RNA–Protein interactions for RNA: ENST00000489485.5

CLDN11-209, Transcript of claudin 11, humanhuman

TSL 2

Gene CLDN11, Length 1,854 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-209ENST00000489485 J3QR89 54 aa9.21□□□□□ -0.93
CLDN11-209ENST00000489485 SFTA2Q6UW10 78 aa9.21□□□□□ -0.93
CLDN11-209ENST00000489485 A0A0J9YXY3 114 aa9.21□□□□□ -0.94
CLDN11-209ENST00000489485 A0A0U1RRA0 63 aa9.21□□□□□ -0.94
CLDN11-209ENST00000489485 C16orf90A8MZG2 172 aa9.21□□□□□ -0.94
CLDN11-209ENST00000489485 HERV-K104P63124 156 aa9.21□□□□□ -0.94
CLDN11-209ENST00000489485 SRSF9Q13242 221 aaKnown RBP eCLIP9.21□□□□□ -0.94
CLDN11-209ENST00000489485 LYRM7Q5U5X0 104 aa9.21□□□□□ -0.94
CLDN11-209ENST00000489485 PKHD1P08F94 4074 aa9.21□□□□□ -0.94
CLDN11-209ENST00000489485 PFN2P35080 140 aa9.2□□□□□ -0.94
CLDN11-209ENST00000489485 MEIG1Q5JSS6 88 aa9.2□□□□□ -0.94
CLDN11-209ENST00000489485 TRBV30A0A0K0K1B3 111 aa9.19□□□□□ -0.94
CLDN11-209ENST00000489485 SPANXB1Q9NS25 103 aaPredicted RBP9.19□□□□□ -0.94
CLDN11-209ENST00000489485 ERG28Q9UKR5 140 aa9.19□□□□□ -0.94
CLDN11-209ENST00000489485 DNAH5Q8TE73 4624 aa9.18□□□□□ -0.94
CLDN11-209ENST00000489485 RPL24P83731 157 aaKnown RBP9.18□□□□□ -0.94
CLDN11-209ENST00000489485 LINC00158P58513 81 aa9.17□□□□□ -0.94
CLDN11-209ENST00000489485 CIRBPQ14011 172 aaKnown RBP9.16□□□□□ -0.94
CLDN11-209ENST00000489485 SDIM1Q6ZPB5 146 aa9.16□□□□□ -0.94
CLDN11-209ENST00000489485 DAND5Q8N907 189 aa9.16□□□□□ -0.94
CLDN11-209ENST00000489485 KRTAP10-1P60331 282 aa9.15□□□□□ -0.94
CLDN11-209ENST00000489485 RPL18AQ02543 176 aaKnown RBP9.15□□□□□ -0.94
CLDN11-209ENST00000489485 ADAMTSL4-AS1Q5T5F5 129 aa9.15□□□□□ -0.94
CLDN11-209ENST00000489485 EPPK1P58107 5090 aaKnown RBP9.15□□□□□ -0.94
CLDN11-209ENST00000489485 LOC107984640A0A0U1RRK4 108 aa9.15□□□□□ -0.95
CLDN11-209ENST00000489485 COX17Q14061 63 aa9.15□□□□□ -0.95
CLDN11-209ENST00000489485 LITAFQ99732 161 aa9.15□□□□□ -0.95
CLDN11-209ENST00000489485 IGKV2-24A0A0C4DH68 120 aa9.14□□□□□ -0.95
CLDN11-209ENST00000489485 H3BMG7 143 aa9.14□□□□□ -0.95
CLDN11-209ENST00000489485 NDUFC2-KCTD14E9PQ53 114 aa9.13□□□□□ -0.95
CLDN11-209ENST00000489485 GAGE2BQ13066 116 aa9.13□□□□□ -0.95
CLDN11-209ENST00000489485 Q6ZRP5 223 aa9.13□□□□□ -0.95
CLDN11-209ENST00000489485 MIR7-3HGQ8N6C7 128 aa9.13□□□□□ -0.95
CLDN11-209ENST00000489485 PKIGQ9Y2B9 76 aa9.13□□□□□ -0.95
CLDN11-209ENST00000489485 GAGE2EQ4V326 116 aa9.13□□□□□ -0.95
CLDN11-209ENST00000489485 GAGE2DQ9UEU5 116 aa9.13□□□□□ -0.95
CLDN11-209ENST00000489485 TRBV20-1A0A075B6N2 111 aa9.12□□□□□ -0.95
CLDN11-209ENST00000489485 A0A096LNI7 61 aa9.12□□□□□ -0.95
CLDN11-209ENST00000489485 TIMM17BO60830 172 aa9.12□□□□□ -0.95
CLDN11-209ENST00000489485 NPC2P61916 151 aa9.12□□□□□ -0.95
CLDN11-209ENST00000489485 DPH3Q96FX2 82 aa9.12□□□□□ -0.95
CLDN11-209ENST00000489485 TLX1NBP0CAT3 122 aa9.11□□□□□ -0.95
CLDN11-209ENST00000489485 CHTF8P0CG12 524 aa9.11□□□□□ -0.95
CLDN11-209ENST00000489485 XAGE1AQ9HD64 81 aa9.11□□□□□ -0.95
CLDN11-209ENST00000489485 A0A1B0GV72 72 aa9.11□□□□□ -0.95
CLDN11-209ENST00000489485 TSPAN13O95857 204 aa9.11□□□□□ -0.95
CLDN11-209ENST00000489485 SND1-IT1Q9HBX3 110 aa9.1□□□□□ -0.95
CLDN11-209ENST00000489485 FAM30AQ9NZY2 134 aa9.1□□□□□ -0.95
CLDN11-209ENST00000489485 PRO0461Q9UI25 63 aa9.1□□□□□ -0.95
CLDN11-209ENST00000489485 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.1□□□□□ -0.95
CLDN11-209ENST00000489485 LOC107984156A0A0G2JMH3 177 aa9.09□□□□□ -0.95
CLDN11-209ENST00000489485 PANO1I0J062 215 aa9.09□□□□□ -0.95
CLDN11-209ENST00000489485 ARL17AQ8IVW1 177 aa9.09□□□□□ -0.95
CLDN11-209ENST00000489485 LRP1BQ9NZR2 4599 aa9.09□□□□□ -0.96
CLDN11-209ENST00000489485 EIF4EBP3O60516 100 aaPredicted RBP9.08□□□□□ -0.96
CLDN11-209ENST00000489485 SCGB1A1P11684 91 aa9.08□□□□□ -0.96
CLDN11-209ENST00000489485 SPANXDQ9BXN6 97 aa9.08□□□□□ -0.96
CLDN11-209ENST00000489485 SPANXCQ9NY87 97 aa9.08□□□□□ -0.96
CLDN11-209ENST00000489485 LINC00474Q9P2X8 69 aa9.08□□□□□ -0.96
CLDN11-209ENST00000489485 PRO1854Q9UHT4 67 aa9.08□□□□□ -0.96
CLDN11-209ENST00000489485 DYNC1H1Q14204 4646 aaKnown RBP9.08□□□□□ -0.96
CLDN11-209ENST00000489485 PSMB2P49721 201 aa9.08□□□□□ -0.96
CLDN11-209ENST00000489485 ETDBQ3ZM63 59 aa9.08□□□□□ -0.96
CLDN11-209ENST00000489485 LINC00308Q8TCZ7 52 aa9.07□□□□□ -0.96
CLDN11-209ENST00000489485 SIGMAR1Q99720 223 aa9.07□□□□□ -0.96
CLDN11-209ENST00000489485 A0A0B4J2C4 111 aa9.06□□□□□ -0.96
CLDN11-209ENST00000489485 CFC1BP0CG36 223 aa9.06□□□□□ -0.96
CLDN11-209ENST00000489485 CFC1P0CG37 223 aa9.06□□□□□ -0.96
CLDN11-209ENST00000489485 C9orf129Q5T035 196 aaKnown RBP9.06□□□□□ -0.96
CLDN11-209ENST00000489485 SOSTDC1Q6X4U4 206 aa9.06□□□□□ -0.96
CLDN11-209ENST00000489485 Q6ZSA8 131 aa9.06□□□□□ -0.96
CLDN11-209ENST00000489485 MUSTN1Q8IVN3 82 aa9.06□□□□□ -0.96
CLDN11-209ENST00000489485 SPACA4Q8TDM5 124 aa9.06□□□□□ -0.96
CLDN11-209ENST00000489485 HAMPP81172 84 aa9.06□□□□□ -0.96
CLDN11-209ENST00000489485 SCGB1C2P0DMR2 95 aa9.04□□□□□ -0.96
CLDN11-209ENST00000489485 A0A087WYN8 130 aa9.04□□□□□ -0.96
CLDN11-209ENST00000489485 FAM168BA1KXE4 195 aa9.03□□□□□ -0.96
CLDN11-209ENST00000489485 IFITM1P13164 125 aa9.03□□□□□ -0.96
CLDN11-209ENST00000489485 SCXQ7RTU7 201 aa9.03□□□□□ -0.96
CLDN11-209ENST00000489485 CIRBP-AS1Q8TBR5 109 aa9.03□□□□□ -0.96
CLDN11-209ENST00000489485 M0QXV9 152 aa9.02□□□□□ -0.96
CLDN11-209ENST00000489485 DNAH8Q96JB1 4490 aa9.02□□□□□ -0.97
CLDN11-209ENST00000489485 Q8NDZ9 215 aa9.02□□□□□ -0.97
CLDN11-209ENST00000489485 COPS9Q8WXC6 57 aa9.02□□□□□ -0.97
CLDN11-209ENST00000489485 A0A1W2PNN7 141 aa9.01□□□□□ -0.97
CLDN11-209ENST00000489485 TCL1BO95988 128 aa9.01□□□□□ -0.97
CLDN11-209ENST00000489485 XGP55808 180 aa9.01□□□□□ -0.97
CLDN11-209ENST00000489485 TEN1Q86WV5 123 aa9.01□□□□□ -0.97
CLDN11-209ENST00000489485 PPDPFLQ8WWR9 84 aa9.01□□□□□ -0.97
CLDN11-209ENST00000489485 PRR3P79522 188 aaKnown RBP9□□□□□ -0.97
CLDN11-209ENST00000489485 SERTAD4-AS1Q5TG53 156 aa9□□□□□ -0.97
CLDN11-209ENST00000489485 FAM19A5Q7Z5A7 132 aaPredicted RBP9□□□□□ -0.97
CLDN11-209ENST00000489485 MTURNQ8N3F0 131 aa9□□□□□ -0.97
CLDN11-209ENST00000489485 SMCPP49901 116 aaPredicted RBP9□□□□□ -0.97
CLDN11-209ENST00000489485 CDK2AP2O75956 126 aa8.99□□□□□ -0.97
CLDN11-209ENST00000489485 PLAC8Q9NZF1 115 aa8.99□□□□□ -0.97
CLDN11-209ENST00000489485 ATXN8Q156A1 80 aa8.98□□□□□ -0.97
CLDN11-209ENST00000489485 Q1RN00 199 aa8.98□□□□□ -0.97
CLDN11-209ENST00000489485 KRTAP7-1Q8IUC3 87 aa8.98□□□□□ -0.97
CLDN11-209ENST00000489485 VPREB1P12018 145 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms