RNA–Protein interactions for RNA: ENST00000490258.1

CRNKL1-203, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 2

Gene CRNKL1, Length 733 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-203ENST00000490258 H0YGX0 51 aa2.4□□□□□ -2.03
CRNKL1-203ENST00000490258 IGKV2D-28P01615 120 aa2.4□□□□□ -2.03
CRNKL1-203ENST00000490258 CRPP02741 224 aa2.4□□□□□ -2.03
CRNKL1-203ENST00000490258 RBMY1A1P0DJD3 496 aaKnown RBP2.4□□□□□ -2.03
CRNKL1-203ENST00000490258 RBMY1CP0DJD4 496 aa2.4□□□□□ -2.03
CRNKL1-203ENST00000490258 IGHV4-30-4P0DP06 118 aa2.4□□□□□ -2.03
CRNKL1-203ENST00000490258 RBMY1FQ15415 496 aaKnown RBP2.4□□□□□ -2.03
CRNKL1-203ENST00000490258 SS18Q15532 418 aa2.4□□□□□ -2.03
CRNKL1-203ENST00000490258 S100A7L2Q5SY68 101 aa2.4□□□□□ -2.03
CRNKL1-203ENST00000490258 LINC00337Q8N6G1 96 aa2.4□□□□□ -2.03
CRNKL1-203ENST00000490258 C11orf72Q8NBR9 251 aa2.4□□□□□ -2.03
CRNKL1-203ENST00000490258 DEFB104AQ8WTQ1 72 aa2.4□□□□□ -2.03
CRNKL1-203ENST00000490258 LINC00846Q9NV44 126 aa2.4□□□□□ -2.03
CRNKL1-203ENST00000490258 ATRQ13535 2644 aa2.4□□□□□ -2.03
CRNKL1-203ENST00000490258 MUC4Q99102 2169 aa2.4□□□□□ -2.03
CRNKL1-203ENST00000490258 HIVEP1P15822 2718 aa2.39□□□□□ -2.03
CRNKL1-203ENST00000490258 NACAE9PAV3 2078 aa2.39□□□□□ -2.03
CRNKL1-203ENST00000490258 TRBV10-1A0A0K0K1A3 114 aa2.39□□□□□ -2.03
CRNKL1-203ENST00000490258 CDK2AP2O75956 126 aa2.39□□□□□ -2.03
CRNKL1-203ENST00000490258 SYNJ2BPP57105 145 aa2.39□□□□□ -2.03
CRNKL1-203ENST00000490258 NPC2P61916 151 aa2.39□□□□□ -2.03
CRNKL1-203ENST00000490258 SNRPD3P62318 126 aaKnown RBP2.39□□□□□ -2.03
CRNKL1-203ENST00000490258 SPINK13Q1W4C9 94 aa2.39□□□□□ -2.03
CRNKL1-203ENST00000490258 C9orf129Q5T035 196 aaKnown RBP2.39□□□□□ -2.03
CRNKL1-203ENST00000490258 Q6ZVQ6 151 aa2.39□□□□□ -2.03
CRNKL1-203ENST00000490258 DSCR8Q96T75 97 aa2.39□□□□□ -2.03
CRNKL1-203ENST00000490258 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.38□□□□□ -2.03
CRNKL1-203ENST00000490258 TRAV12-2A0A075B6T6 113 aa2.38□□□□□ -2.03
CRNKL1-203ENST00000490258 TRAV13-1A0A0B4J241 112 aa2.38□□□□□ -2.03
CRNKL1-203ENST00000490258 IGKV2-29A2NJV5 120 aaPredicted RBP2.38□□□□□ -2.03
CRNKL1-203ENST00000490258 RBMY1BA6NDE4 496 aaKnown RBP2.38□□□□□ -2.03
CRNKL1-203ENST00000490258 RBMY1EA6NEQ0 496 aaKnown RBP2.38□□□□□ -2.03
CRNKL1-203ENST00000490258 IBA57-AS1B1ANH7 110 aa2.38□□□□□ -2.03
CRNKL1-203ENST00000490258 IGKV3-20P01619 116 aa2.38□□□□□ -2.03
CRNKL1-203ENST00000490258 PRM2P04554 102 aa2.38□□□□□ -2.03
CRNKL1-203ENST00000490258 CCKP06307 115 aa2.38□□□□□ -2.03
CRNKL1-203ENST00000490258 RBMY1DP0C7P1 496 aaKnown RBP2.38□□□□□ -2.03
CRNKL1-203ENST00000490258 COX6A2Q02221 97 aa2.38□□□□□ -2.03
CRNKL1-203ENST00000490258 KLKP1Q107X0 134 aa2.38□□□□□ -2.03
CRNKL1-203ENST00000490258 RNASE13Q5GAN3 156 aaKnown RBP2.38□□□□□ -2.03
CRNKL1-203ENST00000490258 SMIM11BQ8TCY0 68 aa2.38□□□□□ -2.03
CRNKL1-203ENST00000490258 Q9HAA7 133 aa2.38□□□□□ -2.03
CRNKL1-203ENST00000490258 C14orf132Q9NPU4 83 aa2.38□□□□□ -2.03
CRNKL1-203ENST00000490258 SERP1Q9Y6X1 66 aa2.38□□□□□ -2.03
CRNKL1-203ENST00000490258 A0A087WVE0 104 aa2.37□□□□□ -2.03
CRNKL1-203ENST00000490258 FAM236DA0A1B0GTK5 79 aa2.37□□□□□ -2.03
CRNKL1-203ENST00000490258 JMJD7-PLA2G4BH0Y9G9 81 aa2.37□□□□□ -2.03
CRNKL1-203ENST00000490258 H7BZZ5 65 aa2.37□□□□□ -2.03
CRNKL1-203ENST00000490258 FAM236CP0DP71 79 aa2.37□□□□□ -2.03
CRNKL1-203ENST00000490258 CCL18P55774 89 aa2.37□□□□□ -2.03
CRNKL1-203ENST00000490258 ATP5EP56381 51 aaPredicted RBP2.37□□□□□ -2.03
CRNKL1-203ENST00000490258 RPL36AP83881 106 aaKnown RBP2.37□□□□□ -2.03
CRNKL1-203ENST00000490258 C4orf26Q17RF5 130 aa2.37□□□□□ -2.03
CRNKL1-203ENST00000490258 LINC01006Q8NI28 216 aa2.37□□□□□ -2.03
CRNKL1-203ENST00000490258 SND1-IT1Q9HBX3 110 aa2.37□□□□□ -2.03
CRNKL1-203ENST00000490258 RETNQ9HD89 108 aa2.37□□□□□ -2.03
CRNKL1-203ENST00000490258 CDC42SE2Q9NRR3 84 aa2.37□□□□□ -2.03
CRNKL1-203ENST00000490258 Q9UF83 564 aa2.37□□□□□ -2.03
CRNKL1-203ENST00000490258 PRO0628Q9UI54 55 aa2.37□□□□□ -2.03
CRNKL1-203ENST00000490258 V9GYY9 64 aa2.37□□□□□ -2.03
CRNKL1-203ENST00000490258 NIPBLQ6KC79 2804 aaeCLIP2.37□□□□□ -2.032e-6■■□□□ 12.2
CRNKL1-203ENST00000490258 STAB1Q9NY15 2570 aa2.37□□□□□ -2.03
CRNKL1-203ENST00000490258 MAP1AP78559 2803 aaPredicted RBP2.36□□□□□ -2.03
CRNKL1-203ENST00000490258 BIRC6Q9NR09 4857 aa2.36□□□□□ -2.03
CRNKL1-203ENST00000490258 TRAV7A0A075B6U4 112 aa2.36□□□□□ -2.03
CRNKL1-203ENST00000490258 LOC110117498A0A087WWA1 95 aa2.36□□□□□ -2.03
CRNKL1-203ENST00000490258 IGLV9-49A0A0B4J1Y8 123 aa2.36□□□□□ -2.03
CRNKL1-203ENST00000490258 IGKV3D-7A0A0C4DH55 119 aa2.36□□□□□ -2.03
CRNKL1-203ENST00000490258 TRBV6-4A0A1B0GX49 114 aa2.36□□□□□ -2.03
CRNKL1-203ENST00000490258 KNCNA6PVL3 124 aa2.36□□□□□ -2.03
CRNKL1-203ENST00000490258 J3QLI3 93 aa2.36□□□□□ -2.03
CRNKL1-203ENST00000490258 K7EQD1 137 aa2.36□□□□□ -2.03
CRNKL1-203ENST00000490258 PFN2P35080 140 aa2.36□□□□□ -2.03
CRNKL1-203ENST00000490258 XCL1P47992 114 aa2.36□□□□□ -2.03
CRNKL1-203ENST00000490258 HRCT1Q6UXD1 115 aa2.36□□□□□ -2.03
CRNKL1-203ENST00000490258 NTM-AS1Q6ZSK4 140 aa2.36□□□□□ -2.03
CRNKL1-203ENST00000490258 LINC00336Q6ZUF6 198 aa2.36□□□□□ -2.03
CRNKL1-203ENST00000490258 MIR7-3HGQ8N6C7 128 aa2.36□□□□□ -2.03
CRNKL1-203ENST00000490258 COX7B2Q8TF08 81 aa2.36□□□□□ -2.03
CRNKL1-203ENST00000490258 TMEM243Q9BU79 118 aa2.36□□□□□ -2.03
CRNKL1-203ENST00000490258 C16orf95Q9H693 158 aa2.36□□□□□ -2.03
CRNKL1-203ENST00000490258 ORMDL1Q9P0S3 153 aa2.36□□□□□ -2.03
CRNKL1-203ENST00000490258 XCL2Q9UBD3 114 aa2.36□□□□□ -2.03
CRNKL1-203ENST00000490258 NOTCH1P46531 2555 aa2.36□□□□□ -2.03
CRNKL1-203ENST00000490258 JMJD1CQ15652 2540 aa2.35□□□□□ -2.03
CRNKL1-203ENST00000490258 PCLOQ9Y6V0 5065 aa2.35□□□□□ -2.03
CRNKL1-203ENST00000490258 SMIM26A0A096LP01 95 aa2.35□□□□□ -2.03
CRNKL1-203ENST00000490258 IGHV3-73A0A0B4J1V6 119 aa2.35□□□□□ -2.03
CRNKL1-203ENST00000490258 IGHV3OR16-9A0A0B4J2B5 98 aa2.35□□□□□ -2.03
CRNKL1-203ENST00000490258 IGHV3-38A0A0C4DH36 116 aa2.35□□□□□ -2.03
CRNKL1-203ENST00000490258 NCR3O14931 201 aa2.35□□□□□ -2.03
CRNKL1-203ENST00000490258 LECT2O14960 151 aa2.35□□□□□ -2.03
CRNKL1-203ENST00000490258 NDUFC1O43677 76 aa2.35□□□□□ -2.03
CRNKL1-203ENST00000490258 INSP01308 110 aa2.35□□□□□ -2.03
CRNKL1-203ENST00000490258 RPL35AP18077 110 aaKnown RBP2.35□□□□□ -2.03
CRNKL1-203ENST00000490258 C9orf66Q5T8R8 295 aa2.35□□□□□ -2.03
CRNKL1-203ENST00000490258 NSD1Q96L73 2696 aaPredicted RBP2.35□□□□□ -2.03
CRNKL1-203ENST00000490258 ANK2Q01484 3957 aa2.34□□□□□ -2.03
CRNKL1-203ENST00000490258 IGLV5-37A0A075B6J1 123 aa2.34□□□□□ -2.03
CRNKL1-203ENST00000490258 TMEM256-PLSCR3K7ERE1 68 aa2.34□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 94.1 ms