RNA–Protein interactions for RNA: ENST00000488454.5

SKA1-204, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

TSL 3 BASIC

Gene SKA1, Length 669 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-204ENST00000488454 COX17Q14061 63 aa6.58□□□□□ -1.36
SKA1-204ENST00000488454 MEIG1Q5JSS6 88 aa6.58□□□□□ -1.36
SKA1-204ENST00000488454 Q6ZRP5 223 aa6.58□□□□□ -1.36
SKA1-204ENST00000488454 FAM30AQ9NZY2 134 aa6.58□□□□□ -1.36
SKA1-204ENST00000488454 ERG28Q9UKR5 140 aa6.58□□□□□ -1.36
SKA1-204ENST00000488454 CHTF8P0CG12 524 aa6.57□□□□□ -1.36
SKA1-204ENST00000488454 TSPEAR-AS2P59090 65 aa6.57□□□□□ -1.36
SKA1-204ENST00000488454 CIRBPQ14011 172 aaKnown RBP6.57□□□□□ -1.36
SKA1-204ENST00000488454 JOSD1Q15040 202 aaPredicted RBP6.57□□□□□ -1.36
SKA1-204ENST00000488454 Q6ZSA8 131 aa6.57□□□□□ -1.36
SKA1-204ENST00000488454 CDK2AP2O75956 126 aa6.56□□□□□ -1.36
SKA1-204ENST00000488454 SPACA4Q8TDM5 124 aa6.56□□□□□ -1.36
SKA1-204ENST00000488454 IGKV2D-26A0A0A0MRZ7 120 aa6.55□□□□□ -1.36
SKA1-204ENST00000488454 A0A0U1RRA0 63 aa6.55□□□□□ -1.36
SKA1-204ENST00000488454 ZNF815PA8K554 130 aa6.55□□□□□ -1.36
SKA1-204ENST00000488454 A0A087WYN8 130 aa6.54□□□□□ -1.36
SKA1-204ENST00000488454 PANO1I0J062 215 aa6.54□□□□□ -1.36
SKA1-204ENST00000488454 SMIM13P0DJ93 91 aa6.54□□□□□ -1.36
SKA1-204ENST00000488454 XGP55808 180 aa6.54□□□□□ -1.36
SKA1-204ENST00000488454 SCXQ7RTU7 201 aa6.54□□□□□ -1.36
SKA1-204ENST00000488454 CIRBP-AS1Q8TBR5 109 aa6.54□□□□□ -1.36
SKA1-204ENST00000488454 KRTAP4-5Q9BYR2 181 aa6.54□□□□□ -1.36
SKA1-204ENST00000488454 XAGE1AQ9HD64 81 aa6.54□□□□□ -1.36
SKA1-204ENST00000488454 DNAH8Q96JB1 4490 aa6.53□□□□□ -1.36
SKA1-204ENST00000488454 A0A0J9YXY3 114 aa6.53□□□□□ -1.36
SKA1-204ENST00000488454 HAMPP81172 84 aa6.53□□□□□ -1.36
SKA1-204ENST00000488454 SCGB1D4Q6XE38 83 aa6.53□□□□□ -1.36
SKA1-204ENST00000488454 VAMP8Q9BV40 100 aa6.53□□□□□ -1.36
SKA1-204ENST00000488454 PLAC8Q9NZF1 115 aa6.53□□□□□ -1.36
SKA1-204ENST00000488454 SND1-IT1Q9HBX3 110 aa6.52□□□□□ -1.37
SKA1-204ENST00000488454 A0A1W2PNN7 141 aa6.51□□□□□ -1.37
SKA1-204ENST00000488454 PYY3Q5JQD4 70 aa6.51□□□□□ -1.37
SKA1-204ENST00000488454 C9orf129Q5T035 196 aaKnown RBP6.51□□□□□ -1.37
SKA1-204ENST00000488454 FAM19A5Q7Z5A7 132 aaPredicted RBP6.51□□□□□ -1.37
SKA1-204ENST00000488454 PCP2Q8IVA1 136 aa6.51□□□□□ -1.37
SKA1-204ENST00000488454 MIR7-3HGQ8N6C7 128 aa6.51□□□□□ -1.37
SKA1-204ENST00000488454 TTTY13Q9BZ97 58 aa6.51□□□□□ -1.37
SKA1-204ENST00000488454 PAM16Q9Y3D7 125 aa6.51□□□□□ -1.37
SKA1-204ENST00000488454 APOBP04114 4563 aaKnown RBP6.5□□□□□ -1.37
SKA1-204ENST00000488454 TIMM17BO60830 172 aa6.5□□□□□ -1.37
SKA1-204ENST00000488454 RPL24P83731 157 aaKnown RBP6.5□□□□□ -1.37
SKA1-204ENST00000488454 SPATA45Q537H7 98 aa6.5□□□□□ -1.37
SKA1-204ENST00000488454 C7orf33Q8WU49 177 aa6.5□□□□□ -1.37
SKA1-204ENST00000488454 MIEN1Q9BRT3 115 aa6.5□□□□□ -1.37
SKA1-204ENST00000488454 FAM168BA1KXE4 195 aa6.49□□□□□ -1.37
SKA1-204ENST00000488454 SMR3BP02814 79 aaPredicted RBP6.49□□□□□ -1.37
SKA1-204ENST00000488454 S100A12P80511 92 aa6.49□□□□□ -1.37
SKA1-204ENST00000488454 LBHQ53QV2 105 aaPredicted RBP6.49□□□□□ -1.37
SKA1-204ENST00000488454 Q8N1X5 172 aa6.49□□□□□ -1.37
SKA1-204ENST00000488454 KIAA1109Q2LD37 5005 aa6.49□□□□□ -1.37
SKA1-204ENST00000488454 TMEM238C9JI98 176 aa6.48□□□□□ -1.37
SKA1-204ENST00000488454 COX8AP10176 69 aa6.48□□□□□ -1.37
SKA1-204ENST00000488454 DAND5Q8N907 189 aa6.48□□□□□ -1.37
SKA1-204ENST00000488454 NKAPP1Q8N9T2 125 aa6.48□□□□□ -1.37
SKA1-204ENST00000488454 EPM2AB3EWF7 344 aa6.47□□□□□ -1.37
SKA1-204ENST00000488454 M0QXV9 152 aa6.47□□□□□ -1.37
SKA1-204ENST00000488454 ADAMTSL4-AS1Q5T5F5 129 aa6.47□□□□□ -1.37
SKA1-204ENST00000488454 SERTAD4-AS1Q5TG53 156 aa6.47□□□□□ -1.37
SKA1-204ENST00000488454 BOD1L2Q8IYS8 172 aa6.47□□□□□ -1.37
SKA1-204ENST00000488454 COPS9Q8WXC6 57 aa6.47□□□□□ -1.37
SKA1-204ENST00000488454 C14orf144Q96I85 54 aa6.47□□□□□ -1.37
SKA1-204ENST00000488454 C22orf24Q9Y442 160 aa6.47□□□□□ -1.37
SKA1-204ENST00000488454 NPC2P61916 151 aa6.46□□□□□ -1.38
SKA1-204ENST00000488454 UBE2BP63146 152 aa6.46□□□□□ -1.38
SKA1-204ENST00000488454 Q6ZVH6 145 aa6.46□□□□□ -1.38
SKA1-204ENST00000488454 PHF5AQ7RTV0 110 aaKnown RBP6.46□□□□□ -1.38
SKA1-204ENST00000488454 UBR4Q5T4S7 5183 aa6.46□□□□□ -1.38
SKA1-204ENST00000488454 DLEU1O43261 78 aa6.45□□□□□ -1.38
SKA1-204ENST00000488454 SRSF9Q13242 221 aaKnown RBP eCLIP6.45□□□□□ -1.38
SKA1-204ENST00000488454 SLC25A34Q6PIV7 304 aa6.45□□□□□ -1.38
SKA1-204ENST00000488454 MRPL55Q7Z7F7 128 aaKnown RBP6.45□□□□□ -1.38
SKA1-204ENST00000488454 LITAFQ99732 161 aa6.45□□□□□ -1.38
SKA1-204ENST00000488454 TP73-AS1Q9UF72 201 aa6.45□□□□□ -1.38
SKA1-204ENST00000488454 IGLV5-37A0A075B6J1 123 aa6.44□□□□□ -1.38
SKA1-204ENST00000488454 LOC107984156A0A0G2JMH3 177 aa6.44□□□□□ -1.38
SKA1-204ENST00000488454 LOC105371267A0A1B0GV96 52 aa6.44□□□□□ -1.38
SKA1-204ENST00000488454 VPREB1P12018 145 aa6.44□□□□□ -1.38
SKA1-204ENST00000488454 IFITM1P13164 125 aa6.44□□□□□ -1.38
SKA1-204ENST00000488454 KRTAP7-1Q8IUC3 87 aa6.44□□□□□ -1.38
SKA1-204ENST00000488454 ARL17AQ8IVW1 177 aa6.44□□□□□ -1.38
SKA1-204ENST00000488454 LINC00308Q8TCZ7 52 aa6.44□□□□□ -1.38
SKA1-204ENST00000488454 SPANXDQ9BXN6 97 aa6.44□□□□□ -1.38
SKA1-204ENST00000488454 SPANXCQ9NY87 97 aa6.44□□□□□ -1.38
SKA1-204ENST00000488454 KRTAP23-1A1A580 65 aa6.43□□□□□ -1.38
SKA1-204ENST00000488454 GAGE10A6NGK3 116 aa6.43□□□□□ -1.38
SKA1-204ENST00000488454 M0R378 163 aa6.43□□□□□ -1.38
SKA1-204ENST00000488454 SMIM6P0DI80 62 aa6.43□□□□□ -1.38
SKA1-204ENST00000488454 RPL37AP61513 92 aaKnown RBP6.43□□□□□ -1.38
SKA1-204ENST00000488454 HSPG2P98160 4391 aa6.43□□□□□ -1.38
SKA1-204ENST00000488454 NDUFC2O95298 119 aa6.42□□□□□ -1.38
SKA1-204ENST00000488454 PRR3P79522 188 aaKnown RBP6.42□□□□□ -1.38
SKA1-204ENST00000488454 LINC00167Q96N53 147 aa6.42□□□□□ -1.38
SKA1-204ENST00000488454 SPANXB1Q9NS25 103 aaPredicted RBP6.42□□□□□ -1.38
SKA1-204ENST00000488454 RPL37AP8A6NKH3 93 aa6.41□□□□□ -1.38
SKA1-204ENST00000488454 NCR3O14931 201 aa6.41□□□□□ -1.38
SKA1-204ENST00000488454 Q5VSD8 79 aa6.41□□□□□ -1.38
SKA1-204ENST00000488454 SOSTDC1Q6X4U4 206 aa6.41□□□□□ -1.38
SKA1-204ENST00000488454 MUSTN1Q8IVN3 82 aa6.41□□□□□ -1.38
SKA1-204ENST00000488454 HIST1H4GQ99525 98 aa6.41□□□□□ -1.38
SKA1-204ENST00000488454 TRBV10-2A0A0K0K1G8 114 aa6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms