RNA–Protein interactions for RNA: ENST00000487245.5

HLA-C-208, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,880 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-208ENST00000487245 RETNQ9HD89 108 aa17.63■□□□□ 0.41
HLA-C-208ENST00000487245 NCR3O14931 201 aa17.62■□□□□ 0.41
HLA-C-208ENST00000487245 KPRPQ5T749 579 aaPredicted RBP17.62■□□□□ 0.41
HLA-C-208ENST00000487245 GVQW2A0A096LPI5 108 aaPredicted RBP17.61■□□□□ 0.41
HLA-C-208ENST00000487245 JMJD7-PLA2G4BH0Y9G9 81 aa17.61■□□□□ 0.41
HLA-C-208ENST00000487245 Q6JHZ5 121 aa17.6■□□□□ 0.41
HLA-C-208ENST00000487245 Q8NDZ9 215 aa17.6■□□□□ 0.41
HLA-C-208ENST00000487245 TMEM256-PLSCR3K7ERE1 68 aa17.59■□□□□ 0.41
HLA-C-208ENST00000487245 UNQ6190/PRO20217Q6UXQ8 127 aa17.59■□□□□ 0.41
HLA-C-208ENST00000487245 C10orf25Q5T742 122 aa17.58■□□□□ 0.41
HLA-C-208ENST00000487245 CCKP06307 115 aa17.57■□□□□ 0.4
HLA-C-208ENST00000487245 C6orf223Q8N319 242 aa17.56■□□□□ 0.4
HLA-C-208ENST00000487245 Q6ZTC4 211 aa17.56■□□□□ 0.4
HLA-C-208ENST00000487245 LINC00846Q9NV44 126 aa17.56■□□□□ 0.4
HLA-C-208ENST00000487245 S100A7L2Q5SY68 101 aa17.55■□□□□ 0.4
HLA-C-208ENST00000487245 SS18L2Q9UHA2 77 aa17.55■□□□□ 0.4
HLA-C-208ENST00000487245 HIST1H4AP62805 103 aaKnown RBP17.54■□□□□ 0.4
HLA-C-208ENST00000487245 C6orf99Q4VX62 202 aa17.54■□□□□ 0.4
HLA-C-208ENST00000487245 LINC00575Q6W349 94 aa17.54■□□□□ 0.4
HLA-C-208ENST00000487245 IGLV6-57P01721 117 aa17.52■□□□□ 0.39
HLA-C-208ENST00000487245 WFDC10BQ8IUB3 73 aa17.51■□□□□ 0.39
HLA-C-208ENST00000487245 LINC00526Q96FQ7 95 aa17.47■□□□□ 0.39
HLA-C-208ENST00000487245 TRRAPQ9Y4A5 3859 aa17.46■□□□□ 0.39
HLA-C-208ENST00000487245 ESRGQ1W209 222 aa17.46■□□□□ 0.38
HLA-C-208ENST00000487245 C11orf45Q8TAV5 145 aa17.46■□□□□ 0.38
HLA-C-208ENST00000487245 C6orf48Q9UBA6 75 aa17.46■□□□□ 0.38
HLA-C-208ENST00000487245 DEFB131BA0A096LNP1 70 aa17.45■□□□□ 0.38
HLA-C-208ENST00000487245 C3orf22Q8N5N4 141 aa17.45■□□□□ 0.38
HLA-C-208ENST00000487245 hADV29S1A0JD25 119 aa17.44■□□□□ 0.38
HLA-C-208ENST00000487245 H3BQ85 93 aa17.44■□□□□ 0.38
HLA-C-208ENST00000487245 ATOX1O00244 68 aa17.44■□□□□ 0.38
HLA-C-208ENST00000487245 UQCRQO14949 82 aa17.44■□□□□ 0.38
HLA-C-208ENST00000487245 KRTAP26-1Q6PEX3 210 aa17.44■□□□□ 0.38
HLA-C-208ENST00000487245 ZNF561-AS1K7EIQ3 104 aa17.43■□□□□ 0.38
HLA-C-208ENST00000487245 RPL18AQ02543 176 aaKnown RBP17.42■□□□□ 0.38
HLA-C-208ENST00000487245 IGKV3D-7A0A0C4DH55 119 aa17.41■□□□□ 0.38
HLA-C-208ENST00000487245 LINC01556Q5JQF7 62 aa17.41■□□□□ 0.38
HLA-C-208ENST00000487245 ATP5EP2Q5VTU8 51 aa17.41■□□□□ 0.38
HLA-C-208ENST00000487245 MAST4O15021 2626 aa17.4■□□□□ 0.38
HLA-C-208ENST00000487245 C2orf48Q96LS8 159 aa17.39■□□□□ 0.37
HLA-C-208ENST00000487245 F8WDY8 70 aa17.38■□□□□ 0.37
HLA-C-208ENST00000487245 CAMK2N2Q96S95 79 aa17.38■□□□□ 0.37
HLA-C-208ENST00000487245 COX7CP15954 63 aa17.37■□□□□ 0.37
HLA-C-208ENST00000487245 LOC110117498A0A087WWA1 95 aa17.37■□□□□ 0.37
HLA-C-208ENST00000487245 C1orf43Q9BWL3 253 aa17.37■□□□□ 0.37
HLA-C-208ENST00000487245 TRAV23DV6A0A075B6W5 121 aa17.35■□□□□ 0.37
HLA-C-208ENST00000487245 TRBV10-3A0A0K0K1G6 114 aa17.35■□□□□ 0.37
HLA-C-208ENST00000487245 TRBV7-6A0A0J9YX20 115 aa17.34■□□□□ 0.37
HLA-C-208ENST00000487245 HIGD2BQ4VC39 106 aa17.34■□□□□ 0.37
HLA-C-208ENST00000487245 C9orf153Q5TBE3 101 aa17.34■□□□□ 0.37
HLA-C-208ENST00000487245 DIRC1Q969H9 104 aa17.34■□□□□ 0.37
HLA-C-208ENST00000487245 RBM3P98179 157 aaKnown RBP17.33■□□□□ 0.37
HLA-C-208ENST00000487245 Q6ZQT0 140 aa17.33■□□□□ 0.36
HLA-C-208ENST00000487245 C15orf56Q8N910 161 aa17.32■□□□□ 0.36
HLA-C-208ENST00000487245 XAGE1AQ9HD64 81 aa17.31■□□□□ 0.36
HLA-C-208ENST00000487245 TRAV10A0A0B4J240 114 aa17.3■□□□□ 0.36
HLA-C-208ENST00000487245 VPREB1P12018 145 aa17.3■□□□□ 0.36
HLA-C-208ENST00000487245 DNAH10OSP0CZ25 163 aa17.29■□□□□ 0.36
HLA-C-208ENST00000487245 ZNF73O43830 326 aaPredicted RBP17.28■□□□□ 0.36
HLA-C-208ENST00000487245 PDE6GP18545 87 aa17.28■□□□□ 0.36
HLA-C-208ENST00000487245 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP17.28■□□□□ 0.36
HLA-C-208ENST00000487245 Q6ZRU5 148 aa17.28■□□□□ 0.36
HLA-C-208ENST00000487245 Q6ZQY7 126 aa17.27■□□□□ 0.36
HLA-C-208ENST00000487245 UBL5Q9BZL1 73 aa17.27■□□□□ 0.36
HLA-C-208ENST00000487245 IGKV2D-24A0A075B6R9 120 aa17.27■□□□□ 0.35
HLA-C-208ENST00000487245 CRYGAP11844 174 aa17.27■□□□□ 0.35
HLA-C-208ENST00000487245 COX7BP24311 80 aa17.27■□□□□ 0.35
HLA-C-208ENST00000487245 NDUFC2-KCTD14E9PQ53 114 aa17.26■□□□□ 0.35
HLA-C-208ENST00000487245 M0R378 163 aa17.26■□□□□ 0.35
HLA-C-208ENST00000487245 GHRHP01286 108 aa17.26■□□□□ 0.35
HLA-C-208ENST00000487245 ELOF1P60002 83 aaKnown RBP17.26■□□□□ 0.35
HLA-C-208ENST00000487245 LAMTOR3Q9UHA4 124 aa17.26■□□□□ 0.35
HLA-C-208ENST00000487245 A0A087WVE0 104 aa17.24■□□□□ 0.35
HLA-C-208ENST00000487245 USP17L23D6RBM5 183 aa17.24■□□□□ 0.35
HLA-C-208ENST00000487245 TM2D3Q9BRN9 247 aa17.24■□□□□ 0.35
HLA-C-208ENST00000487245 SERP2Q8N6R1 65 aa17.22■□□□□ 0.35
HLA-C-208ENST00000487245 DSCR8Q96T75 97 aa17.2■□□□□ 0.34
HLA-C-208ENST00000487245 SYCNQ0VAF6 134 aa17.19■□□□□ 0.34
HLA-C-208ENST00000487245 CMYA5Q8N3K9 4069 aa17.18■□□□□ 0.34
HLA-C-208ENST00000487245 FBN1P35555 2871 aaKnown RBP17.16■□□□□ 0.34
HLA-C-208ENST00000487245 DNAH3Q8TD57 4116 aa17.15■□□□□ 0.34
HLA-C-208ENST00000487245 TRBV7-4A0A0J9YYF1 115 aa17.14■□□□□ 0.33
HLA-C-208ENST00000487245 LINC00588Q9Y4M8 146 aa17.14■□□□□ 0.33
HLA-C-208ENST00000487245 STAB1Q9NY15 2570 aa17.14■□□□□ 0.33
HLA-C-208ENST00000487245 K7EIL1 84 aa17.14■□□□□ 0.33
HLA-C-208ENST00000487245 LINC00528Q8N1L1 170 aa17.14■□□□□ 0.33
HLA-C-208ENST00000487245 UPK3BQ9BT76 320 aa17.13■□□□□ 0.33
HLA-C-208ENST00000487245 Q6ZRP5 223 aa17.12■□□□□ 0.33
HLA-C-208ENST00000487245 RMI2Q96E14 147 aa17.12■□□□□ 0.33
HLA-C-208ENST00000487245 M0R2N4 97 aa17.11■□□□□ 0.33
HLA-C-208ENST00000487245 PRB2P02812 416 aaPredicted RBP17.11■□□□□ 0.33
HLA-C-208ENST00000487245 FAM19A1Q7Z5A9 133 aa17.11■□□□□ 0.33
HLA-C-208ENST00000487245 SMIM20Q8N5G0 67 aa17.11■□□□□ 0.33
HLA-C-208ENST00000487245 Q6ZVQ6 151 aa17.09■□□□□ 0.33
HLA-C-208ENST00000487245 BCE1O60756 84 aa17.08■□□□□ 0.33
HLA-C-208ENST00000487245 TLX1NBP0CAT3 122 aa17.08■□□□□ 0.33
HLA-C-208ENST00000487245 MRAPQ8TCY5 172 aa17.08■□□□□ 0.33
HLA-C-208ENST00000487245 TENM3Q9P273 2699 aa17.07■□□□□ 0.32
HLA-C-208ENST00000487245 LINC01547P58512 204 aaPredicted RBP17.06■□□□□ 0.32
HLA-C-208ENST00000487245 CXCL6P80162 114 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 99.1 ms