RNA–Protein interactions for RNA: ENST00000489003.5

FDPS-213, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 2

Gene FDPS, Length 976 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-213ENST00000489003 KRTAP11-1Q8IUC1 163 aa9.4□□□□□ -0.9
FDPS-213ENST00000489003 IGKV2D-26A0A0A0MRZ7 120 aa9.39□□□□□ -0.91
FDPS-213ENST00000489003 LINC00587B1AMM8 73 aa9.39□□□□□ -0.91
FDPS-213ENST00000489003 M0QXV9 152 aa9.39□□□□□ -0.91
FDPS-213ENST00000489003 HNRNPA3P51991 378 aaKnown RBP9.39□□□□□ -0.91
FDPS-213ENST00000489003 PRR3P79522 188 aaKnown RBP9.38□□□□□ -0.91
FDPS-213ENST00000489003 ATOH7Q8N100 152 aa9.38□□□□□ -0.91
FDPS-213ENST00000489003 AKR1D1P51857 326 aa9.37□□□□□ -0.91
FDPS-213ENST00000489003 MIR7-3HGQ8N6C7 128 aa9.37□□□□□ -0.91
FDPS-213ENST00000489003 PSORS1C2Q9UIG4 136 aa9.37□□□□□ -0.91
FDPS-213ENST00000489003 IGLV5-37A0A075B6J1 123 aa9.36□□□□□ -0.91
FDPS-213ENST00000489003 LBHQ53QV2 105 aaPredicted RBP9.36□□□□□ -0.91
FDPS-213ENST00000489003 ANKRD39Q53RE8 183 aa9.36□□□□□ -0.91
FDPS-213ENST00000489003 Q8NDZ9 215 aa9.36□□□□□ -0.91
FDPS-213ENST00000489003 TP73-AS1Q9UF72 201 aa9.36□□□□□ -0.91
FDPS-213ENST00000489003 A0A0J9YXY3 114 aa9.35□□□□□ -0.91
FDPS-213ENST00000489003 VPREB1P12018 145 aa9.35□□□□□ -0.91
FDPS-213ENST00000489003 UBE2BP63146 152 aa9.35□□□□□ -0.91
FDPS-213ENST00000489003 MRPL55Q7Z7F7 128 aaKnown RBP9.35□□□□□ -0.91
FDPS-213ENST00000489003 LINC00167Q96N53 147 aa9.35□□□□□ -0.91
FDPS-213ENST00000489003 TTTY13Q9BZ97 58 aa9.34□□□□□ -0.91
FDPS-213ENST00000489003 FLG2Q5D862 2391 aaPredicted RBP9.33□□□□□ -0.92
FDPS-213ENST00000489003 RPL24P83731 157 aaKnown RBP9.33□□□□□ -0.92
FDPS-213ENST00000489003 SRSF9Q13242 221 aaKnown RBP eCLIP9.33□□□□□ -0.92
FDPS-213ENST00000489003 C1orf137Q5JT78 98 aa9.33□□□□□ -0.92
FDPS-213ENST00000489003 DAND5Q8N907 189 aa9.33□□□□□ -0.92
FDPS-213ENST00000489003 NKAPP1Q8N9T2 125 aa9.33□□□□□ -0.92
FDPS-213ENST00000489003 FAT3Q8TDW7 4589 aa9.32□□□□□ -0.92
FDPS-213ENST00000489003 SCGB1D1O95968 90 aa9.32□□□□□ -0.92
FDPS-213ENST00000489003 ADAMTSL4-AS1Q5T5F5 129 aa9.32□□□□□ -0.92
FDPS-213ENST00000489003 LOC107984156A0A0G2JMH3 177 aa9.31□□□□□ -0.92
FDPS-213ENST00000489003 GAGE10A6NGK3 116 aa9.31□□□□□ -0.92
FDPS-213ENST00000489003 RPL37AP8A6NKH3 93 aa9.31□□□□□ -0.92
FDPS-213ENST00000489003 ZNF815PA8K554 130 aa9.31□□□□□ -0.92
FDPS-213ENST00000489003 ARL17AQ8IVW1 177 aa9.31□□□□□ -0.92
FDPS-213ENST00000489003 BOD1L2Q8IYS8 172 aa9.3□□□□□ -0.92
FDPS-213ENST00000489003 LRP1Q07954 4544 aaKnown RBP9.3□□□□□ -0.92
FDPS-213ENST00000489003 IGLV7-43P04211 117 aa9.29□□□□□ -0.92
FDPS-213ENST00000489003 PCP2Q8IVA1 136 aa9.29□□□□□ -0.92
FDPS-213ENST00000489003 LITAFQ99732 161 aa9.29□□□□□ -0.92
FDPS-213ENST00000489003 MYCBP2O75592 4640 aa9.29□□□□□ -0.92
FDPS-213ENST00000489003 SPINK6Q6UWN8 80 aa9.28□□□□□ -0.92
FDPS-213ENST00000489003 IGLV1-50A0A075B6I6 118 aa9.27□□□□□ -0.93
FDPS-213ENST00000489003 M0R378 163 aa9.27□□□□□ -0.93
FDPS-213ENST00000489003 EIF4EBP3O60516 100 aaPredicted RBP9.27□□□□□ -0.93
FDPS-213ENST00000489003 TIMM17BO60830 172 aa9.27□□□□□ -0.93
FDPS-213ENST00000489003 SOSTDC1Q6X4U4 206 aa9.27□□□□□ -0.93
FDPS-213ENST00000489003 TMA7Q9Y2S6 64 aaKnown RBP9.27□□□□□ -0.93
FDPS-213ENST00000489003 HSBP1L1C9JCN9 74 aa9.26□□□□□ -0.93
FDPS-213ENST00000489003 NPC2P61916 151 aa9.25□□□□□ -0.93
FDPS-213ENST00000489003 IGKV2-28A0A075B6P5 120 aa9.24□□□□□ -0.93
FDPS-213ENST00000489003 IGKV2D-28P01615 120 aa9.24□□□□□ -0.93
FDPS-213ENST00000489003 KRTAP29-1A8MX34 341 aaPredicted RBP9.23□□□□□ -0.93
FDPS-213ENST00000489003 NCR3O14931 201 aa9.23□□□□□ -0.93
FDPS-213ENST00000489003 JOSD1Q15040 202 aaPredicted RBP9.23□□□□□ -0.93
FDPS-213ENST00000489003 SCGB1D4Q6XE38 83 aa9.23□□□□□ -0.93
FDPS-213ENST00000489003 LINC00308Q8TCZ7 52 aa9.23□□□□□ -0.93
FDPS-213ENST00000489003 MIEN1Q9BRT3 115 aa9.23□□□□□ -0.93
FDPS-213ENST00000489003 BCE1O60756 84 aa9.22□□□□□ -0.93
FDPS-213ENST00000489003 NDUFC2O95298 119 aa9.22□□□□□ -0.93
FDPS-213ENST00000489003 TMEM238C9JI98 176 aa9.21□□□□□ -0.94
FDPS-213ENST00000489003 ZNF861PO60384 105 aa9.21□□□□□ -0.94
FDPS-213ENST00000489003 OXTP01178 125 aa9.21□□□□□ -0.94
FDPS-213ENST00000489003 TRBV10-2A0A0K0K1G8 114 aa9.2□□□□□ -0.94
FDPS-213ENST00000489003 REG3GQ6UW15 175 aa9.2□□□□□ -0.94
FDPS-213ENST00000489003 DIRC1Q969H9 104 aa9.19□□□□□ -0.94
FDPS-213ENST00000489003 SPANXDQ9BXN6 97 aa9.19□□□□□ -0.94
FDPS-213ENST00000489003 TMEM126AQ9H061 195 aa9.19□□□□□ -0.94
FDPS-213ENST00000489003 SPANXCQ9NY87 97 aa9.19□□□□□ -0.94
FDPS-213ENST00000489003 TRBV10-3A0A0K0K1G6 114 aa9.18□□□□□ -0.94
FDPS-213ENST00000489003 H0Y9J4 135 aa9.17□□□□□ -0.94
FDPS-213ENST00000489003 KRTAP13-1Q8IUC0 172 aa9.17□□□□□ -0.94
FDPS-213ENST00000489003 KCNQ1DNQ9H478 68 aa9.17□□□□□ -0.94
FDPS-213ENST00000489003 SPANXB1Q9NS25 103 aaPredicted RBP9.17□□□□□ -0.94
FDPS-213ENST00000489003 J3QL48 77 aa9.16□□□□□ -0.94
FDPS-213ENST00000489003 COX8AP10176 69 aa9.16□□□□□ -0.94
FDPS-213ENST00000489003 RPL28P46779 137 aaKnown RBP9.16□□□□□ -0.94
FDPS-213ENST00000489003 Q6ZVH6 145 aa9.16□□□□□ -0.94
FDPS-213ENST00000489003 MUSTN1Q8IVN3 82 aa9.16□□□□□ -0.94
FDPS-213ENST00000489003 LINC01600Q96MT4 127 aa9.16□□□□□ -0.94
FDPS-213ENST00000489003 PRYO14603 147 aa9.15□□□□□ -0.94
FDPS-213ENST00000489003 IFITM1P13164 125 aa9.15□□□□□ -0.94
FDPS-213ENST00000489003 DDTP30046 118 aa9.15□□□□□ -0.94
FDPS-213ENST00000489003 PYY3Q5JQD4 70 aa9.15□□□□□ -0.94
FDPS-213ENST00000489003 FAM19A1Q7Z5A9 133 aa9.15□□□□□ -0.94
FDPS-213ENST00000489003 PAM16Q9Y3D7 125 aa9.15□□□□□ -0.94
FDPS-213ENST00000489003 DLEU1O43261 78 aa9.14□□□□□ -0.95
FDPS-213ENST00000489003 IGLV6-57P01721 117 aa9.14□□□□□ -0.95
FDPS-213ENST00000489003 SPRR1AP35321 89 aa9.14□□□□□ -0.95
FDPS-213ENST00000489003 UBE2AP49459 152 aa9.14□□□□□ -0.95
FDPS-213ENST00000489003 SPATA45Q537H7 98 aa9.14□□□□□ -0.95
FDPS-213ENST00000489003 S100A7L2Q5SY68 101 aa9.14□□□□□ -0.95
FDPS-213ENST00000489003 C14orf144Q96I85 54 aa9.14□□□□□ -0.95
FDPS-213ENST00000489003 VAMP8Q9BV40 100 aa9.14□□□□□ -0.95
FDPS-213ENST00000489003 PPDPFQ9H3Y8 114 aa9.14□□□□□ -0.95
FDPS-213ENST00000489003 PRLHP81277 87 aa9.13□□□□□ -0.95
FDPS-213ENST00000489003 KRTAP4-16G5E9R7 235 aaPredicted RBP9.12□□□□□ -0.95
FDPS-213ENST00000489003 MT1HL1P0DM35 61 aa9.12□□□□□ -0.95
FDPS-213ENST00000489003 LINC00518Q8N0U6 118 aa9.12□□□□□ -0.95
FDPS-213ENST00000489003 COPS9Q8WXC6 57 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 145.4 ms