RNA–Protein interactions for RNA: ENST00000489611.5

COL9A1-208, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 2

Gene COL9A1, Length 1,940 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-208ENST00000489611 NANOS2P60321 138 aaKnown RBP10.06□□□□□ -0.8
COL9A1-208ENST00000489611 C9orf116Q5BN46 136 aaPredicted RBP10.06□□□□□ -0.8
COL9A1-208ENST00000489611 IMUPQ9GZP8 106 aa10.06□□□□□ -0.8
COL9A1-208ENST00000489611 DEFB131BA0A096LNP1 70 aa10.05□□□□□ -0.8
COL9A1-208ENST00000489611 ZNF561-AS1K7EIQ3 104 aa10.05□□□□□ -0.8
COL9A1-208ENST00000489611 LINC01556Q5JQF7 62 aa10.05□□□□□ -0.8
COL9A1-208ENST00000489611 SDIM1Q6ZPB5 146 aa10.05□□□□□ -0.8
COL9A1-208ENST00000489611 WFDC10BQ8IUB3 73 aa10.05□□□□□ -0.8
COL9A1-208ENST00000489611 NOTCH1P46531 2555 aa10.05□□□□□ -0.8
COL9A1-208ENST00000489611 C10orf25Q5T742 122 aa10.05□□□□□ -0.8
COL9A1-208ENST00000489611 Q8N814 137 aa10.05□□□□□ -0.8
COL9A1-208ENST00000489611 H3BQ85 93 aa10.04□□□□□ -0.8
COL9A1-208ENST00000489611 TMEM256-PLSCR3K7ERE1 68 aa10.04□□□□□ -0.8
COL9A1-208ENST00000489611 LINC00643Q86TS7 51 aa10.04□□□□□ -0.8
COL9A1-208ENST00000489611 C6orf223Q8N319 242 aa10.04□□□□□ -0.8
COL9A1-208ENST00000489611 C2orf48Q96LS8 159 aa10.04□□□□□ -0.8
COL9A1-208ENST00000489611 TRBV7-7A0A0K0K1E9 115 aa10.03□□□□□ -0.8
COL9A1-208ENST00000489611 JMJD7-PLA2G4BH0Y9G9 81 aa10.03□□□□□ -0.8
COL9A1-208ENST00000489611 KRTAP21-3Q3LHN1 58 aa10.03□□□□□ -0.8
COL9A1-208ENST00000489611 ESRGQ1W209 222 aa10.03□□□□□ -0.8
COL9A1-208ENST00000489611 MGAM2Q2M2H8 2515 aa10.03□□□□□ -0.8
COL9A1-208ENST00000489611 IGLV6-57P01721 117 aa10.02□□□□□ -0.81
COL9A1-208ENST00000489611 PRR3P79522 188 aaKnown RBP10.02□□□□□ -0.81
COL9A1-208ENST00000489611 TTC32Q5I0X7 151 aa10.02□□□□□ -0.81
COL9A1-208ENST00000489611 MRAPQ8TCY5 172 aa10.02□□□□□ -0.81
COL9A1-208ENST00000489611 DNHD1Q96M86 4753 aa10.02□□□□□ -0.81
COL9A1-208ENST00000489611 KRTAP26-1Q6PEX3 210 aa10.01□□□□□ -0.81
COL9A1-208ENST00000489611 C1orf43Q9BWL3 253 aa10.01□□□□□ -0.81
COL9A1-208ENST00000489611 C6orf48Q9UBA6 75 aa10.01□□□□□ -0.81
COL9A1-208ENST00000489611 NCR3O14931 201 aa10.01□□□□□ -0.81
COL9A1-208ENST00000489611 CAMK2N2Q96S95 79 aa10.01□□□□□ -0.81
COL9A1-208ENST00000489611 C6orf99Q4VX62 202 aa10□□□□□ -0.81
COL9A1-208ENST00000489611 GAGE2AQ6NT46 116 aa9.99□□□□□ -0.81
COL9A1-208ENST00000489611 ANAPC13Q9BS18 74 aa9.99□□□□□ -0.81
COL9A1-208ENST00000489611 NBEAL1Q6ZS30 2694 aa9.99□□□□□ -0.81
COL9A1-208ENST00000489611 TRAV10A0A0B4J240 114 aa9.99□□□□□ -0.81
COL9A1-208ENST00000489611 GHRHP01286 108 aa9.99□□□□□ -0.81
COL9A1-208ENST00000489611 DNAH10OSP0CZ25 163 aa9.98□□□□□ -0.81
COL9A1-208ENST00000489611 NDUFV3P56181 108 aaKnown RBP9.98□□□□□ -0.81
COL9A1-208ENST00000489611 LINC00575Q6W349 94 aa9.98□□□□□ -0.81
COL9A1-208ENST00000489611 LINC00526Q96FQ7 95 aa9.97□□□□□ -0.81
COL9A1-208ENST00000489611 TRBV7-6A0A0J9YX20 115 aa9.97□□□□□ -0.81
COL9A1-208ENST00000489611 Q8NDZ9 215 aa9.97□□□□□ -0.81
COL9A1-208ENST00000489611 NDUFC2-KCTD14E9PQ53 114 aa9.96□□□□□ -0.81
COL9A1-208ENST00000489611 RPL18AQ02543 176 aaKnown RBP9.96□□□□□ -0.81
COL9A1-208ENST00000489611 hADV29S1A0JD25 119 aa9.95□□□□□ -0.82
COL9A1-208ENST00000489611 C15orf56Q8N910 161 aa9.95□□□□□ -0.82
COL9A1-208ENST00000489611 TM2D3Q9BRN9 247 aa9.95□□□□□ -0.82
COL9A1-208ENST00000489611 C14orf132Q9NPU4 83 aa9.95□□□□□ -0.82
COL9A1-208ENST00000489611 TRAV23DV6A0A075B6W5 121 aa9.94□□□□□ -0.82
COL9A1-208ENST00000489611 SLPIP03973 132 aa9.94□□□□□ -0.82
COL9A1-208ENST00000489611 DIRC1Q969H9 104 aa9.94□□□□□ -0.82
COL9A1-208ENST00000489611 CCKP06307 115 aa9.93□□□□□ -0.82
COL9A1-208ENST00000489611 HIGD2BQ4VC39 106 aa9.93□□□□□ -0.82
COL9A1-208ENST00000489611 SMCR5Q8TEV8 140 aa9.93□□□□□ -0.82
COL9A1-208ENST00000489611 IGKV2D-24A0A075B6R9 120 aa9.92□□□□□ -0.82
COL9A1-208ENST00000489611 M0R378 163 aa9.92□□□□□ -0.82
COL9A1-208ENST00000489611 Q6ZRU5 148 aa9.92□□□□□ -0.82
COL9A1-208ENST00000489611 TRBV10-3A0A0K0K1G6 114 aa9.91□□□□□ -0.82
COL9A1-208ENST00000489611 VPREB1P12018 145 aa9.91□□□□□ -0.82
COL9A1-208ENST00000489611 RMI2Q96E14 147 aa9.91□□□□□ -0.82
COL9A1-208ENST00000489611 XAGE1AQ9HD64 81 aa9.91□□□□□ -0.82
COL9A1-208ENST00000489611 ZNF73O43830 326 aaPredicted RBP9.9□□□□□ -0.82
COL9A1-208ENST00000489611 SYCNQ0VAF6 134 aa9.9□□□□□ -0.82
COL9A1-208ENST00000489611 C9orf129Q5T035 196 aaKnown RBP9.9□□□□□ -0.82
COL9A1-208ENST00000489611 TENM3Q9P273 2699 aa9.9□□□□□ -0.83
COL9A1-208ENST00000489611 HUWE1Q7Z6Z7 4374 aaKnown RBP9.89□□□□□ -0.83
COL9A1-208ENST00000489611 PDE6GP18545 87 aa9.89□□□□□ -0.83
COL9A1-208ENST00000489611 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.89□□□□□ -0.83
COL9A1-208ENST00000489611 NHLRC4P0CG21 123 aaPredicted RBP9.88□□□□□ -0.83
COL9A1-208ENST00000489611 TLX1NBP0CAT3 122 aa9.88□□□□□ -0.83
COL9A1-208ENST00000489611 COX7BP24311 80 aa9.88□□□□□ -0.83
COL9A1-208ENST00000489611 ELOF1P60002 83 aaKnown RBP9.88□□□□□ -0.83
COL9A1-208ENST00000489611 Q6JHZ5 121 aa9.88□□□□□ -0.83
COL9A1-208ENST00000489611 UPK3BQ9BT76 320 aa9.87□□□□□ -0.83
COL9A1-208ENST00000489611 RBM3P98179 157 aaKnown RBP9.86□□□□□ -0.83
COL9A1-208ENST00000489611 ATP5EP2Q5VTU8 51 aa9.86□□□□□ -0.83
COL9A1-208ENST00000489611 LOC110117498A0A087WWA1 95 aa9.86□□□□□ -0.83
COL9A1-208ENST00000489611 LINC00846Q9NV44 126 aa9.86□□□□□ -0.83
COL9A1-208ENST00000489611 LINC00588Q9Y4M8 146 aa9.86□□□□□ -0.83
COL9A1-208ENST00000489611 B9D2Q9BPU9 175 aa9.85□□□□□ -0.83
COL9A1-208ENST00000489611 Q6ZRP5 223 aa9.84□□□□□ -0.83
COL9A1-208ENST00000489611 PLA2G2DQ9UNK4 145 aa9.84□□□□□ -0.83
COL9A1-208ENST00000489611 Q6ZQY7 126 aa9.84□□□□□ -0.83
COL9A1-208ENST00000489611 FAM236AA0A1B0GUQ0 79 aa9.83□□□□□ -0.84
COL9A1-208ENST00000489611 FAM236BA0A1B0GV22 79 aa9.83□□□□□ -0.84
COL9A1-208ENST00000489611 LAMTOR3Q9UHA4 124 aa9.83□□□□□ -0.84
COL9A1-208ENST00000489611 DNAH9Q9NYC9 4486 aa9.82□□□□□ -0.84
COL9A1-208ENST00000489611 DSCR8Q96T75 97 aa9.82□□□□□ -0.84
COL9A1-208ENST00000489611 NKAPP1Q8N9T2 125 aa9.81□□□□□ -0.84
COL9A1-208ENST00000489611 Q6ZQT0 140 aa9.8□□□□□ -0.84
COL9A1-208ENST00000489611 UBL5Q9BZL1 73 aa9.8□□□□□ -0.84
COL9A1-208ENST00000489611 LINC00528Q8N1L1 170 aa9.8□□□□□ -0.84
COL9A1-208ENST00000489611 KCNQ1DNQ9H478 68 aa9.8□□□□□ -0.84
COL9A1-208ENST00000489611 USP17L23D6RBM5 183 aa9.78□□□□□ -0.84
COL9A1-208ENST00000489611 IGLV5-37A0A075B6J1 123 aa9.78□□□□□ -0.84
COL9A1-208ENST00000489611 HIST1H4AP62805 103 aaKnown RBP9.78□□□□□ -0.84
COL9A1-208ENST00000489611 ATOX1O00244 68 aa9.77□□□□□ -0.85
COL9A1-208ENST00000489611 TRBV7-4A0A0J9YYF1 115 aa9.73□□□□□ -0.85
COL9A1-208ENST00000489611 PRYO14603 147 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms