RNA–Protein interactions for RNA: ENST00000487428.1

PTPRE-209, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 3

Gene PTPRE, Length 325 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-209ENST00000487428 M0QXV9 152 aa4.13□□□□□ -1.75
PTPRE-209ENST00000487428 NDUFC2O95298 119 aa4.13□□□□□ -1.75
PTPRE-209ENST00000487428 SMR3BP02814 79 aaPredicted RBP4.13□□□□□ -1.75
PTPRE-209ENST00000487428 SMIM6P0DI80 62 aa4.13□□□□□ -1.75
PTPRE-209ENST00000487428 VPREB1P12018 145 aa4.13□□□□□ -1.75
PTPRE-209ENST00000487428 RPL37AP61513 92 aaKnown RBP4.13□□□□□ -1.75
PTPRE-209ENST00000487428 PRR3P79522 188 aaKnown RBP4.13□□□□□ -1.75
PTPRE-209ENST00000487428 RPL24P83731 157 aaKnown RBP4.13□□□□□ -1.75
PTPRE-209ENST00000487428 MEIG1Q5JSS6 88 aa4.13□□□□□ -1.75
PTPRE-209ENST00000487428 KRTAP4-5Q9BYR2 181 aa4.13□□□□□ -1.75
PTPRE-209ENST00000487428 TRBV10-2A0A0K0K1G8 114 aa4.12□□□□□ -1.75
PTPRE-209ENST00000487428 HAMPP81172 84 aa4.12□□□□□ -1.75
PTPRE-209ENST00000487428 SRSF9Q13242 221 aaKnown RBP eCLIP4.12□□□□□ -1.75
PTPRE-209ENST00000487428 SERTAD4-AS1Q5TG53 156 aa4.12□□□□□ -1.75
PTPRE-209ENST00000487428 MRPL55Q7Z7F7 128 aaKnown RBP4.12□□□□□ -1.75
PTPRE-209ENST00000487428 C12orf57Q99622 126 aa4.12□□□□□ -1.75
PTPRE-209ENST00000487428 LITAFQ99732 161 aa4.12□□□□□ -1.75
PTPRE-209ENST00000487428 XAGE1AQ9HD64 81 aa4.12□□□□□ -1.75
PTPRE-209ENST00000487428 C22orf24Q9Y442 160 aa4.12□□□□□ -1.75
PTPRE-209ENST00000487428 PKHD1L1Q86WI1 4243 aa4.11□□□□□ -1.75
PTPRE-209ENST00000487428 FAM168BA1KXE4 195 aa4.11□□□□□ -1.75
PTPRE-209ENST00000487428 SMIM13P0DJ93 91 aa4.11□□□□□ -1.75
PTPRE-209ENST00000487428 PFN2P35080 140 aa4.11□□□□□ -1.75
PTPRE-209ENST00000487428 LINC00158P58513 81 aa4.11□□□□□ -1.75
PTPRE-209ENST00000487428 JOSD1Q15040 202 aaPredicted RBP4.11□□□□□ -1.75
PTPRE-209ENST00000487428 MIR7-3HGQ8N6C7 128 aa4.11□□□□□ -1.75
PTPRE-209ENST00000487428 PSORS1C2Q9UIG4 136 aa4.11□□□□□ -1.75
PTPRE-209ENST00000487428 DMBT1Q9UGM3 2413 aaPredicted RBP4.1□□□□□ -1.75
PTPRE-209ENST00000487428 ZNF815PA8K554 130 aa4.1□□□□□ -1.75
PTPRE-209ENST00000487428 HSBP1L1C9JCN9 74 aa4.1□□□□□ -1.75
PTPRE-209ENST00000487428 DLEU1O43261 78 aa4.1□□□□□ -1.75
PTPRE-209ENST00000487428 OXTP01178 125 aa4.1□□□□□ -1.75
PTPRE-209ENST00000487428 IFITM1P13164 125 aa4.1□□□□□ -1.75
PTPRE-209ENST00000487428 ANKRD39Q53RE8 183 aa4.1□□□□□ -1.75
PTPRE-209ENST00000487428 SPINK6Q6UWN8 80 aa4.1□□□□□ -1.75
PTPRE-209ENST00000487428 PHF5AQ7RTV0 110 aaKnown RBP4.1□□□□□ -1.75
PTPRE-209ENST00000487428 FAM19A5Q7Z5A7 132 aaPredicted RBP4.1□□□□□ -1.75
PTPRE-209ENST00000487428 NKAPP1Q8N9T2 125 aa4.1□□□□□ -1.75
PTPRE-209ENST00000487428 COPS9Q8WXC6 57 aa4.1□□□□□ -1.75
PTPRE-209ENST00000487428 SPANXDQ9BXN6 97 aa4.1□□□□□ -1.75
PTPRE-209ENST00000487428 SPANXCQ9NY87 97 aa4.1□□□□□ -1.75
PTPRE-209ENST00000487428 IGLV1-50A0A075B6I6 118 aa4.09□□□□□ -1.75
PTPRE-209ENST00000487428 TMEM238C9JI98 176 aa4.09□□□□□ -1.75
PTPRE-209ENST00000487428 H0Y9J4 135 aa4.09□□□□□ -1.75
PTPRE-209ENST00000487428 M0R378 163 aa4.09□□□□□ -1.75
PTPRE-209ENST00000487428 INAFM2P0DMQ5 153 aa4.09□□□□□ -1.75
PTPRE-209ENST00000487428 LINC00167Q96N53 147 aa4.09□□□□□ -1.75
PTPRE-209ENST00000487428 SPANXB1Q9NS25 103 aaPredicted RBP4.09□□□□□ -1.75
PTPRE-209ENST00000487428 CBY1Q9Y3M2 126 aa4.09□□□□□ -1.75
PTPRE-209ENST00000487428 KRTAP29-1A8MX34 341 aaPredicted RBP4.08□□□□□ -1.76
PTPRE-209ENST00000487428 IGLV7-43P04211 117 aa4.08□□□□□ -1.76
PTPRE-209ENST00000487428 SPRR1AP35321 89 aa4.08□□□□□ -1.76
PTPRE-209ENST00000487428 ADAMTSL4-AS1Q5T5F5 129 aa4.08□□□□□ -1.76
PTPRE-209ENST00000487428 KRTAP13-1Q8IUC0 172 aa4.08□□□□□ -1.76
PTPRE-209ENST00000487428 KRTAP11-1Q8IUC1 163 aa4.08□□□□□ -1.76
PTPRE-209ENST00000487428 BOD1L2Q8IYS8 172 aa4.08□□□□□ -1.76
PTPRE-209ENST00000487428 Q8NDZ9 215 aa4.08□□□□□ -1.76
PTPRE-209ENST00000487428 MIEN1Q9BRT3 115 aa4.08□□□□□ -1.76
PTPRE-209ENST00000487428 KCNQ1DNQ9H478 68 aa4.08□□□□□ -1.76
PTPRE-209ENST00000487428 PRYO14603 147 aa4.07□□□□□ -1.76
PTPRE-209ENST00000487428 BCE1O60756 84 aa4.07□□□□□ -1.76
PTPRE-209ENST00000487428 SCGB1D1O95968 90 aa4.07□□□□□ -1.76
PTPRE-209ENST00000487428 COX8AP10176 69 aa4.07□□□□□ -1.76
PTPRE-209ENST00000487428 UBE2BP63146 152 aa4.07□□□□□ -1.76
PTPRE-209ENST00000487428 SOSTDC1Q6X4U4 206 aa4.07□□□□□ -1.76
PTPRE-209ENST00000487428 PCP2Q8IVA1 136 aa4.07□□□□□ -1.76
PTPRE-209ENST00000487428 ATOH7Q8N100 152 aa4.07□□□□□ -1.76
PTPRE-209ENST00000487428 LINC00308Q8TCZ7 52 aa4.07□□□□□ -1.76
PTPRE-209ENST00000487428 MYCBP2O75592 4640 aa4.07□□□□□ -1.76
PTPRE-209ENST00000487428 ABCA13Q86UQ4 5058 aa4.06□□□□□ -1.76
PTPRE-209ENST00000487428 KRTAP4-16G5E9R7 235 aaPredicted RBP4.06□□□□□ -1.76
PTPRE-209ENST00000487428 ZNF861PO60384 105 aa4.06□□□□□ -1.76
PTPRE-209ENST00000487428 IGLV6-57P01721 117 aa4.06□□□□□ -1.76
PTPRE-209ENST00000487428 HNRNPA3P51991 378 aaKnown RBP4.06□□□□□ -1.76
PTPRE-209ENST00000487428 PYY3Q5JQD4 70 aa4.06□□□□□ -1.76
PTPRE-209ENST00000487428 C1orf137Q5JT78 98 aa4.06□□□□□ -1.76
PTPRE-209ENST00000487428 SCGB1D4Q6XE38 83 aa4.06□□□□□ -1.76
PTPRE-209ENST00000487428 LINC00337Q8N6G1 96 aa4.06□□□□□ -1.76
PTPRE-209ENST00000487428 DIRC1Q969H9 104 aa4.06□□□□□ -1.76
PTPRE-209ENST00000487428 HIGD1BQ9P298 99 aa4.06□□□□□ -1.76
PTPRE-209ENST00000487428 A0A0U1RRA0 63 aa4.05□□□□□ -1.76
PTPRE-209ENST00000487428 RPL28P46779 137 aaKnown RBP4.05□□□□□ -1.76
PTPRE-209ENST00000487428 REG3GQ6UW15 175 aa4.05□□□□□ -1.76
PTPRE-209ENST00000487428 TTTY13Q9BZ97 58 aa4.05□□□□□ -1.76
PTPRE-209ENST00000487428 TMEM126AQ9H061 195 aa4.05□□□□□ -1.76
PTPRE-209ENST00000487428 PCLOQ9Y6V0 5065 aa4.05□□□□□ -1.76
PTPRE-209ENST00000487428 IGKV2-28A0A075B6P5 120 aa4.04□□□□□ -1.76
PTPRE-209ENST00000487428 EIF4EBP3O60516 100 aaPredicted RBP4.04□□□□□ -1.76
PTPRE-209ENST00000487428 IGKV2D-28P01615 120 aa4.04□□□□□ -1.76
PTPRE-209ENST00000487428 DAND5Q8N907 189 aa4.04□□□□□ -1.76
PTPRE-209ENST00000487428 LINC01600Q96MT4 127 aa4.04□□□□□ -1.76
PTPRE-209ENST00000487428 VAMP8Q9BV40 100 aa4.04□□□□□ -1.76
PTPRE-209ENST00000487428 TRBV7-6A0A0J9YX20 115 aa4.03□□□□□ -1.76
PTPRE-209ENST00000487428 TRBV10-3A0A0K0K1G6 114 aa4.03□□□□□ -1.76
PTPRE-209ENST00000487428 RPL37AP8A6NKH3 93 aa4.03□□□□□ -1.76
PTPRE-209ENST00000487428 DDTP30046 118 aa4.03□□□□□ -1.76
PTPRE-209ENST00000487428 TAL2Q16559 108 aa4.03□□□□□ -1.76
PTPRE-209ENST00000487428 SPATA45Q537H7 98 aa4.03□□□□□ -1.76
PTPRE-209ENST00000487428 LRP1Q07954 4544 aaKnown RBP4.03□□□□□ -1.76
PTPRE-209ENST00000487428 KRTAP1-4P0C5Y4 121 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms