RNA–Protein interactions for RNA: ENST00000488631.1

PDPN-206, Transcript of podoplanin, humanhuman

TSL 3

Gene PDPN, Length 794 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-206ENST00000488631 C9orf129Q5T035 196 aaKnown RBP6.14□□□□□ -1.43
PDPN-206ENST00000488631 SFTA2Q6UW10 78 aa6.14□□□□□ -1.43
PDPN-206ENST00000488631 LINC00518Q8N0U6 118 aa6.14□□□□□ -1.43
PDPN-206ENST00000488631 NKAPP1Q8N9T2 125 aa6.14□□□□□ -1.43
PDPN-206ENST00000488631 ERG28Q9UKR5 140 aa6.14□□□□□ -1.43
PDPN-206ENST00000488631 IGLV5-39A0A0G2JS06 123 aa6.13□□□□□ -1.43
PDPN-206ENST00000488631 TMEM223A0PJW6 202 aa6.13□□□□□ -1.43
PDPN-206ENST00000488631 SMIM6P0DI80 62 aa6.13□□□□□ -1.43
PDPN-206ENST00000488631 ODF1Q14990 250 aa6.13□□□□□ -1.43
PDPN-206ENST00000488631 PSORS1C2Q9UIG4 136 aa6.13□□□□□ -1.43
PDPN-206ENST00000488631 DMBT1Q9UGM3 2413 aaPredicted RBP6.13□□□□□ -1.43
PDPN-206ENST00000488631 GAGE10A6NGK3 116 aa6.12□□□□□ -1.43
PDPN-206ENST00000488631 IGKCP01834 107 aa6.12□□□□□ -1.43
PDPN-206ENST00000488631 HNRNPA3P51991 378 aaKnown RBP6.12□□□□□ -1.43
PDPN-206ENST00000488631 SERTAD4-AS1Q5TG53 156 aa6.12□□□□□ -1.43
PDPN-206ENST00000488631 C22orf24Q9Y442 160 aa6.12□□□□□ -1.43
PDPN-206ENST00000488631 MYMXA0A1B0GTQ4 84 aa6.11□□□□□ -1.43
PDPN-206ENST00000488631 LGALS3P17931 250 aaKnown RBP6.11□□□□□ -1.43
PDPN-206ENST00000488631 AKR1D1P51857 326 aa6.11□□□□□ -1.43
PDPN-206ENST00000488631 KRTAP10-4P60372 401 aaPredicted RBP6.11□□□□□ -1.43
PDPN-206ENST00000488631 KRTDAPP60985 99 aa6.11□□□□□ -1.43
PDPN-206ENST00000488631 OXTP01178 125 aa6.1□□□□□ -1.43
PDPN-206ENST00000488631 RPL24P83731 157 aaKnown RBP6.1□□□□□ -1.43
PDPN-206ENST00000488631 COX17Q14061 63 aa6.1□□□□□ -1.43
PDPN-206ENST00000488631 REG3GQ6UW15 175 aa6.1□□□□□ -1.43
PDPN-206ENST00000488631 SPINK6Q6UWN8 80 aa6.1□□□□□ -1.43
PDPN-206ENST00000488631 MRPL55Q7Z7F7 128 aaKnown RBP6.1□□□□□ -1.43
PDPN-206ENST00000488631 PLEKHB2Q96CS7 222 aa6.1□□□□□ -1.43
PDPN-206ENST00000488631 NDUFA12Q9UI09 145 aa6.1□□□□□ -1.43
PDPN-206ENST00000488631 RPL37AP8A6NKH3 93 aa6.09□□□□□ -1.43
PDPN-206ENST00000488631 LINC00587B1AMM8 73 aa6.09□□□□□ -1.43
PDPN-206ENST00000488631 SYS1-DBNDD2H3BUS1 97 aa6.09□□□□□ -1.43
PDPN-206ENST00000488631 SMIM13P0DJ93 91 aa6.09□□□□□ -1.43
PDPN-206ENST00000488631 HERV-K104P63124 156 aa6.09□□□□□ -1.43
PDPN-206ENST00000488631 SND1-IT1Q9HBX3 110 aa6.09□□□□□ -1.43
PDPN-206ENST00000488631 FLG2Q5D862 2391 aaPredicted RBP6.08□□□□□ -1.44
PDPN-206ENST00000488631 C20orf202A1L168 122 aa6.08□□□□□ -1.44
PDPN-206ENST00000488631 KRTAP29-1A8MX34 341 aaPredicted RBP6.08□□□□□ -1.44
PDPN-206ENST00000488631 LEPROTO15243 131 aa6.08□□□□□ -1.44
PDPN-206ENST00000488631 S100A2P29034 98 aa6.08□□□□□ -1.44
PDPN-206ENST00000488631 C12orf57Q99622 126 aa6.08□□□□□ -1.44
PDPN-206ENST00000488631 VPS13BQ7Z7G8 4022 aa6.08□□□□□ -1.44
PDPN-206ENST00000488631 HERC1Q15751 4861 aa6.07□□□□□ -1.44
PDPN-206ENST00000488631 J3QQQ9 107 aa6.07□□□□□ -1.44
PDPN-206ENST00000488631 IGLV7-43P04211 117 aa6.07□□□□□ -1.44
PDPN-206ENST00000488631 CTAG1AP78358 180 aa6.07□□□□□ -1.44
PDPN-206ENST00000488631 PET117Q6UWS5 81 aa6.07□□□□□ -1.44
PDPN-206ENST00000488631 DIRC1Q969H9 104 aa6.07□□□□□ -1.44
PDPN-206ENST00000488631 IGKV2-28A0A075B6P5 120 aa6.06□□□□□ -1.44
PDPN-206ENST00000488631 KRTAP9-7A8MTY7 169 aa6.06□□□□□ -1.44
PDPN-206ENST00000488631 IGKV2D-28P01615 120 aa6.06□□□□□ -1.44
PDPN-206ENST00000488631 KRTAP7-1Q8IUC3 87 aa6.06□□□□□ -1.44
PDPN-206ENST00000488631 BOD1L2Q8IYS8 172 aa6.06□□□□□ -1.44
PDPN-206ENST00000488631 MIR7-3HGQ8N6C7 128 aa6.06□□□□□ -1.44
PDPN-206ENST00000488631 LINC00167Q96N53 147 aa6.06□□□□□ -1.44
PDPN-206ENST00000488631 MIEN1Q9BRT3 115 aa6.06□□□□□ -1.44
PDPN-206ENST00000488631 SRRM2Q9UQ35 2752 aaKnown RBP6.05□□□□□ -1.44
PDPN-206ENST00000488631 UBE2AP49459 152 aa6.05□□□□□ -1.44
PDPN-206ENST00000488631 KRTAP11-1Q8IUC1 163 aa6.05□□□□□ -1.44
PDPN-206ENST00000488631 KRTAP4-9Q9BYQ8 210 aa6.05□□□□□ -1.44
PDPN-206ENST00000488631 TP73-AS1Q9UF72 201 aa6.05□□□□□ -1.44
PDPN-206ENST00000488631 PLA2G2DQ9UNK4 145 aa6.05□□□□□ -1.44
PDPN-206ENST00000488631 C3orf79P0CE67 100 aa6.04□□□□□ -1.44
PDPN-206ENST00000488631 NMUP48645 174 aa6.04□□□□□ -1.44
PDPN-206ENST00000488631 PCP4L1A6NKN8 68 aa6.03□□□□□ -1.44
PDPN-206ENST00000488631 NCR3O14931 201 aa6.03□□□□□ -1.44
PDPN-206ENST00000488631 RPL28P46779 137 aaKnown RBP6.03□□□□□ -1.44
PDPN-206ENST00000488631 TSPEAR-AS2P59090 65 aa6.03□□□□□ -1.44
PDPN-206ENST00000488631 COA6Q5JTJ3 125 aaKnown RBP6.03□□□□□ -1.44
PDPN-206ENST00000488631 LINC01545Q5VT33 79 aa6.03□□□□□ -1.44
PDPN-206ENST00000488631 DAND5Q8N907 189 aa6.03□□□□□ -1.44
PDPN-206ENST00000488631 C5orf52A6NGY3 159 aa6.02□□□□□ -1.45
PDPN-206ENST00000488631 E9PLD3 99 aa6.02□□□□□ -1.45
PDPN-206ENST00000488631 BCE1O60756 84 aa6.02□□□□□ -1.45
PDPN-206ENST00000488631 NPC2P61916 151 aa6.02□□□□□ -1.45
PDPN-206ENST00000488631 SRSF9Q13242 221 aaKnown RBP eCLIP6.02□□□□□ -1.45
PDPN-206ENST00000488631 FAM19A1Q7Z5A9 133 aa6.02□□□□□ -1.45
PDPN-206ENST00000488631 IGLV5-37A0A075B6J1 123 aa6.01□□□□□ -1.45
PDPN-206ENST00000488631 M0R378 163 aa6.01□□□□□ -1.45
PDPN-206ENST00000488631 ZNF861PO60384 105 aa6.01□□□□□ -1.45
PDPN-206ENST00000488631 VPREB1P12018 145 aa6.01□□□□□ -1.45
PDPN-206ENST00000488631 ATOH7Q8N100 152 aa6.01□□□□□ -1.45
PDPN-206ENST00000488631 ZNF815PA8K554 130 aa6□□□□□ -1.45
PDPN-206ENST00000488631 HSBP1L1C9JCN9 74 aa6□□□□□ -1.45
PDPN-206ENST00000488631 H0Y9J4 135 aa6□□□□□ -1.45
PDPN-206ENST00000488631 ANKRD39Q53RE8 183 aa6□□□□□ -1.45
PDPN-206ENST00000488631 SCGB1D4Q6XE38 83 aa6□□□□□ -1.45
PDPN-206ENST00000488631 TMEM238C9JI98 176 aa5.99□□□□□ -1.45
PDPN-206ENST00000488631 TSTD3H0UI37 97 aa5.99□□□□□ -1.45
PDPN-206ENST00000488631 SNRPEP62304 92 aaKnown RBP5.99□□□□□ -1.45
PDPN-206ENST00000488631 S100A7L2Q5SY68 101 aa5.99□□□□□ -1.45
PDPN-206ENST00000488631 LINC01600Q96MT4 127 aa5.99□□□□□ -1.45
PDPN-206ENST00000488631 IGLV1-50A0A075B6I6 118 aa5.98□□□□□ -1.45
PDPN-206ENST00000488631 A0A0J9YXY3 114 aa5.98□□□□□ -1.45
PDPN-206ENST00000488631 PRLHP81277 87 aa5.98□□□□□ -1.45
PDPN-206ENST00000488631 TMEM126AQ9H061 195 aa5.98□□□□□ -1.45
PDPN-206ENST00000488631 SCGB1D1O95968 90 aa5.97□□□□□ -1.45
PDPN-206ENST00000488631 HIST3H2BBQ8N257 126 aa5.97□□□□□ -1.45
PDPN-206ENST00000488631 HIST1H2BLQ99880 126 aa5.97□□□□□ -1.45
PDPN-206ENST00000488631 MYCBP2O75592 4640 aa5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms