RNA–Protein interactions for RNA: ENST00000489357.5

VTI1A-207, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 3

Gene VTI1A, Length 444 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-207ENST00000489357 NPC2P61916 151 aa5.76□□□□□ -1.49
VTI1A-207ENST00000489357 GVQW2A0A096LPI5 108 aaPredicted RBP5.75□□□□□ -1.49
VTI1A-207ENST00000489357 CCL18P55774 89 aa5.75□□□□□ -1.49
VTI1A-207ENST00000489357 KIAA0087Q14695 138 aa5.75□□□□□ -1.49
VTI1A-207ENST00000489357 LYPD5Q6UWN5 251 aa5.75□□□□□ -1.49
VTI1A-207ENST00000489357 C2orf82Q6UX34 121 aa5.75□□□□□ -1.49
VTI1A-207ENST00000489357 A0A0J9YWU9 116 aa5.74□□□□□ -1.49
VTI1A-207ENST00000489357 FAM240AA0A1B0GVK7 77 aa5.74□□□□□ -1.49
VTI1A-207ENST00000489357 A0A1B0GX51 115 aa5.74□□□□□ -1.49
VTI1A-207ENST00000489357 HTN3P15516 51 aa5.74□□□□□ -1.49
VTI1A-207ENST00000489357 PCP4P48539 62 aa5.74□□□□□ -1.49
VTI1A-207ENST00000489357 MTURNQ8N3F0 131 aa5.74□□□□□ -1.49
VTI1A-207ENST00000489357 SIGMAR1Q99720 223 aa5.74□□□□□ -1.49
VTI1A-207ENST00000489357 CSMD3Q7Z407 3707 aa5.73□□□□□ -1.49
VTI1A-207ENST00000489357 IGKV2-28A0A075B6P5 120 aa5.73□□□□□ -1.49
VTI1A-207ENST00000489357 A0A0U1RRA0 63 aa5.73□□□□□ -1.49
VTI1A-207ENST00000489357 C3orf84H3BNL1 204 aa5.73□□□□□ -1.49
VTI1A-207ENST00000489357 IGKV2D-28P01615 120 aa5.73□□□□□ -1.49
VTI1A-207ENST00000489357 UBE2WQ96B02 151 aa5.73□□□□□ -1.49
VTI1A-207ENST00000489357 RETNQ9HD89 108 aa5.73□□□□□ -1.49
VTI1A-207ENST00000489357 PFN2P35080 140 aa5.72□□□□□ -1.49
VTI1A-207ENST00000489357 KRTAP10-2P60368 255 aa5.72□□□□□ -1.49
VTI1A-207ENST00000489357 LINC00337Q8N6G1 96 aa5.72□□□□□ -1.49
VTI1A-207ENST00000489357 C15orf53Q8NAA6 179 aa5.72□□□□□ -1.49
VTI1A-207ENST00000489357 FAM30AQ9NZY2 134 aa5.72□□□□□ -1.49
VTI1A-207ENST00000489357 DYNC2H1Q8NCM8 4307 aaKnown RBP5.72□□□□□ -1.49
VTI1A-207ENST00000489357 ACYP1P07311 99 aa5.71□□□□□ -1.5
VTI1A-207ENST00000489357 SPAG11BQ08648 103 aa5.71□□□□□ -1.5
VTI1A-207ENST00000489357 LINC01556Q5JQF7 62 aa5.71□□□□□ -1.5
VTI1A-207ENST00000489357 LCE1DQ5T752 114 aa5.71□□□□□ -1.5
VTI1A-207ENST00000489357 CLPSL2Q6UWE3 100 aa5.71□□□□□ -1.5
VTI1A-207ENST00000489357 ENHOQ6UWT2 76 aa5.71□□□□□ -1.5
VTI1A-207ENST00000489357 C11orf45Q8TAV5 145 aa5.71□□□□□ -1.5
VTI1A-207ENST00000489357 CLEC2BQ92478 149 aa5.71□□□□□ -1.5
VTI1A-207ENST00000489357 TMEM126AQ9H061 195 aa5.71□□□□□ -1.5
VTI1A-207ENST00000489357 SNCGO76070 127 aa5.7□□□□□ -1.5
VTI1A-207ENST00000489357 Q6ZTC4 211 aa5.7□□□□□ -1.5
VTI1A-207ENST00000489357 NTN5Q8WTR8 489 aaPredicted RBP5.7□□□□□ -1.5
VTI1A-207ENST00000489357 KLK12Q9UKR0 248 aa5.7□□□□□ -1.5
VTI1A-207ENST00000489357 DEFB131BA0A096LNP1 70 aa5.69□□□□□ -1.5
VTI1A-207ENST00000489357 TRAV10A0A0B4J240 114 aa5.69□□□□□ -1.5
VTI1A-207ENST00000489357 DNAL4O96015 105 aa5.69□□□□□ -1.5
VTI1A-207ENST00000489357 INAFM2P0DMQ5 153 aa5.69□□□□□ -1.5
VTI1A-207ENST00000489357 SMIM11BQ8TCY0 68 aa5.69□□□□□ -1.5
VTI1A-207ENST00000489357 C2orf48Q96LS8 159 aa5.69□□□□□ -1.5
VTI1A-207ENST00000489357 TENM2Q9NT68 2774 aa5.69□□□□□ -1.5
VTI1A-207ENST00000489357 IGLV10-54A0A075B6I4 117 aa5.68□□□□□ -1.5
VTI1A-207ENST00000489357 H3BQ85 93 aa5.68□□□□□ -1.5
VTI1A-207ENST00000489357 STARD9Q9P2P6 4700 aa5.67□□□□□ -1.5
VTI1A-207ENST00000489357 TEX49A0A1B0GTD5 131 aa5.67□□□□□ -1.5
VTI1A-207ENST00000489357 DNAH10OSP0CZ25 163 aa5.67□□□□□ -1.5
VTI1A-207ENST00000489357 CASC10Q5T4H9 136 aa5.67□□□□□ -1.5
VTI1A-207ENST00000489357 BAALC-AS2P0C853 105 aa5.66□□□□□ -1.5
VTI1A-207ENST00000489357 ESRGQ1W209 222 aa5.66□□□□□ -1.5
VTI1A-207ENST00000489357 KRTAP26-1Q6PEX3 210 aa5.66□□□□□ -1.5
VTI1A-207ENST00000489357 WFDC10BQ8IUB3 73 aa5.66□□□□□ -1.5
VTI1A-207ENST00000489357 OR13C6PQ8NH95 151 aa5.66□□□□□ -1.5
VTI1A-207ENST00000489357 C1orf43Q9BWL3 253 aa5.66□□□□□ -1.5
VTI1A-207ENST00000489357 KMT2CQ8NEZ4 4911 aaKnown RBP5.66□□□□□ -1.5
VTI1A-207ENST00000489357 PLECQ15149 4684 aaKnown RBP5.66□□□□□ -1.5
VTI1A-207ENST00000489357 LINC00167Q96N53 147 aa5.65□□□□□ -1.5
VTI1A-207ENST00000489357 TRBV7-6A0A0J9YX20 115 aa5.64□□□□□ -1.51
VTI1A-207ENST00000489357 Q6Q795 121 aa5.64□□□□□ -1.51
VTI1A-207ENST00000489357 UNQ6190/PRO20217Q6UXQ8 127 aa5.64□□□□□ -1.51
VTI1A-207ENST00000489357 RMI2Q96E14 147 aa5.64□□□□□ -1.51
VTI1A-207ENST00000489357 FAM218AQ96MZ4 157 aa5.64□□□□□ -1.51
VTI1A-207ENST00000489357 LYSTQ99698 3801 aa5.63□□□□□ -1.51
VTI1A-207ENST00000489357 IGLV6-57P01721 117 aa5.63□□□□□ -1.51
VTI1A-207ENST00000489357 NANOS2P60321 138 aaKnown RBP5.63□□□□□ -1.51
VTI1A-207ENST00000489357 S100A7L2Q5SY68 101 aa5.63□□□□□ -1.51
VTI1A-207ENST00000489357 OBSCN-AS1Q96MR7 158 aa5.63□□□□□ -1.51
VTI1A-207ENST00000489357 CAMK2N2Q96S95 79 aa5.63□□□□□ -1.51
VTI1A-207ENST00000489357 UPK3BQ9BT76 320 aa5.63□□□□□ -1.51
VTI1A-207ENST00000489357 ORMDL1Q9P0S3 153 aa5.63□□□□□ -1.51
VTI1A-207ENST00000489357 DNAH1Q9P2D7 4330 aa5.63□□□□□ -1.51
VTI1A-207ENST00000489357 RYR3Q15413 4870 aa5.63□□□□□ -1.51
VTI1A-207ENST00000489357 NDUFC2-KCTD14E9PQ53 114 aa5.62□□□□□ -1.51
VTI1A-207ENST00000489357 JMJD7-PLA2G4BH0Y9G9 81 aa5.62□□□□□ -1.51
VTI1A-207ENST00000489357 TMEM256-PLSCR3K7ERE1 68 aa5.62□□□□□ -1.51
VTI1A-207ENST00000489357 XGP55808 180 aa5.62□□□□□ -1.51
VTI1A-207ENST00000489357 C6orf48Q9UBA6 75 aa5.62□□□□□ -1.51
VTI1A-207ENST00000489357 SACSQ9NZJ4 4579 aa5.61□□□□□ -1.51
VTI1A-207ENST00000489357 A0A087WYN8 130 aa5.61□□□□□ -1.51
VTI1A-207ENST00000489357 LECT2O14960 151 aa5.61□□□□□ -1.51
VTI1A-207ENST00000489357 C10orf25Q5T742 122 aa5.61□□□□□ -1.51
VTI1A-207ENST00000489357 SDIM1Q6ZPB5 146 aa5.61□□□□□ -1.51
VTI1A-207ENST00000489357 Q8N814 137 aa5.61□□□□□ -1.51
VTI1A-207ENST00000489357 C15orf56Q8N910 161 aa5.61□□□□□ -1.51
VTI1A-207ENST00000489357 IMUPQ9GZP8 106 aa5.61□□□□□ -1.51
VTI1A-207ENST00000489357 VPS13DQ5THJ4 4388 aa5.6□□□□□ -1.51
VTI1A-207ENST00000489357 NUPR2A6NF83 97 aa5.6□□□□□ -1.51
VTI1A-207ENST00000489357 TLX1NBP0CAT3 122 aa5.6□□□□□ -1.51
VTI1A-207ENST00000489357 C9orf116Q5BN46 136 aaPredicted RBP5.6□□□□□ -1.51
VTI1A-207ENST00000489357 C6orf223Q8N319 242 aa5.6□□□□□ -1.51
VTI1A-207ENST00000489357 KRTAP9-3Q9BYQ3 159 aa5.6□□□□□ -1.51
VTI1A-207ENST00000489357 M0R378 163 aa5.59□□□□□ -1.51
VTI1A-207ENST00000489357 LINC00575Q6W349 94 aa5.59□□□□□ -1.51
VTI1A-207ENST00000489357 C22orf24Q9Y442 160 aa5.59□□□□□ -1.51
VTI1A-207ENST00000489357 IGKV2D-24A0A075B6R9 120 aa5.58□□□□□ -1.52
VTI1A-207ENST00000489357 LCE6AA0A183 80 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms