RNA–Protein interactions for RNA: ENST00000487721.1

SFXN3-206, Transcript of sideroflexin 3, humanhuman

TSL 3

Gene SFXN3, Length 761 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN3-206ENST00000487721 PHF5AQ7RTV0 110 aaKnown RBP7.6□□□□□ -1.19
SFXN3-206ENST00000487721 ZNF625Q96I27 306 aaPredicted RBP7.6□□□□□ -1.19
SFXN3-206ENST00000487721 M0QXV9 152 aa7.59□□□□□ -1.19
SFXN3-206ENST00000487721 UBE2BP63146 152 aa7.59□□□□□ -1.19
SFXN3-206ENST00000487721 LBHQ53QV2 105 aaPredicted RBP7.59□□□□□ -1.19
SFXN3-206ENST00000487721 C9orf129Q5T035 196 aaKnown RBP7.59□□□□□ -1.19
SFXN3-206ENST00000487721 XAGE1AQ9HD64 81 aa7.59□□□□□ -1.19
SFXN3-206ENST00000487721 NDUFA12Q9UI09 145 aa7.59□□□□□ -1.19
SFXN3-206ENST00000487721 MYMXA0A1B0GTQ4 84 aa7.58□□□□□ -1.2
SFXN3-206ENST00000487721 HNRNPA3P51991 378 aaKnown RBP7.58□□□□□ -1.2
SFXN3-206ENST00000487721 ANKRD39Q53RE8 183 aa7.58□□□□□ -1.2
SFXN3-206ENST00000487721 ERG28Q9UKR5 140 aa7.58□□□□□ -1.2
SFXN3-206ENST00000487721 IGKV2D-26A0A0A0MRZ7 120 aa7.57□□□□□ -1.2
SFXN3-206ENST00000487721 PFN2P35080 140 aa7.57□□□□□ -1.2
SFXN3-206ENST00000487721 NMUP48645 174 aa7.57□□□□□ -1.2
SFXN3-206ENST00000487721 HERV-K104P63124 156 aa7.57□□□□□ -1.2
SFXN3-206ENST00000487721 COX17Q14061 63 aa7.57□□□□□ -1.2
SFXN3-206ENST00000487721 C1orf137Q5JT78 98 aa7.57□□□□□ -1.2
SFXN3-206ENST00000487721 SPINK6Q6UWN8 80 aa7.57□□□□□ -1.2
SFXN3-206ENST00000487721 PSORS1C2Q9UIG4 136 aa7.57□□□□□ -1.2
SFXN3-206ENST00000487721 MEIG1Q5JSS6 88 aa7.56□□□□□ -1.2
SFXN3-206ENST00000487721 PLA2G2DQ9UNK4 145 aa7.56□□□□□ -1.2
SFXN3-206ENST00000487721 HSBP1L1C9JCN9 74 aa7.55□□□□□ -1.2
SFXN3-206ENST00000487721 JOSD1Q15040 202 aaPredicted RBP7.55□□□□□ -1.2
SFXN3-206ENST00000487721 REG3GQ6UW15 175 aa7.55□□□□□ -1.2
SFXN3-206ENST00000487721 C22orf24Q9Y442 160 aa7.55□□□□□ -1.2
SFXN3-206ENST00000487721 A0A0U1RRA0 63 aa7.54□□□□□ -1.2
SFXN3-206ENST00000487721 SMIM13P0DJ93 91 aa7.54□□□□□ -1.2
SFXN3-206ENST00000487721 LINC00158P58513 81 aa7.54□□□□□ -1.2
SFXN3-206ENST00000487721 TTTY13Q9BZ97 58 aa7.54□□□□□ -1.2
SFXN3-206ENST00000487721 TP73-AS1Q9UF72 201 aa7.54□□□□□ -1.2
SFXN3-206ENST00000487721 PKHD1L1Q86WI1 4243 aa7.54□□□□□ -1.2
SFXN3-206ENST00000487721 ZNF815PA8K554 130 aa7.53□□□□□ -1.2
SFXN3-206ENST00000487721 LINC00587B1AMM8 73 aa7.53□□□□□ -1.2
SFXN3-206ENST00000487721 C4orf48Q5BLP8 95 aa7.53□□□□□ -1.2
SFXN3-206ENST00000487721 NKAPP1Q8N9T2 125 aa7.53□□□□□ -1.2
SFXN3-206ENST00000487721 FAT3Q8TDW7 4589 aa7.53□□□□□ -1.2
SFXN3-206ENST00000487721 A0A0J9YXY3 114 aa7.52□□□□□ -1.21
SFXN3-206ENST00000487721 LOC100996750A0A140TA64 210 aa7.52□□□□□ -1.21
SFXN3-206ENST00000487721 RPL24P83731 157 aaKnown RBP7.52□□□□□ -1.21
SFXN3-206ENST00000487721 MRPL55Q7Z7F7 128 aaKnown RBP7.52□□□□□ -1.21
SFXN3-206ENST00000487721 KRTAP7-1Q8IUC3 87 aa7.52□□□□□ -1.21
SFXN3-206ENST00000487721 KRTAP4-6Q9BYQ5 205 aa7.52□□□□□ -1.21
SFXN3-206ENST00000487721 LRP1Q07954 4544 aaKnown RBP7.51□□□□□ -1.21
SFXN3-206ENST00000487721 IGLV7-43P04211 117 aa7.51□□□□□ -1.21
SFXN3-206ENST00000487721 SRSF9Q13242 221 aaKnown RBP eCLIP7.51□□□□□ -1.21
SFXN3-206ENST00000487721 PYY3Q5JQD4 70 aa7.51□□□□□ -1.21
SFXN3-206ENST00000487721 PCP2Q8IVA1 136 aa7.51□□□□□ -1.21
SFXN3-206ENST00000487721 SND1-IT1Q9HBX3 110 aa7.51□□□□□ -1.21
SFXN3-206ENST00000487721 MIR7-3HGQ8N6C7 128 aa7.5□□□□□ -1.21
SFXN3-206ENST00000487721 DIRC1Q969H9 104 aa7.5□□□□□ -1.21
SFXN3-206ENST00000487721 VAMP8Q9BV40 100 aa7.5□□□□□ -1.21
SFXN3-206ENST00000487721 IGLV5-37A0A075B6J1 123 aa7.49□□□□□ -1.21
SFXN3-206ENST00000487721 DAND5Q8N907 189 aa7.49□□□□□ -1.21
SFXN3-206ENST00000487721 PAM16Q9Y3D7 125 aa7.49□□□□□ -1.21
SFXN3-206ENST00000487721 SPATA45Q537H7 98 aa7.48□□□□□ -1.21
SFXN3-206ENST00000487721 SCGB1D4Q6XE38 83 aa7.48□□□□□ -1.21
SFXN3-206ENST00000487721 LINC00167Q96N53 147 aa7.48□□□□□ -1.21
SFXN3-206ENST00000487721 HMCN2Q8NDA2 5059 aa7.48□□□□□ -1.21
SFXN3-206ENST00000487721 GAGE10A6NGK3 116 aa7.47□□□□□ -1.21
SFXN3-206ENST00000487721 KRTAP11-1Q8IUC1 163 aa7.47□□□□□ -1.21
SFXN3-206ENST00000487721 LINC01600Q96MT4 127 aa7.47□□□□□ -1.21
SFXN3-206ENST00000487721 RPL37AP8A6NKH3 93 aa7.46□□□□□ -1.22
SFXN3-206ENST00000487721 TIMM17BO60830 172 aa7.46□□□□□ -1.22
SFXN3-206ENST00000487721 ADAMTSL4-AS1Q5T5F5 129 aa7.46□□□□□ -1.22
SFXN3-206ENST00000487721 UBR4Q5T4S7 5183 aa7.45□□□□□ -1.22
SFXN3-206ENST00000487721 TMEM238C9JI98 176 aa7.45□□□□□ -1.22
SFXN3-206ENST00000487721 MT1HL1P0DM35 61 aa7.45□□□□□ -1.22
SFXN3-206ENST00000487721 COX8AP10176 69 aa7.45□□□□□ -1.22
SFXN3-206ENST00000487721 NPC2P61916 151 aa7.45□□□□□ -1.22
SFXN3-206ENST00000487721 LITAFQ99732 161 aa7.45□□□□□ -1.22
SFXN3-206ENST00000487721 MIEN1Q9BRT3 115 aa7.45□□□□□ -1.22
SFXN3-206ENST00000487721 H0Y9J4 135 aa7.44□□□□□ -1.22
SFXN3-206ENST00000487721 ZNF861PO60384 105 aa7.44□□□□□ -1.22
SFXN3-206ENST00000487721 BCE1O60756 84 aa7.44□□□□□ -1.22
SFXN3-206ENST00000487721 VPREB1P12018 145 aa7.44□□□□□ -1.22
SFXN3-206ENST00000487721 RPL28P46779 137 aaKnown RBP7.44□□□□□ -1.22
SFXN3-206ENST00000487721 BOD1L2Q8IYS8 172 aa7.44□□□□□ -1.22
SFXN3-206ENST00000487721 IGKV2-28A0A075B6P5 120 aa7.43□□□□□ -1.22
SFXN3-206ENST00000487721 LOC105371267A0A1B0GV96 52 aa7.43□□□□□ -1.22
SFXN3-206ENST00000487721 IGKV2D-28P01615 120 aa7.43□□□□□ -1.22
SFXN3-206ENST00000487721 Q8NDZ9 215 aa7.43□□□□□ -1.22
SFXN3-206ENST00000487721 C14orf144Q96I85 54 aa7.43□□□□□ -1.22
SFXN3-206ENST00000487721 LOC107984156A0A0G2JMH3 177 aa7.42□□□□□ -1.22
SFXN3-206ENST00000487721 SOSTDC1Q6X4U4 206 aa7.42□□□□□ -1.22
SFXN3-206ENST00000487721 ARL17AQ8IVW1 177 aa7.42□□□□□ -1.22
SFXN3-206ENST00000487721 SPANXDQ9BXN6 97 aa7.42□□□□□ -1.22
SFXN3-206ENST00000487721 SPANXCQ9NY87 97 aa7.42□□□□□ -1.22
SFXN3-206ENST00000487721 IGLV1-50A0A075B6I6 118 aa7.41□□□□□ -1.22
SFXN3-206ENST00000487721 M0R378 163 aa7.41□□□□□ -1.22
SFXN3-206ENST00000487721 DLEU1O43261 78 aa7.41□□□□□ -1.22
SFXN3-206ENST00000487721 UBE2AP49459 152 aa7.41□□□□□ -1.22
SFXN3-206ENST00000487721 S100A12P80511 92 aa7.41□□□□□ -1.22
SFXN3-206ENST00000487721 LINC00308Q8TCZ7 52 aa7.41□□□□□ -1.22
SFXN3-206ENST00000487721 NCR3O14931 201 aa7.4□□□□□ -1.22
SFXN3-206ENST00000487721 EIF4EBP3O60516 100 aaPredicted RBP7.4□□□□□ -1.22
SFXN3-206ENST00000487721 SMIM6P0DI80 62 aa7.4□□□□□ -1.22
SFXN3-206ENST00000487721 SLC25A34Q6PIV7 304 aa7.4□□□□□ -1.22
SFXN3-206ENST00000487721 SPANXB1Q9NS25 103 aaPredicted RBP7.4□□□□□ -1.22
SFXN3-206ENST00000487721 Q6ZVH6 145 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms