPQ9Y3Y2 248 aaKnown RBP7.21□□□□□ -1.26
TREX1-204ENST00000492235 IGKV2D-26A0A0A0MRZ7 120 aa7.2□□□□□ -1.26
TREX1-204ENST00000492235 ZNF22P17026 224 aaPredicted RBP7.2□□□□□ -1.26
TREX1-204ENST00000492235 FAM19A2Q8N3H0 131 aa7.2□□□□□ -1.26
TREX1-204ENST00000492235 C11orf86A6NJI1 115 aa7.19□□□□□ -1.26
TREX1-204ENST00000492235 PPDPFQ9H3Y8 114 aa7.19□□□□□ -1.26
TREX1-204ENST00000492235 SPINK8P0C7L1 97 aa7.18□□□□□ -1.26
TREX1-204ENST00000492235 COA6Q5JTJ3 125 aaKnown RBP7.18□□□□□ -1.26
TREX1-204ENST00000492235 LCE2DQ5TA82 110 aaPredicted RBP7.18□□□□□ -1.26
TREX1-204ENST00000492235 NKAPP1Q8N9T2 125 aa7.18□□□□□ -1.26
TREX1-204ENST00000492235 IGKV2-28A0A075B6P5 120 aa7.17□□□□□ -1.26
TREX1-204ENST00000492235 ATP6V1G1O75348 118 aa7.17□□□□□ -1.26
TREX1-204ENST00000492235 IGKV2D-28P01615 120 aa7.17□□□□□ -1.26
TREX1-204ENST00000492235 PLNP26678 52 aa7.17□□□□□ -1.26
TREX1-204ENST00000492235 PRLHP81277 87 aa7.17□□□□□ -1.26
TREX1-204ENST00000492235 TMEM170BQ5T4T1 132 aa7.17□□□□□ -1.26
TREX1-204ENST00000492235 IGLV5-37A0A075B6J1 123 aa7.16□□□□□ -1.26
TREX1-204ENST00000492235 COX17Q14061 63 aa7.15□□□□□ -1.26
TREX1-204ENST00000492235 MAP1LC3CQ9BXW4 147 aa7.15□□□□□ -1.26
TREX1-204ENST00000492235 TMEM223A0PJW6 202 aa7.14□□□□□ -1.27
TREX1-204ENST00000492235 CTAG1AP78358 180 aa7.14□□□□□ -1.27
TREX1-204ENST00000492235 FAM19A1Q7Z5A9 133 aa7.14□□□□□ -1.27
TREX1-204ENST00000492235 C3orf22Q8N5N4 141 aa7.14□□□□□ -1.27
TREX1-204ENST00000492235 LINC01547P58512 204 aaPredicted RBP7.13□□□□□ -1.27
TREX1-204ENST00000492235 TMEM238C9JI98 176 aa7.12□□□□□ -1.27
TREX1-204ENST00000492235 DPM2O94777 84 aa7.12□□□□□ -1.27
TREX1-204ENST00000492235 FABP4P15090 132 aa7.12□□□□□ -1.27
TREX1-204ENST00000492235 ZNF625Q96I27 306 aaPredicted RBP7.12□□□□□ -1.27
TREX1-204ENST00000492235 LINC00587B1AMM8 73 aa7.11□□□□□ -1.27
TREX1-204ENST00000492235 HERV-K104P63124 156 aa7.11□□□□□ -1.27
TREX1-204ENST00000492235 LINC00337Q8N6G1 96 aa7.11□□□□□ -1.27
TREX1-204ENST00000492235 TMEM126AQ9H061 195 aa7.11□□□□□ -1.27
TREX1-204ENST00000492235 H0Y8G0 127 aa7.1□□□□□ -1.27
TREX1-204ENST00000492235 SYS1-DBNDD2H3BUS1 97 aa7.1□□□□□ -1.27
TREX1-204ENST00000492235 IGKCP01834 107 aa7.1□□□□□ -1.27
TREX1-204ENST00000492235 HERVK_113P61574 105 aa7.1□□□□□ -1.27
TREX1-204ENST00000492235 PLEKHB2Q96CS7 222 aa7.1□□□□□ -1.27
TREX1-204ENST00000492235 ERG28Q9UKR5 140 aa7.1□□□□□ -1.27
TREX1-204ENST00000492235 PFN2P35080 140 aa7.09□□□□□ -1.27
TREX1-204ENST00000492235 AKR1D1P51857 326 aa7.09□□□□□ -1.27
TREX1-204ENST00000492235 ASB16-AS1Q495Z4 193 aa7.09□□□□□ -1.27
TREX1-204ENST00000492235 SPAG11AQ6PDA7 123 aa7.09□□□□□ -1.27
TREX1-204ENST00000492235 PET117Q6UWS5 81 aa7.09□□□□□ -1.27
TREX1-204ENST00000492235 FP248Q71RG6 208 aaPredicted RBP7.09□□□□□ -1.27
TREX1-204ENST00000492235 M0R378 163 aa7.08□□□□□ -1.28
TREX1-204ENST00000492235 VPREB1P12018 145 aa7.08□□□□□ -1.28
TREX1-204ENST00000492235 NMUP48645 174 aa7.08□□□□□ -1.28
TREX1-204ENST00000492235 KRTAP13-3Q3SY46 172 aa7.08□□□□□ -1.28
TREX1-204ENST00000492235 LINC01545Q5VT33 79 aa7.08□□□□□ -1.28
TREX1-204ENST00000492235 HIGD2AQ9BW72 106 aa7.08□□□□□ -1.28
TREX1-204ENST00000492235 KRTAP4-1Q9BYQ7 146 aa7.08□□□□□ -1.28
TREX1-204ENST00000492235 MYMXA0A1B0GTQ4 84 aa7.07□□□□□ -1.28
TREX1-204ENST00000492235 LEPROTO15243 131 aa7.07□□□□□ -1.28
TREX1-204ENST00000492235 C4orf48Q5BLP8 95 aa7.06□□□□□ -1.28
TREX1-204ENST00000492235 SND1-IT1Q9HBX3 110 aa7.06□□□□□ -1.28
TREX1-204ENST00000492235 NDUFA12Q9UI09 145 aa7.06□□□□□ -1.28
TREX1-204ENST00000492235 C20orf202A1L168 122 aa7.05□□□□□ -1.28
TREX1-204ENST00000492235 E9PLD3 99 aa7.05□□□□□ -1.28
TREX1-204ENST00000492235 J3QQQ9 107 aa7.05□□□□□ -1.28
TREX1-204ENST00000492235 RPL24P83731 157 aaKnown RBP7.05□□□□□ -1.28
TREX1-204ENST00000492235 DAND5Q8N907 189 aa7.05□□□□□ -1.28
TREX1-204ENST00000492235 C3orf79P0CE67 100 aa7.04□□□□□ -1.28
TREX1-204ENST00000492235 Q8NDZ9 215 aa7.04□□□□□ -1.28
TREX1-204ENST00000492235 SPRR4Q96PI1 79 aa7.04□□□□□ -1.28
TREX1-204ENST00000492235 LGALS3P17931 250 aaKnown RBP7.03□□□□□ -1.28
TREX1-204ENST00000492235 SEC61BP60468 96 aaKnown RBP7.03□□□□□ -1.28
TREX1-204ENST00000492235 MEIG1Q5JSS6 88 aa7.03□□□□□ -1.28
TREX1-204ENST00000492235 Q8NBF4 154 aa7.03□□□□□ -1.28
TREX1-204ENST00000492235 PMCHL2Q9BQD1 86 aa7.03□□□□□ -1.28
TREX1-204ENST00000492235 S100A6P06703 90 aa7.02□□□□□ -1.29
TREX1-204ENST00000492235 LINC00158P58513 81 aa7.02□□□□□ -1.29
TREX1-204ENST00000492235 S100A2P29034 98 aa7.01□□□□□ -1.29
TREX1-204ENST00000492235 TSPEAR-AS2P59090 65 aa7.01□□□□□ -1.29
TREX1-204ENST00000492235 KRTDAPP60985 99 aa7.01□□□□□ -1.29
TREX1-204ENST00000492235 LOC107984156A0A0G2JMH3 177 aa7□□□□□ -1.29
TREX1-204ENST00000492235 SMIM13P0DJ93 91 aa7□□□□□ -1.29
TREX1-204ENST00000492235 ARL17AQ8IVW1 177 aa7□□□□□ -1.29
TREX1-204ENST00000492235 HIST3H2BBQ8N257 126 aa7□□□□□ -1.29
TREX1-204ENST00000492235 ZNF706Q9Y5V0 76 aaPredicted RBP7□□□□□ -1.29
TREX1-204ENST00000492235 SPINK1P00995 79 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms