RNA–Protein interactions for RNA: ENST00000488809.2

PTCH1-211, Transcript of patched 1, humanhuman

TSL 3

Gene PTCH1, Length 301 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-211ENST00000488809 S100A12P80511 92 aa3.63□□□□□ -1.83
PTCH1-211ENST00000488809 PRYO14603 147 aa3.62□□□□□ -1.83
PTCH1-211ENST00000488809 PMVKQ15126 192 aa3.62□□□□□ -1.83
PTCH1-211ENST00000488809 SSBP3-AS1Q7Z2R9 100 aa3.62□□□□□ -1.83
PTCH1-211ENST00000488809 Q8N377 158 aa3.62□□□□□ -1.83
PTCH1-211ENST00000488809 ETDCA0A1B0GVM5 59 aa3.61□□□□□ -1.83
PTCH1-211ENST00000488809 MT1HP80294 61 aa3.61□□□□□ -1.83
PTCH1-211ENST00000488809 ANAPC16Q96DE5 110 aa3.61□□□□□ -1.83
PTCH1-211ENST00000488809 CST9LQ9H4G1 147 aa3.61□□□□□ -1.83
PTCH1-211ENST00000488809 IGLV9-49A0A0B4J1Y8 123 aa3.6□□□□□ -1.83
PTCH1-211ENST00000488809 IGLV5-39A0A0G2JS06 123 aa3.6□□□□□ -1.83
PTCH1-211ENST00000488809 C9JQL5 133 aa3.6□□□□□ -1.83
PTCH1-211ENST00000488809 M0R2T5 61 aa3.6□□□□□ -1.83
PTCH1-211ENST00000488809 ATP6V1G1O75348 118 aa3.6□□□□□ -1.83
PTCH1-211ENST00000488809 MT-ND4LP03901 98 aa3.6□□□□□ -1.83
PTCH1-211ENST00000488809 MOBPQ13875 183 aa3.6□□□□□ -1.83
PTCH1-211ENST00000488809 LINC00483Q53H64 154 aa3.6□□□□□ -1.83
PTCH1-211ENST00000488809 LCE2CQ5TA81 110 aa3.6□□□□□ -1.83
PTCH1-211ENST00000488809 SMCR5Q8TEV8 140 aa3.6□□□□□ -1.83
PTCH1-211ENST00000488809 IGLV8-61A0A075B6I0 122 aa3.59□□□□□ -1.83
PTCH1-211ENST00000488809 ADCYAP1P18509 176 aa3.59□□□□□ -1.83
PTCH1-211ENST00000488809 LINC00158P58513 81 aa3.59□□□□□ -1.83
PTCH1-211ENST00000488809 GAGE2AQ6NT46 116 aa3.59□□□□□ -1.83
PTCH1-211ENST00000488809 ZNF625Q96I27 306 aaPredicted RBP3.59□□□□□ -1.83
PTCH1-211ENST00000488809 SMCO4Q9NRQ5 59 aa3.59□□□□□ -1.83
PTCH1-211ENST00000488809 IGLC3P0DOY3 106 aa3.58□□□□□ -1.84
PTCH1-211ENST00000488809 LORP23490 312 aaPredicted RBP3.58□□□□□ -1.84
PTCH1-211ENST00000488809 SPRR1AP35321 89 aa3.58□□□□□ -1.84
PTCH1-211ENST00000488809 NDUFA6P56556 154 aa3.58□□□□□ -1.84
PTCH1-211ENST00000488809 KRTAP10-6P60371 365 aaPredicted RBP3.58□□□□□ -1.84
PTCH1-211ENST00000488809 ZNF22P17026 224 aaPredicted RBP3.57□□□□□ -1.84
PTCH1-211ENST00000488809 PCOTHQ58A44 107 aa3.57□□□□□ -1.84
PTCH1-211ENST00000488809 C9orf153Q5TBE3 101 aa3.57□□□□□ -1.84
PTCH1-211ENST00000488809 COX6B2Q6YFQ2 88 aa3.57□□□□□ -1.84
PTCH1-211ENST00000488809 FA2HQ7L5A8 372 aa3.57□□□□□ -1.84
PTCH1-211ENST00000488809 Q8NDZ9 215 aa3.57□□□□□ -1.84
PTCH1-211ENST00000488809 LIMD2Q9BT23 127 aa3.57□□□□□ -1.84
PTCH1-211ENST00000488809 KCNQ1DNQ9H478 68 aa3.57□□□□□ -1.84
PTCH1-211ENST00000488809 TRAV9-1A0A075B6T8 112 aa3.56□□□□□ -1.84
PTCH1-211ENST00000488809 LINC01546A6NGU7 62 aa3.56□□□□□ -1.84
PTCH1-211ENST00000488809 KRTAP9-7A8MTY7 169 aa3.56□□□□□ -1.84
PTCH1-211ENST00000488809 NCR3O14931 201 aa3.56□□□□□ -1.84
PTCH1-211ENST00000488809 KRTAP19-2Q3LHN2 52 aa3.56□□□□□ -1.84
PTCH1-211ENST00000488809 KIAA1644Q3SXP7 199 aa3.56□□□□□ -1.84
PTCH1-211ENST00000488809 TMEM170BQ5T4T1 132 aa3.56□□□□□ -1.84
PTCH1-211ENST00000488809 BOD1L2Q8IYS8 172 aa3.56□□□□□ -1.84
PTCH1-211ENST00000488809 A0A0U1RRA0 63 aa3.55□□□□□ -1.84
PTCH1-211ENST00000488809 LINC00587B1AMM8 73 aa3.55□□□□□ -1.84
PTCH1-211ENST00000488809 KRTAP4-16G5E9R7 235 aaPredicted RBP3.55□□□□□ -1.84
PTCH1-211ENST00000488809 JOSD1Q15040 202 aaPredicted RBP3.55□□□□□ -1.84
PTCH1-211ENST00000488809 MEIG1Q5JSS6 88 aa3.55□□□□□ -1.84
PTCH1-211ENST00000488809 hCG_2014768A0A024R1R8 64 aa3.54□□□□□ -1.84
PTCH1-211ENST00000488809 TRBV10-3A0A0K0K1G6 114 aa3.54□□□□□ -1.84
PTCH1-211ENST00000488809 B5MCH6 92 aa3.54□□□□□ -1.84
PTCH1-211ENST00000488809 COX19Q49B96 90 aa3.54□□□□□ -1.84
PTCH1-211ENST00000488809 MAP1LC3CQ9BXW4 147 aa3.54□□□□□ -1.84
PTCH1-211ENST00000488809 FLGP20930 4061 aaPredicted RBP3.54□□□□□ -1.84
PTCH1-211ENST00000488809 C9orf92A6NGG3 77 aa3.53□□□□□ -1.84
PTCH1-211ENST00000488809 SMIM13P0DJ93 91 aa3.53□□□□□ -1.84
PTCH1-211ENST00000488809 S100PP25815 95 aa3.53□□□□□ -1.84
PTCH1-211ENST00000488809 HERV-K104P63124 156 aa3.53□□□□□ -1.84
PTCH1-211ENST00000488809 SLC25A34Q6PIV7 304 aa3.53□□□□□ -1.84
PTCH1-211ENST00000488809 Q6ZRX8 168 aa3.53□□□□□ -1.84
PTCH1-211ENST00000488809 MIR7-3HGQ8N6C7 128 aa3.53□□□□□ -1.84
PTCH1-211ENST00000488809 TRBV10-2A0A0K0K1G8 114 aa3.52□□□□□ -1.85
PTCH1-211ENST00000488809 C5orf52A6NGY3 159 aa3.52□□□□□ -1.85
PTCH1-211ENST00000488809 C11orf86A6NJI1 115 aa3.52□□□□□ -1.85
PTCH1-211ENST00000488809 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.52□□□□□ -1.85
PTCH1-211ENST00000488809 ERC2-IT1O76042 136 aa3.52□□□□□ -1.85
PTCH1-211ENST00000488809 IGLV6-57P01721 117 aa3.52□□□□□ -1.85
PTCH1-211ENST00000488809 HBDP02042 147 aa3.52□□□□□ -1.85
PTCH1-211ENST00000488809 DDTP30046 118 aa3.52□□□□□ -1.85
PTCH1-211ENST00000488809 BAGE3Q86Y29 109 aa3.52□□□□□ -1.85
PTCH1-211ENST00000488809 HINT1P49773 126 aaPredicted RBP3.51□□□□□ -1.85
PTCH1-211ENST00000488809 S100A7L2Q5SY68 101 aa3.51□□□□□ -1.85
PTCH1-211ENST00000488809 Q9BRP9 147 aa3.51□□□□□ -1.85
PTCH1-211ENST00000488809 MIEN1Q9BRT3 115 aa3.51□□□□□ -1.85
PTCH1-211ENST00000488809 CBY1Q9Y3M2 126 aa3.51□□□□□ -1.85
PTCH1-211ENST00000488809 CHTOPQ9Y3Y2 248 aaKnown RBP3.51□□□□□ -1.85
PTCH1-211ENST00000488809 MYMXA0A1B0GTQ4 84 aa3.5□□□□□ -1.85
PTCH1-211ENST00000488809 TMEM223A0PJW6 202 aa3.5□□□□□ -1.85
PTCH1-211ENST00000488809 LINC00614P0C842 121 aa3.5□□□□□ -1.85
PTCH1-211ENST00000488809 FABP9Q0Z7S8 132 aa3.5□□□□□ -1.85
PTCH1-211ENST00000488809 COMMD7Q86VX2 200 aa3.5□□□□□ -1.85
PTCH1-211ENST00000488809 SPANXB1Q9NS25 103 aaPredicted RBP3.5□□□□□ -1.85
PTCH1-211ENST00000488809 TRAV23DV6A0A075B6W5 121 aa3.49□□□□□ -1.85
PTCH1-211ENST00000488809 CFC1P0CG37 223 aa3.49□□□□□ -1.85
PTCH1-211ENST00000488809 HRCT1Q6UXD1 115 aa3.49□□□□□ -1.85
PTCH1-211ENST00000488809 SEC11CQ9BY50 192 aa3.49□□□□□ -1.85
PTCH1-211ENST00000488809 A0A096LNJ9 63 aa3.48□□□□□ -1.85
PTCH1-211ENST00000488809 RPL37P61927 97 aaKnown RBP3.48□□□□□ -1.85
PTCH1-211ENST00000488809 IFITM2Q01629 132 aa3.48□□□□□ -1.85
PTCH1-211ENST00000488809 LAMTOR3Q9UHA4 124 aa3.48□□□□□ -1.85
PTCH1-211ENST00000488809 TRAV12-1A0A0B4J245 112 aa3.47□□□□□ -1.85
PTCH1-211ENST00000488809 LOC107984156A0A0G2JMH3 177 aa3.47□□□□□ -1.85
PTCH1-211ENST00000488809 ZNF73O43830 326 aaPredicted RBP3.47□□□□□ -1.85
PTCH1-211ENST00000488809 NDUFC2O95298 119 aa3.47□□□□□ -1.85
PTCH1-211ENST00000488809 CD164Q04900 197 aa3.47□□□□□ -1.85
PTCH1-211ENST00000488809 PMCHL1Q16048 86 aa3.47□□□□□ -1.85
PTCH1-211ENST00000488809 ARL17AQ8IVW1 177 aa3.47□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms