RNA–Protein interactions for RNA: ENST00000488463.5

COL9A2-208, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 5

Gene COL9A2, Length 1,005 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-208ENST00000488463 TMEM223A0PJW6 202 aa8.69□□□□□ -1.02
COL9A2-208ENST00000488463 M0QXV9 152 aa8.69□□□□□ -1.02
COL9A2-208ENST00000488463 PLEKHB2Q96CS7 222 aa8.69□□□□□ -1.02
COL9A2-208ENST00000488463 LINC01600Q96MT4 127 aa8.69□□□□□ -1.02
COL9A2-208ENST00000488463 XAGE1AQ9HD64 81 aa8.69□□□□□ -1.02
COL9A2-208ENST00000488463 S100A12P80511 92 aa8.68□□□□□ -1.02
COL9A2-208ENST00000488463 SFTA2Q6UW10 78 aa8.68□□□□□ -1.02
COL9A2-208ENST00000488463 LEPROTO15243 131 aa8.67□□□□□ -1.02
COL9A2-208ENST00000488463 C1orf137Q5JT78 98 aa8.67□□□□□ -1.02
COL9A2-208ENST00000488463 ATOH7Q8N100 152 aa8.67□□□□□ -1.02
COL9A2-208ENST00000488463 LGALS3P17931 250 aaKnown RBP8.66□□□□□ -1.02
COL9A2-208ENST00000488463 VAMP8Q9BV40 100 aa8.66□□□□□ -1.02
COL9A2-208ENST00000488463 C22orf24Q9Y442 160 aa8.66□□□□□ -1.02
COL9A2-208ENST00000488463 LOC105371267A0A1B0GV96 52 aa8.65□□□□□ -1.02
COL9A2-208ENST00000488463 E9PLD3 99 aa8.65□□□□□ -1.02
COL9A2-208ENST00000488463 IGLV7-43P04211 117 aa8.65□□□□□ -1.02
COL9A2-208ENST00000488463 KRTAP10-8P60410 259 aa8.65□□□□□ -1.02
COL9A2-208ENST00000488463 ZNF625Q96I27 306 aaPredicted RBP8.64□□□□□ -1.03
COL9A2-208ENST00000488463 PLA2G2DQ9UNK4 145 aa8.64□□□□□ -1.03
COL9A2-208ENST00000488463 MYMXA0A1B0GTQ4 84 aa8.63□□□□□ -1.03
COL9A2-208ENST00000488463 LINC00587B1AMM8 73 aa8.63□□□□□ -1.03
COL9A2-208ENST00000488463 J3QQQ9 107 aa8.63□□□□□ -1.03
COL9A2-208ENST00000488463 NMUP48645 174 aa8.63□□□□□ -1.03
COL9A2-208ENST00000488463 TP73-AS1Q9UF72 201 aa8.63□□□□□ -1.03
COL9A2-208ENST00000488463 SMIM6P0DI80 62 aa8.62□□□□□ -1.03
COL9A2-208ENST00000488463 PYY3Q5JQD4 70 aa8.62□□□□□ -1.03
COL9A2-208ENST00000488463 REG3GQ6UW15 175 aa8.62□□□□□ -1.03
COL9A2-208ENST00000488463 IGLV5-37A0A075B6J1 123 aa8.61□□□□□ -1.03
COL9A2-208ENST00000488463 HERV-K104P63124 156 aa8.61□□□□□ -1.03
COL9A2-208ENST00000488463 UBE2BP63146 152 aa8.61□□□□□ -1.03
COL9A2-208ENST00000488463 MRPL55Q7Z7F7 128 aaKnown RBP8.6□□□□□ -1.03
COL9A2-208ENST00000488463 NDUFA12Q9UI09 145 aa8.6□□□□□ -1.03
COL9A2-208ENST00000488463 ERG28Q9UKR5 140 aa8.6□□□□□ -1.03
COL9A2-208ENST00000488463 SPATA45Q537H7 98 aa8.59□□□□□ -1.03
COL9A2-208ENST00000488463 PAM16Q9Y3D7 125 aa8.59□□□□□ -1.03
COL9A2-208ENST00000488463 H0Y9J4 135 aa8.58□□□□□ -1.04
COL9A2-208ENST00000488463 PFN2P35080 140 aa8.58□□□□□ -1.04
COL9A2-208ENST00000488463 COX17Q14061 63 aa8.58□□□□□ -1.04
COL9A2-208ENST00000488463 LBHQ53QV2 105 aaPredicted RBP8.58□□□□□ -1.04
COL9A2-208ENST00000488463 Q8NDZ9 215 aa8.58□□□□□ -1.04
COL9A2-208ENST00000488463 DIRC1Q969H9 104 aa8.58□□□□□ -1.04
COL9A2-208ENST00000488463 LINC00167Q96N53 147 aa8.58□□□□□ -1.04
COL9A2-208ENST00000488463 SND1-IT1Q9HBX3 110 aa8.58□□□□□ -1.04
COL9A2-208ENST00000488463 LRP2P98164 4655 aa8.57□□□□□ -1.04
COL9A2-208ENST00000488463 ZNF815PA8K554 130 aa8.57□□□□□ -1.04
COL9A2-208ENST00000488463 KRTAP1-4P0C5Y4 121 aa8.57□□□□□ -1.04
COL9A2-208ENST00000488463 ANKRD39Q53RE8 183 aa8.57□□□□□ -1.04
COL9A2-208ENST00000488463 VPREB1P12018 145 aa8.56□□□□□ -1.04
COL9A2-208ENST00000488463 MEIG1Q5JSS6 88 aa8.56□□□□□ -1.04
COL9A2-208ENST00000488463 SCGB1D4Q6XE38 83 aa8.56□□□□□ -1.04
COL9A2-208ENST00000488463 IGKV2D-26A0A0A0MRZ7 120 aa8.54□□□□□ -1.04
COL9A2-208ENST00000488463 RPL37AP8A6NKH3 93 aa8.54□□□□□ -1.04
COL9A2-208ENST00000488463 ZNF861PO60384 105 aa8.54□□□□□ -1.04
COL9A2-208ENST00000488463 COX8AP10176 69 aa8.54□□□□□ -1.04
COL9A2-208ENST00000488463 SLC25A34Q6PIV7 304 aa8.54□□□□□ -1.04
COL9A2-208ENST00000488463 GAGE10A6NGK3 116 aa8.53□□□□□ -1.04
COL9A2-208ENST00000488463 LINC00158P58513 81 aa8.53□□□□□ -1.04
COL9A2-208ENST00000488463 TSPEAR-AS2P59090 65 aa8.53□□□□□ -1.04
COL9A2-208ENST00000488463 KRTAP13-1Q8IUC0 172 aa8.53□□□□□ -1.04
COL9A2-208ENST00000488463 COPS9Q8WXC6 57 aa8.53□□□□□ -1.04
COL9A2-208ENST00000488463 C12orf57Q99622 126 aa8.53□□□□□ -1.04
COL9A2-208ENST00000488463 DLEU1O43261 78 aa8.52□□□□□ -1.05
COL9A2-208ENST00000488463 BCE1O60756 84 aa8.52□□□□□ -1.05
COL9A2-208ENST00000488463 TMEM238C9JI98 176 aa8.51□□□□□ -1.05
COL9A2-208ENST00000488463 PCP2Q8IVA1 136 aa8.51□□□□□ -1.05
COL9A2-208ENST00000488463 PRR26Q8N8Z3 221 aa8.51□□□□□ -1.05
COL9A2-208ENST00000488463 NKAPP1Q8N9T2 125 aa8.51□□□□□ -1.05
COL9A2-208ENST00000488463 C14orf144Q96I85 54 aa8.51□□□□□ -1.05
COL9A2-208ENST00000488463 IGLV1-50A0A075B6I6 118 aa8.5□□□□□ -1.05
COL9A2-208ENST00000488463 TIMM17BO60830 172 aa8.5□□□□□ -1.05
COL9A2-208ENST00000488463 SMIM13P0DJ93 91 aa8.5□□□□□ -1.05
COL9A2-208ENST00000488463 BOD1L2Q8IYS8 172 aa8.5□□□□□ -1.05
COL9A2-208ENST00000488463 UQCR10Q9UDW1 63 aa8.5□□□□□ -1.05
COL9A2-208ENST00000488463 A0A0J9YXY3 114 aa8.49□□□□□ -1.05
COL9A2-208ENST00000488463 A0A0U1RRA0 63 aa8.49□□□□□ -1.05
COL9A2-208ENST00000488463 TSTD3H0UI37 97 aa8.49□□□□□ -1.05
COL9A2-208ENST00000488463 IGKV2-28A0A075B6P5 120 aa8.48□□□□□ -1.05
COL9A2-208ENST00000488463 IGKV2D-28P01615 120 aa8.48□□□□□ -1.05
COL9A2-208ENST00000488463 RPL24P83731 157 aaKnown RBP8.48□□□□□ -1.05
COL9A2-208ENST00000488463 Q6ZVH6 145 aa8.48□□□□□ -1.05
COL9A2-208ENST00000488463 LINC00518Q8N0U6 118 aa8.48□□□□□ -1.05
COL9A2-208ENST00000488463 MIEN1Q9BRT3 115 aa8.48□□□□□ -1.05
COL9A2-208ENST00000488463 TTTY13Q9BZ97 58 aa8.48□□□□□ -1.05
COL9A2-208ENST00000488463 RPL28P46779 137 aaKnown RBP8.47□□□□□ -1.05
COL9A2-208ENST00000488463 MIR7-3HGQ8N6C7 128 aa8.46□□□□□ -1.06
COL9A2-208ENST00000488463 M0R378 163 aa8.45□□□□□ -1.06
COL9A2-208ENST00000488463 HIST1H4GQ99525 98 aa8.45□□□□□ -1.06
COL9A2-208ENST00000488463 TMEM126AQ9H061 195 aa8.45□□□□□ -1.06
COL9A2-208ENST00000488463 HIGD1BQ9P298 99 aa8.45□□□□□ -1.06
COL9A2-208ENST00000488463 LOC107984156A0A0G2JMH3 177 aa8.44□□□□□ -1.06
COL9A2-208ENST00000488463 IFITM1P13164 125 aa8.44□□□□□ -1.06
COL9A2-208ENST00000488463 ARL17AQ8IVW1 177 aa8.44□□□□□ -1.06
COL9A2-208ENST00000488463 PRO1933Q9H354 126 aa8.44□□□□□ -1.06
COL9A2-208ENST00000488463 LPAP08519 4548 aa8.44□□□□□ -1.06
COL9A2-208ENST00000488463 RNF213Q63HN8 5207 aa8.43□□□□□ -1.06
COL9A2-208ENST00000488463 SPANXDQ9BXN6 97 aa8.43□□□□□ -1.06
COL9A2-208ENST00000488463 SPANXB1Q9NS25 103 aaPredicted RBP8.43□□□□□ -1.06
COL9A2-208ENST00000488463 SPANXCQ9NY87 97 aa8.43□□□□□ -1.06
COL9A2-208ENST00000488463 A0A087X002 238 aa8.42□□□□□ -1.06
COL9A2-208ENST00000488463 TAL2Q16559 108 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms