RNA–Protein interactions for RNA: ENST00000487676.1

HLA-DQB1-209, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

Gene HLA-DQB1, Length 4,644 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-209ENST00000487676 SMIM29Q86T20 159 aa10.52□□□□□ -0.73
HLA-DQB1-209ENST00000487676 LINC00208Q96KT6 92 aa10.52□□□□□ -0.73
HLA-DQB1-209ENST00000487676 PRR15LQ9BU68 103 aa10.5□□□□□ -0.73
HLA-DQB1-209ENST00000487676 IGLV1-51P01701 117 aa10.5□□□□□ -0.73
HLA-DQB1-209ENST00000487676 TRIOO75962 3097 aa10.49□□□□□ -0.73
HLA-DQB1-209ENST00000487676 PSCAO43653 123 aa10.49□□□□□ -0.73
HLA-DQB1-209ENST00000487676 OXTP01178 125 aa10.49□□□□□ -0.73
HLA-DQB1-209ENST00000487676 H0Y9J4 135 aa10.49□□□□□ -0.73
HLA-DQB1-209ENST00000487676 KPRPQ5T749 579 aaPredicted RBP10.49□□□□□ -0.73
HLA-DQB1-209ENST00000487676 UBE2DNLQ8IWF7 75 aa10.48□□□□□ -0.73
HLA-DQB1-209ENST00000487676 C22orf24Q9Y442 160 aa10.48□□□□□ -0.73
HLA-DQB1-209ENST00000487676 LYPD5Q6UWN5 251 aa10.48□□□□□ -0.73
HLA-DQB1-209ENST00000487676 SPTBN4Q9H254 2564 aa10.48□□□□□ -0.73
HLA-DQB1-209ENST00000487676 ELOF1P60002 83 aaKnown RBP10.48□□□□□ -0.73
HLA-DQB1-209ENST00000487676 C10orf25Q5T742 122 aa10.46□□□□□ -0.73
HLA-DQB1-209ENST00000487676 CDH23Q9H251 3354 aa10.46□□□□□ -0.73
HLA-DQB1-209ENST00000487676 IGLV6-57P01721 117 aa10.45□□□□□ -0.74
HLA-DQB1-209ENST00000487676 A0A1B0GW54 56 aa10.45□□□□□ -0.74
HLA-DQB1-209ENST00000487676 VPS13AQ96RL7 3174 aa10.45□□□□□ -0.74
HLA-DQB1-209ENST00000487676 A0A0J9YWU9 116 aa10.44□□□□□ -0.74
HLA-DQB1-209ENST00000487676 HCG22E2RYF7 251 aa10.44□□□□□ -0.74
HLA-DQB1-209ENST00000487676 IGHV4-30-4P0DP06 118 aa10.44□□□□□ -0.74
HLA-DQB1-209ENST00000487676 LAMA1P25391 3075 aa10.44□□□□□ -0.74
HLA-DQB1-209ENST00000487676 LIMD2Q9BT23 127 aa10.44□□□□□ -0.74
HLA-DQB1-209ENST00000487676 hDV103S1A0JD37 113 aa10.43□□□□□ -0.74
HLA-DQB1-209ENST00000487676 B9D2Q9BPU9 175 aa10.43□□□□□ -0.74
HLA-DQB1-209ENST00000487676 RPL37AP8A6NKH3 93 aa10.43□□□□□ -0.74
HLA-DQB1-209ENST00000487676 IL17DQ8TAD2 202 aa10.43□□□□□ -0.74
HLA-DQB1-209ENST00000487676 TRBV7-4A0A0J9YYF1 115 aa10.42□□□□□ -0.74
HLA-DQB1-209ENST00000487676 KIAA0087Q14695 138 aa10.4□□□□□ -0.74
HLA-DQB1-209ENST00000487676 VCANP13611 3396 aa10.4□□□□□ -0.74
HLA-DQB1-209ENST00000487676 DSPP15924 2871 aaKnown RBP10.4□□□□□ -0.74
HLA-DQB1-209ENST00000487676 C6orf48Q9UBA6 75 aa10.4□□□□□ -0.74
HLA-DQB1-209ENST00000487676 POLQO75417 2590 aa10.4□□□□□ -0.74
HLA-DQB1-209ENST00000487676 M0R2N4 97 aa10.39□□□□□ -0.75
HLA-DQB1-209ENST00000487676 FP248Q71RG6 208 aaPredicted RBP10.39□□□□□ -0.75
HLA-DQB1-209ENST00000487676 Q6ZRU5 148 aa10.37□□□□□ -0.75
HLA-DQB1-209ENST00000487676 H0Y9P7 68 aa10.37□□□□□ -0.75
HLA-DQB1-209ENST00000487676 IGKV4-1P06312 121 aa10.37□□□□□ -0.75
HLA-DQB1-209ENST00000487676 A0A096LNT2 108 aa10.35□□□□□ -0.75
HLA-DQB1-209ENST00000487676 C1orf64Q8NEQ6 169 aa10.35□□□□□ -0.75
HLA-DQB1-209ENST00000487676 CASC2Q6XLA1 102 aa10.35□□□□□ -0.75
HLA-DQB1-209ENST00000487676 GVQW2A0A096LPI5 108 aaPredicted RBP10.34□□□□□ -0.75
HLA-DQB1-209ENST00000487676 Q8NBF4 154 aa10.34□□□□□ -0.75
HLA-DQB1-209ENST00000487676 PRUNE2Q8WUY3 3088 aa10.33□□□□□ -0.76
HLA-DQB1-209ENST00000487676 A8MUN3 132 aa10.33□□□□□ -0.76
HLA-DQB1-209ENST00000487676 CELSR3Q9NYQ7 3312 aa10.32□□□□□ -0.76
HLA-DQB1-209ENST00000487676 A0A087WSZ3 146 aa10.32□□□□□ -0.76
HLA-DQB1-209ENST00000487676 IGKV2-24A0A0C4DH68 120 aa10.32□□□□□ -0.76
HLA-DQB1-209ENST00000487676 A0A096LNI7 61 aa10.31□□□□□ -0.76
HLA-DQB1-209ENST00000487676 FLNBO75369 2602 aaKnown RBP10.31□□□□□ -0.76
HLA-DQB1-209ENST00000487676 MTORP42345 2549 aa10.31□□□□□ -0.76
HLA-DQB1-209ENST00000487676 FRYQ5TBA9 3013 aa10.31□□□□□ -0.76
HLA-DQB1-209ENST00000487676 DEFB116Q30KQ4 102 aa10.31□□□□□ -0.76
HLA-DQB1-209ENST00000487676 CD164Q04900 197 aa10.3□□□□□ -0.76
HLA-DQB1-209ENST00000487676 VPREB1P12018 145 aa10.3□□□□□ -0.76
HLA-DQB1-209ENST00000487676 PRR15Q8IV56 129 aa10.29□□□□□ -0.76
HLA-DQB1-209ENST00000487676 LINC00528Q8N1L1 170 aa10.29□□□□□ -0.76
HLA-DQB1-209ENST00000487676 C7orf33Q8WU49 177 aa10.29□□□□□ -0.76
HLA-DQB1-209ENST00000487676 TRAV22A0A0B4J277 110 aa10.29□□□□□ -0.76
HLA-DQB1-209ENST00000487676 OCR1Q9BZK8 76 aa10.28□□□□□ -0.76
HLA-DQB1-209ENST00000487676 EPG5Q9HCE0 2579 aa10.28□□□□□ -0.76
HLA-DQB1-209ENST00000487676 H3BPC8 53 aa10.27□□□□□ -0.77
HLA-DQB1-209ENST00000487676 DEFB131BA0A096LNP1 70 aa10.26□□□□□ -0.77
HLA-DQB1-209ENST00000487676 ANKRD17O75179 2603 aaKnown RBP10.25□□□□□ -0.77
HLA-DQB1-209ENST00000487676 X6R8D5 127 aa10.25□□□□□ -0.77
HLA-DQB1-209ENST00000487676 CSNK1G2-AS1Q8NCQ2 148 aa10.25□□□□□ -0.77
HLA-DQB1-209ENST00000487676 REG3GQ6UW15 175 aa10.25□□□□□ -0.77
HLA-DQB1-209ENST00000487676 GIG44P09565 113 aaPredicted RBP10.24□□□□□ -0.77
HLA-DQB1-209ENST00000487676 EPM2AB3EWF7 344 aa10.24□□□□□ -0.77
HLA-DQB1-209ENST00000487676 FRYLO94915 3013 aa10.24□□□□□ -0.77
HLA-DQB1-209ENST00000487676 WDFY4Q6ZS81 3184 aa10.24□□□□□ -0.77
HLA-DQB1-209ENST00000487676 C11orf45Q8TAV5 145 aa10.24□□□□□ -0.77
HLA-DQB1-209ENST00000487676 PCOTHQ58A44 107 aa10.23□□□□□ -0.77
HLA-DQB1-209ENST00000487676 K7EQZ3 153 aa10.22□□□□□ -0.77
HLA-DQB1-209ENST00000487676 Q6ZRX8 168 aa10.22□□□□□ -0.77
HLA-DQB1-209ENST00000487676 F8P00451 2351 aa10.22□□□□□ -0.77
HLA-DQB1-209ENST00000487676 Q1T7F1 81 aa10.22□□□□□ -0.77
HLA-DQB1-209ENST00000487676 CYP4F30PQ9H0H9 118 aa10.22□□□□□ -0.77
HLA-DQB1-209ENST00000487676 C16orf95Q9H693 158 aa10.22□□□□□ -0.77
HLA-DQB1-209ENST00000487676 FSHBP01225 129 aa10.22□□□□□ -0.77
HLA-DQB1-209ENST00000487676 MGAQ8IWI9 3026 aa10.21□□□□□ -0.77
HLA-DQB1-209ENST00000487676 FAM229BQ4G0N7 80 aa10.21□□□□□ -0.78
HLA-DQB1-209ENST00000487676 FREM2Q5SZK8 3169 aa10.21□□□□□ -0.78
HLA-DQB1-209ENST00000487676 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.21□□□□□ -0.78
HLA-DQB1-209ENST00000487676 SPEGQ15772 3267 aa10.19□□□□□ -0.78
HLA-DQB1-209ENST00000487676 Q9BRP9 147 aa10.18□□□□□ -0.78
HLA-DQB1-209ENST00000487676 Q8N377 158 aa10.17□□□□□ -0.78
HLA-DQB1-209ENST00000487676 KRTAP10-9P60411 292 aa10.16□□□□□ -0.78
HLA-DQB1-209ENST00000487676 LINC00476Q8WZB0 136 aa10.16□□□□□ -0.78
HLA-DQB1-209ENST00000487676 SZT2Q5T011 3432 aa10.16□□□□□ -0.78
HLA-DQB1-209ENST00000487676 LINC00612Q8N6U2 182 aa10.16□□□□□ -0.78
HLA-DQB1-209ENST00000487676 ST20-AS1Q8NBB2 130 aa10.16□□□□□ -0.78
HLA-DQB1-209ENST00000487676 KCNQ1DNQ9H478 68 aa10.16□□□□□ -0.78
HLA-DQB1-209ENST00000487676 Q6ZTC4 211 aa10.15□□□□□ -0.78
HLA-DQB1-209ENST00000487676 KTN1-AS1Q86SY8 53 aa10.15□□□□□ -0.78
HLA-DQB1-209ENST00000487676 PRR34Q9NV39 138 aa10.15□□□□□ -0.78
HLA-DQB1-209ENST00000487676 ATP11AUNQ6ZP68 121 aa10.14□□□□□ -0.79
HLA-DQB1-209ENST00000487676 Q6ZRP5 223 aa10.14□□□□□ -0.79
HLA-DQB1-209ENST00000487676 C14orf177Q52M58 125 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms