RNA–Protein interactions for RNA: ENST00000488828.1

NUP98-212, Transcript of nucleoporin 98, humanhuman

TSL 2

Gene NUP98, Length 712 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-212ENST00000488828 PHF5AQ7RTV0 110 aaKnown RBP6.9□□□□□ -1.3
NUP98-212ENST00000488828 ZNF625Q96I27 306 aaPredicted RBP6.9□□□□□ -1.3
NUP98-212ENST00000488828 DNAH8Q96JB1 4490 aa6.89□□□□□ -1.31
NUP98-212ENST00000488828 FAT1Q14517 4588 aa6.88□□□□□ -1.31
NUP98-212ENST00000488828 TMEM223A0PJW6 202 aa6.88□□□□□ -1.31
NUP98-212ENST00000488828 PLNP26678 52 aa6.88□□□□□ -1.31
NUP98-212ENST00000488828 KRTAP10-4P60372 401 aaPredicted RBP6.88□□□□□ -1.31
NUP98-212ENST00000488828 UBE2BP63146 152 aa6.88□□□□□ -1.31
NUP98-212ENST00000488828 C9orf129Q5T035 196 aaKnown RBP6.88□□□□□ -1.31
NUP98-212ENST00000488828 PMCHL2Q9BQD1 86 aa6.88□□□□□ -1.31
NUP98-212ENST00000488828 M0QXV9 152 aa6.87□□□□□ -1.31
NUP98-212ENST00000488828 DPM2O94777 84 aa6.87□□□□□ -1.31
NUP98-212ENST00000488828 SCGB1D1O95968 90 aa6.87□□□□□ -1.31
NUP98-212ENST00000488828 PRR3P79522 188 aaKnown RBP6.87□□□□□ -1.31
NUP98-212ENST00000488828 FLG2Q5D862 2391 aaPredicted RBP6.87□□□□□ -1.31
NUP98-212ENST00000488828 LINC00158P58513 81 aa6.86□□□□□ -1.31
NUP98-212ENST00000488828 SFTA2Q6UW10 78 aa6.86□□□□□ -1.31
NUP98-212ENST00000488828 ERG28Q9UKR5 140 aa6.86□□□□□ -1.31
NUP98-212ENST00000488828 A0A0U1RRA0 63 aa6.85□□□□□ -1.31
NUP98-212ENST00000488828 IGKCP01834 107 aa6.85□□□□□ -1.31
NUP98-212ENST00000488828 HNRNPA3P51991 378 aaKnown RBP6.85□□□□□ -1.31
NUP98-212ENST00000488828 HERVK_113P61574 105 aa6.85□□□□□ -1.31
NUP98-212ENST00000488828 LBHQ53QV2 105 aaPredicted RBP6.85□□□□□ -1.31
NUP98-212ENST00000488828 C1orf137Q5JT78 98 aa6.85□□□□□ -1.31
NUP98-212ENST00000488828 COX17Q14061 63 aa6.84□□□□□ -1.31
NUP98-212ENST00000488828 SERTAD4-AS1Q5TG53 156 aa6.84□□□□□ -1.31
NUP98-212ENST00000488828 PSORS1C2Q9UIG4 136 aa6.84□□□□□ -1.31
NUP98-212ENST00000488828 C22orf24Q9Y442 160 aa6.84□□□□□ -1.31
NUP98-212ENST00000488828 MYMXA0A1B0GTQ4 84 aa6.83□□□□□ -1.32
NUP98-212ENST00000488828 SYS1-DBNDD2H3BUS1 97 aa6.83□□□□□ -1.32
NUP98-212ENST00000488828 KRTDAPP60985 99 aa6.83□□□□□ -1.32
NUP98-212ENST00000488828 MEIG1Q5JSS6 88 aa6.83□□□□□ -1.32
NUP98-212ENST00000488828 NKAPP1Q8N9T2 125 aa6.83□□□□□ -1.32
NUP98-212ENST00000488828 PLEKHB2Q96CS7 222 aa6.83□□□□□ -1.32
NUP98-212ENST00000488828 KRTAP4-11Q9BYQ6 195 aa6.83□□□□□ -1.32
NUP98-212ENST00000488828 LEPROTO15243 131 aa6.82□□□□□ -1.32
NUP98-212ENST00000488828 KRTAP7-1Q8IUC3 87 aa6.82□□□□□ -1.32
NUP98-212ENST00000488828 SND1-IT1Q9HBX3 110 aa6.82□□□□□ -1.32
NUP98-212ENST00000488828 NDUFA12Q9UI09 145 aa6.82□□□□□ -1.32
NUP98-212ENST00000488828 VPS13BQ7Z7G8 4022 aa6.81□□□□□ -1.32
NUP98-212ENST00000488828 PRYO14603 147 aa6.81□□□□□ -1.32
NUP98-212ENST00000488828 LGALS3P17931 250 aaKnown RBP6.81□□□□□ -1.32
NUP98-212ENST00000488828 HERV-K104P63124 156 aa6.81□□□□□ -1.32
NUP98-212ENST00000488828 COA6Q5JTJ3 125 aaKnown RBP6.81□□□□□ -1.32
NUP98-212ENST00000488828 PET117Q6UWS5 81 aa6.81□□□□□ -1.32
NUP98-212ENST00000488828 MRPL55Q7Z7F7 128 aaKnown RBP6.81□□□□□ -1.32
NUP98-212ENST00000488828 RPL37AP8A6NKH3 93 aa6.8□□□□□ -1.32
NUP98-212ENST00000488828 KRTAP29-1A8MX34 341 aaPredicted RBP6.8□□□□□ -1.32
NUP98-212ENST00000488828 LINC00587B1AMM8 73 aa6.8□□□□□ -1.32
NUP98-212ENST00000488828 J3QQQ9 107 aa6.8□□□□□ -1.32
NUP98-212ENST00000488828 OXTP01178 125 aa6.8□□□□□ -1.32
NUP98-212ENST00000488828 SMIM13P0DJ93 91 aa6.8□□□□□ -1.32
NUP98-212ENST00000488828 RPL24P83731 157 aaKnown RBP6.8□□□□□ -1.32
NUP98-212ENST00000488828 SPINK6Q6UWN8 80 aa6.8□□□□□ -1.32
NUP98-212ENST00000488828 KRTAP4-2Q9BYR5 136 aa6.8□□□□□ -1.32
NUP98-212ENST00000488828 S100A6P06703 90 aa6.79□□□□□ -1.32
NUP98-212ENST00000488828 C3orf79P0CE67 100 aa6.79□□□□□ -1.32
NUP98-212ENST00000488828 S100A2P29034 98 aa6.79□□□□□ -1.32
NUP98-212ENST00000488828 KRTAP11-1Q8IUC1 163 aa6.79□□□□□ -1.32
NUP98-212ENST00000488828 LINC00167Q96N53 147 aa6.79□□□□□ -1.32
NUP98-212ENST00000488828 C20orf202A1L168 122 aa6.78□□□□□ -1.32
NUP98-212ENST00000488828 IGLV7-43P04211 117 aa6.78□□□□□ -1.32
NUP98-212ENST00000488828 LINC01545Q5VT33 79 aa6.78□□□□□ -1.32
NUP98-212ENST00000488828 REG3GQ6UW15 175 aa6.78□□□□□ -1.32
NUP98-212ENST00000488828 TP73-AS1Q9UF72 201 aa6.78□□□□□ -1.32
NUP98-212ENST00000488828 DMBT1Q9UGM3 2413 aaPredicted RBP6.78□□□□□ -1.32
NUP98-212ENST00000488828 TSPEAR-AS2P59090 65 aa6.77□□□□□ -1.33
NUP98-212ENST00000488828 SRSF9Q13242 221 aaKnown RBP eCLIP6.77□□□□□ -1.33
NUP98-212ENST00000488828 MIR7-3HGQ8N6C7 128 aa6.77□□□□□ -1.33
NUP98-212ENST00000488828 NMUP48645 174 aa6.76□□□□□ -1.33
NUP98-212ENST00000488828 BOD1L2Q8IYS8 172 aa6.76□□□□□ -1.33
NUP98-212ENST00000488828 DIRC1Q969H9 104 aa6.76□□□□□ -1.33
NUP98-212ENST00000488828 IGKV2-28A0A075B6P5 120 aa6.75□□□□□ -1.33
NUP98-212ENST00000488828 E9PLD3 99 aa6.75□□□□□ -1.33
NUP98-212ENST00000488828 IGKV2D-28P01615 120 aa6.75□□□□□ -1.33
NUP98-212ENST00000488828 IGLV5-37A0A075B6J1 123 aa6.74□□□□□ -1.33
NUP98-212ENST00000488828 VPREB1P12018 145 aa6.74□□□□□ -1.33
NUP98-212ENST00000488828 DAND5Q8N907 189 aa6.74□□□□□ -1.33
NUP98-212ENST00000488828 MIEN1Q9BRT3 115 aa6.74□□□□□ -1.33
NUP98-212ENST00000488828 ATOH7Q8N100 152 aa6.73□□□□□ -1.33
NUP98-212ENST00000488828 HIST3H2BBQ8N257 126 aa6.73□□□□□ -1.33
NUP98-212ENST00000488828 MYCBP2O75592 4640 aa6.73□□□□□ -1.33
NUP98-212ENST00000488828 M0R378 163 aa6.72□□□□□ -1.33
NUP98-212ENST00000488828 BCE1O60756 84 aa6.72□□□□□ -1.33
NUP98-212ENST00000488828 RPL28P46779 137 aaKnown RBP6.72□□□□□ -1.33
NUP98-212ENST00000488828 UBE2AP49459 152 aa6.72□□□□□ -1.33
NUP98-212ENST00000488828 AKR1D1P51857 326 aa6.72□□□□□ -1.33
NUP98-212ENST00000488828 SNRPEP62304 92 aaKnown RBP6.72□□□□□ -1.33
NUP98-212ENST00000488828 IGLV1-50A0A075B6I6 118 aa6.71□□□□□ -1.34
NUP98-212ENST00000488828 A0A0J9YXY3 114 aa6.71□□□□□ -1.34
NUP98-212ENST00000488828 ZNF815PA8K554 130 aa6.71□□□□□ -1.34
NUP98-212ENST00000488828 NCR3O14931 201 aa6.71□□□□□ -1.34
NUP98-212ENST00000488828 ZNF861PO60384 105 aa6.71□□□□□ -1.34
NUP98-212ENST00000488828 NPC2P61916 151 aa6.71□□□□□ -1.34
NUP98-212ENST00000488828 Q8NDZ9 215 aa6.71□□□□□ -1.34
NUP98-212ENST00000488828 LINC01600Q96MT4 127 aa6.71□□□□□ -1.34
NUP98-212ENST00000488828 HIST1H2BLQ99880 126 aa6.71□□□□□ -1.34
NUP98-212ENST00000488828 TMEM238C9JI98 176 aa6.7□□□□□ -1.34
NUP98-212ENST00000488828 H0Y9J4 135 aa6.7□□□□□ -1.34
NUP98-212ENST00000488828 IGKV2D-26A0A0A0MRZ7 120 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms