RNA–Protein interactions for RNA: ENST00000487068.1

NEK4-204, Transcript of NIMA related kinase 4, humanhuman

TSL 2

Gene NEK4, Length 631 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-204ENST00000487068 HERVK_113P61574 105 aa6.32□□□□□ -1.4
NEK4-204ENST00000487068 MEIG1Q5JSS6 88 aa6.32□□□□□ -1.4
NEK4-204ENST00000487068 HMCN2Q8NDA2 5059 aa6.32□□□□□ -1.4
NEK4-204ENST00000487068 A0A0U1RRA0 63 aa6.31□□□□□ -1.4
NEK4-204ENST00000487068 DPM2O94777 84 aa6.31□□□□□ -1.4
NEK4-204ENST00000487068 LINC00158P58513 81 aa6.31□□□□□ -1.4
NEK4-204ENST00000487068 LBHQ53QV2 105 aaPredicted RBP6.31□□□□□ -1.4
NEK4-204ENST00000487068 SPINK6Q6UWN8 80 aa6.31□□□□□ -1.4
NEK4-204ENST00000487068 PKHD1L1Q86WI1 4243 aa6.31□□□□□ -1.4
NEK4-204ENST00000487068 GAGE10A6NGK3 116 aa6.3□□□□□ -1.4
NEK4-204ENST00000487068 SCGB1D1O95968 90 aa6.3□□□□□ -1.4
NEK4-204ENST00000487068 IGKCP01834 107 aa6.3□□□□□ -1.4
NEK4-204ENST00000487068 S100A1P23297 94 aa6.3□□□□□ -1.4
NEK4-204ENST00000487068 COX17Q14061 63 aa6.3□□□□□ -1.4
NEK4-204ENST00000487068 REG3GQ6UW15 175 aa6.3□□□□□ -1.4
NEK4-204ENST00000487068 MRPL55Q7Z7F7 128 aaKnown RBP6.3□□□□□ -1.4
NEK4-204ENST00000487068 KRTAP7-1Q8IUC3 87 aa6.3□□□□□ -1.4
NEK4-204ENST00000487068 C22orf24Q9Y442 160 aa6.3□□□□□ -1.4
NEK4-204ENST00000487068 TRIAP1O43715 76 aa6.29□□□□□ -1.4
NEK4-204ENST00000487068 SND1-IT1Q9HBX3 110 aa6.29□□□□□ -1.4
NEK4-204ENST00000487068 NDUFA12Q9UI09 145 aa6.29□□□□□ -1.4
NEK4-204ENST00000487068 MYMXA0A1B0GTQ4 84 aa6.28□□□□□ -1.4
NEK4-204ENST00000487068 RPL37AP8A6NKH3 93 aa6.28□□□□□ -1.4
NEK4-204ENST00000487068 IGLV7-43P04211 117 aa6.28□□□□□ -1.4
NEK4-204ENST00000487068 LGALS3P17931 250 aaKnown RBP6.28□□□□□ -1.4
NEK4-204ENST00000487068 HERV-K104P63124 156 aa6.28□□□□□ -1.4
NEK4-204ENST00000487068 KRTAP11-1Q8IUC1 163 aa6.28□□□□□ -1.4
NEK4-204ENST00000487068 PLEKHB2Q96CS7 222 aa6.28□□□□□ -1.4
NEK4-204ENST00000487068 TP73-AS1Q9UF72 201 aa6.28□□□□□ -1.4
NEK4-204ENST00000487068 SYS1-DBNDD2H3BUS1 97 aa6.27□□□□□ -1.41
NEK4-204ENST00000487068 LEPROTO15243 131 aa6.27□□□□□ -1.41
NEK4-204ENST00000487068 SMIM13P0DJ93 91 aa6.27□□□□□ -1.41
NEK4-204ENST00000487068 RPL24P83731 157 aaKnown RBP6.27□□□□□ -1.41
NEK4-204ENST00000487068 LRP1Q07954 4544 aaKnown RBP6.27□□□□□ -1.41
NEK4-204ENST00000487068 IGKV2-28A0A075B6P5 120 aa6.26□□□□□ -1.41
NEK4-204ENST00000487068 J3QQQ9 107 aa6.26□□□□□ -1.41
NEK4-204ENST00000487068 IGKV2D-28P01615 120 aa6.26□□□□□ -1.41
NEK4-204ENST00000487068 PCP4P48539 62 aa6.26□□□□□ -1.41
NEK4-204ENST00000487068 KRTDAPP60985 99 aa6.26□□□□□ -1.41
NEK4-204ENST00000487068 DIRC1Q969H9 104 aa6.26□□□□□ -1.41
NEK4-204ENST00000487068 LINC00167Q96N53 147 aa6.26□□□□□ -1.41
NEK4-204ENST00000487068 LINC00587B1AMM8 73 aa6.25□□□□□ -1.41
NEK4-204ENST00000487068 TSPEAR-AS2P59090 65 aa6.25□□□□□ -1.41
NEK4-204ENST00000487068 MIR7-3HGQ8N6C7 128 aa6.25□□□□□ -1.41
NEK4-204ENST00000487068 IGLV5-37A0A075B6J1 123 aa6.24□□□□□ -1.41
NEK4-204ENST00000487068 C20orf202A1L168 122 aa6.24□□□□□ -1.41
NEK4-204ENST00000487068 VPREB1P12018 145 aa6.24□□□□□ -1.41
NEK4-204ENST00000487068 SRSF9Q13242 221 aaKnown RBP eCLIP6.24□□□□□ -1.41
NEK4-204ENST00000487068 PET117Q6UWS5 81 aa6.24□□□□□ -1.41
NEK4-204ENST00000487068 MIEN1Q9BRT3 115 aa6.24□□□□□ -1.41
NEK4-204ENST00000487068 FAT3Q8TDW7 4589 aa6.23□□□□□ -1.41
NEK4-204ENST00000487068 H0Y9J4 135 aa6.23□□□□□ -1.41
NEK4-204ENST00000487068 C3orf79P0CE67 100 aa6.23□□□□□ -1.41
NEK4-204ENST00000487068 NMUP48645 174 aa6.23□□□□□ -1.41
NEK4-204ENST00000487068 UBE2AP49459 152 aa6.23□□□□□ -1.41
NEK4-204ENST00000487068 BOD1L2Q8IYS8 172 aa6.23□□□□□ -1.41
NEK4-204ENST00000487068 NCR3O14931 201 aa6.22□□□□□ -1.41
NEK4-204ENST00000487068 BCE1O60756 84 aa6.22□□□□□ -1.41
NEK4-204ENST00000487068 S100A6P06703 90 aa6.22□□□□□ -1.41
NEK4-204ENST00000487068 S100A2P29034 98 aa6.22□□□□□ -1.41
NEK4-204ENST00000487068 RPL28P46779 137 aaKnown RBP6.22□□□□□ -1.41
NEK4-204ENST00000487068 COA6Q5JTJ3 125 aaKnown RBP6.22□□□□□ -1.41
NEK4-204ENST00000487068 LINC01545Q5VT33 79 aa6.22□□□□□ -1.41
NEK4-204ENST00000487068 DAND5Q8N907 189 aa6.22□□□□□ -1.41
NEK4-204ENST00000487068 LINC01600Q96MT4 127 aa6.22□□□□□ -1.41
NEK4-204ENST00000487068 E9PLD3 99 aa6.21□□□□□ -1.42
NEK4-204ENST00000487068 ZNF861PO60384 105 aa6.2□□□□□ -1.42
NEK4-204ENST00000487068 MT1HL1P0DM35 61 aa6.2□□□□□ -1.42
NEK4-204ENST00000487068 NPC2P61916 151 aa6.2□□□□□ -1.42
NEK4-204ENST00000487068 FAM19A1Q7Z5A9 133 aa6.2□□□□□ -1.42
NEK4-204ENST00000487068 Q8NDZ9 215 aa6.2□□□□□ -1.42
NEK4-204ENST00000487068 IGLV1-50A0A075B6I6 118 aa6.19□□□□□ -1.42
NEK4-204ENST00000487068 TMEM238C9JI98 176 aa6.19□□□□□ -1.42
NEK4-204ENST00000487068 M0R378 163 aa6.19□□□□□ -1.42
NEK4-204ENST00000487068 ATOH7Q8N100 152 aa6.19□□□□□ -1.42
NEK4-204ENST00000487068 TMEM126AQ9H061 195 aa6.19□□□□□ -1.42
NEK4-204ENST00000487068 ZNF815PA8K554 130 aa6.18□□□□□ -1.42
NEK4-204ENST00000487068 S100A12P80511 92 aa6.18□□□□□ -1.42
NEK4-204ENST00000487068 PRLHP81277 87 aa6.18□□□□□ -1.42
NEK4-204ENST00000487068 A0A0J9YXY3 114 aa6.17□□□□□ -1.42
NEK4-204ENST00000487068 PRR26Q8N8Z3 221 aa6.17□□□□□ -1.42
NEK4-204ENST00000487068 IGKV2D-26A0A0A0MRZ7 120 aa6.16□□□□□ -1.42
NEK4-204ENST00000487068 AKR1D1P51857 326 aa6.16□□□□□ -1.42
NEK4-204ENST00000487068 SCGB1D4Q6XE38 83 aa6.16□□□□□ -1.42
NEK4-204ENST00000487068 HIST3H2BBQ8N257 126 aa6.16□□□□□ -1.42
NEK4-204ENST00000487068 TTTY13Q9BZ97 58 aa6.16□□□□□ -1.42
NEK4-204ENST00000487068 PRYO14603 147 aa6.15□□□□□ -1.42
NEK4-204ENST00000487068 S100A7L2Q5SY68 101 aa6.15□□□□□ -1.42
NEK4-204ENST00000487068 HIGD2AQ9BW72 106 aa6.15□□□□□ -1.42
NEK4-204ENST00000487068 SPANXB1Q9NS25 103 aaPredicted RBP6.15□□□□□ -1.42
NEK4-204ENST00000487068 TRBV10-3A0A0K0K1G6 114 aa6.14□□□□□ -1.43
NEK4-204ENST00000487068 ETDCA0A1B0GVM5 59 aa6.14□□□□□ -1.43
NEK4-204ENST00000487068 RPL13AP40429 203 aaKnown RBP6.14□□□□□ -1.43
NEK4-204ENST00000487068 HIST1H2BLQ99880 126 aa6.14□□□□□ -1.43
NEK4-204ENST00000487068 HSBP1L1C9JCN9 74 aa6.13□□□□□ -1.43
NEK4-204ENST00000487068 KRTAP1-4P0C5Y4 121 aa6.13□□□□□ -1.43
NEK4-204ENST00000487068 DDTP30046 118 aa6.13□□□□□ -1.43
NEK4-204ENST00000487068 TIMM17BO60830 172 aa6.12□□□□□ -1.43
NEK4-204ENST00000487068 KRTAP10-8P60410 259 aa6.12□□□□□ -1.43
NEK4-204ENST00000487068 SNRPEP62304 92 aaKnown RBP6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms