RNA–Protein interactions for RNA: ENST00000487010.1

COL3A1-206, Transcript of collagen type III alpha 1 chain, humanhuman

TSL 2

Gene COL3A1, Length 2,054 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-206ENST00000487010 FLNAP21333 2647 aaKnown RBP8.26□□□□□ -1.09
COL3A1-206ENST00000487010 DSCR8Q96T75 97 aa8.26□□□□□ -1.09
COL3A1-206ENST00000487010 FN1P02751 2386 aaKnown RBP8.25□□□□□ -1.09
COL3A1-206ENST00000487010 CYSRT1A8MQ03 144 aa8.25□□□□□ -1.09
COL3A1-206ENST00000487010 M0R2N4 97 aa8.25□□□□□ -1.09
COL3A1-206ENST00000487010 NDUFC2-KCTD14E9PQ53 114 aa8.24□□□□□ -1.09
COL3A1-206ENST00000487010 OXTP01178 125 aa8.24□□□□□ -1.09
COL3A1-206ENST00000487010 DAD1P61803 113 aa8.24□□□□□ -1.09
COL3A1-206ENST00000487010 SETD2Q9BYW2 2564 aaPredicted RBP8.24□□□□□ -1.09
COL3A1-206ENST00000487010 DEFB135Q30KP9 77 aa8.23□□□□□ -1.09
COL3A1-206ENST00000487010 H3BQ85 93 aa8.23□□□□□ -1.09
COL3A1-206ENST00000487010 BCE1O60756 84 aa8.23□□□□□ -1.09
COL3A1-206ENST00000487010 LINC01547P58512 204 aaPredicted RBP8.23□□□□□ -1.09
COL3A1-206ENST00000487010 Q6ZQY7 126 aa8.23□□□□□ -1.09
COL3A1-206ENST00000487010 PDE6GP18545 87 aa8.22□□□□□ -1.09
COL3A1-206ENST00000487010 C5orf47Q569G3 176 aa8.22□□□□□ -1.09
COL3A1-206ENST00000487010 LELP1Q5T871 98 aa8.22□□□□□ -1.09
COL3A1-206ENST00000487010 Q6ZVQ6 151 aa8.22□□□□□ -1.09
COL3A1-206ENST00000487010 CCDC168Q8NDH2 2452 aa8.22□□□□□ -1.09
COL3A1-206ENST00000487010 GVQW2A0A096LPI5 108 aaPredicted RBP8.22□□□□□ -1.09
COL3A1-206ENST00000487010 C9orf66Q5T8R8 295 aa8.22□□□□□ -1.09
COL3A1-206ENST00000487010 C20orf197Q8N268 126 aa8.22□□□□□ -1.09
COL3A1-206ENST00000487010 SPATA3Q8NHX4 192 aa8.22□□□□□ -1.09
COL3A1-206ENST00000487010 PRR34Q9NV39 138 aa8.22□□□□□ -1.09
COL3A1-206ENST00000487010 CELA1Q9UNI1 258 aa8.21□□□□□ -1.1
COL3A1-206ENST00000487010 TRAV7A0A075B6U4 112 aa8.2□□□□□ -1.1
COL3A1-206ENST00000487010 HAMPP81172 84 aa8.2□□□□□ -1.1
COL3A1-206ENST00000487010 KLK12Q9UKR0 248 aa8.2□□□□□ -1.1
COL3A1-206ENST00000487010 DIRC1Q969H9 104 aa8.2□□□□□ -1.1
COL3A1-206ENST00000487010 PDZD2O15018 2839 aa8.19□□□□□ -1.1
COL3A1-206ENST00000487010 APOC4P55056 127 aa8.19□□□□□ -1.1
COL3A1-206ENST00000487010 C6orf48Q9UBA6 75 aa8.19□□□□□ -1.1
COL3A1-206ENST00000487010 CXCL6P80162 114 aa8.18□□□□□ -1.1
COL3A1-206ENST00000487010 LCE2DQ5TA82 110 aaPredicted RBP8.18□□□□□ -1.1
COL3A1-206ENST00000487010 Q8NAQ8 132 aa8.18□□□□□ -1.1
COL3A1-206ENST00000487010 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.18□□□□□ -1.1
COL3A1-206ENST00000487010 XAGE1AQ9HD64 81 aa8.18□□□□□ -1.1
COL3A1-206ENST00000487010 HTN3P15516 51 aa8.17□□□□□ -1.1
COL3A1-206ENST00000487010 TRAV10A0A0B4J240 114 aa8.17□□□□□ -1.1
COL3A1-206ENST00000487010 TRBV7-4A0A0J9YYF1 115 aa8.17□□□□□ -1.1
COL3A1-206ENST00000487010 ZNF73O43830 326 aaPredicted RBP8.17□□□□□ -1.1
COL3A1-206ENST00000487010 MIFP14174 115 aa8.17□□□□□ -1.1
COL3A1-206ENST00000487010 COX7BP24311 80 aa8.17□□□□□ -1.1
COL3A1-206ENST00000487010 SMR3AQ99954 134 aa8.17□□□□□ -1.1
COL3A1-206ENST00000487010 SPART-AS1P0CW21 52 aa8.16□□□□□ -1.1
COL3A1-206ENST00000487010 ACANP16112 2415 aa8.16□□□□□ -1.1
COL3A1-206ENST00000487010 ELOF1P60002 83 aaKnown RBP8.15□□□□□ -1.1
COL3A1-206ENST00000487010 TRBV7-6A0A0J9YX20 115 aa8.15□□□□□ -1.11
COL3A1-206ENST00000487010 FAM236DA0A1B0GTK5 79 aa8.15□□□□□ -1.11
COL3A1-206ENST00000487010 H7BZZ5 65 aa8.15□□□□□ -1.11
COL3A1-206ENST00000487010 FAM236CP0DP71 79 aa8.15□□□□□ -1.11
COL3A1-206ENST00000487010 Q5XG85 94 aa8.15□□□□□ -1.11
COL3A1-206ENST00000487010 GCN1Q92616 2671 aaKnown RBP8.15□□□□□ -1.11
COL3A1-206ENST00000487010 NBEAL2Q6ZNJ1 2754 aa8.14□□□□□ -1.11
COL3A1-206ENST00000487010 KLKP1Q107X0 134 aa8.14□□□□□ -1.11
COL3A1-206ENST00000487010 MTORP42345 2549 aa8.13□□□□□ -1.11
COL3A1-206ENST00000487010 VPREB1P12018 145 aa8.13□□□□□ -1.11
COL3A1-206ENST00000487010 C4orf26Q17RF5 130 aa8.13□□□□□ -1.11
COL3A1-206ENST00000487010 TENM4Q6N022 2769 aa8.12□□□□□ -1.11
COL3A1-206ENST00000487010 EPM2AB3EWF7 344 aa8.1□□□□□ -1.11
COL3A1-206ENST00000487010 M0R378 163 aa8.1□□□□□ -1.11
COL3A1-206ENST00000487010 HIGD2BQ4VC39 106 aa8.1□□□□□ -1.11
COL3A1-206ENST00000487010 SCXQ7RTU7 201 aa8.1□□□□□ -1.11
COL3A1-206ENST00000487010 CAMK2N2Q96S95 79 aa8.1□□□□□ -1.11
COL3A1-206ENST00000487010 SERP1Q9Y6X1 66 aa8.1□□□□□ -1.11
COL3A1-206ENST00000487010 EGFEM1PQ0D2K5 195 aa8.09□□□□□ -1.11
COL3A1-206ENST00000487010 RMI2Q96E14 147 aa8.09□□□□□ -1.11
COL3A1-206ENST00000487010 SNURFQ9Y675 71 aa8.09□□□□□ -1.11
COL3A1-206ENST00000487010 LINC00528Q8N1L1 170 aa8.09□□□□□ -1.11
COL3A1-206ENST00000487010 KRTAP26-1Q6PEX3 210 aa8.08□□□□□ -1.12
COL3A1-206ENST00000487010 HRCT1Q6UXD1 115 aa8.08□□□□□ -1.12
COL3A1-206ENST00000487010 TM2D3Q9BRN9 247 aa8.08□□□□□ -1.12
COL3A1-206ENST00000487010 Q6ZRU5 148 aa8.07□□□□□ -1.12
COL3A1-206ENST00000487010 WFDC10BQ8IUB3 73 aa8.07□□□□□ -1.12
COL3A1-206ENST00000487010 F8WEM9 126 aa8.06□□□□□ -1.12
COL3A1-206ENST00000487010 WIPF1O43516 503 aa8.06□□□□□ -1.12
COL3A1-206ENST00000487010 C15orf56Q8N910 161 aa8.06□□□□□ -1.12
COL3A1-206ENST00000487010 HIVEP2P31629 2446 aa8.05□□□□□ -1.12
COL3A1-206ENST00000487010 NDUFC1O43677 76 aa8.04□□□□□ -1.12
COL3A1-206ENST00000487010 ITPR2Q14571 2701 aa8.04□□□□□ -1.12
COL3A1-206ENST00000487010 J3QKU1 62 aa8.04□□□□□ -1.12
COL3A1-206ENST00000487010 BPY2O14599 106 aa8.04□□□□□ -1.12
COL3A1-206ENST00000487010 NREPQ16612 68 aa8.04□□□□□ -1.12
COL3A1-206ENST00000487010 VWFP04275 2813 aa8.04□□□□□ -1.12
COL3A1-206ENST00000487010 KPRPQ5T749 579 aaPredicted RBP8.03□□□□□ -1.12
COL3A1-206ENST00000487010 H3BNG1 76 aa8.02□□□□□ -1.12
COL3A1-206ENST00000487010 Q6ZRP5 223 aa8.02□□□□□ -1.12
COL3A1-206ENST00000487010 INAFM1C9JVW0 142 aa8.01□□□□□ -1.13
COL3A1-206ENST00000487010 IGKV4-1P06312 121 aa8.01□□□□□ -1.13
COL3A1-206ENST00000487010 ERC2-IT1O76042 136 aa8.01□□□□□ -1.13
COL3A1-206ENST00000487010 Q8N9L7 120 aa8.01□□□□□ -1.13
COL3A1-206ENST00000487010 TMEM254Q8TBM7 123 aa8□□□□□ -1.13
COL3A1-206ENST00000487010 KCNQ1DNQ9H478 68 aa7.99□□□□□ -1.13
COL3A1-206ENST00000487010 F8WDY8 70 aa7.99□□□□□ -1.13
COL3A1-206ENST00000487010 ATP5EP56381 51 aaPredicted RBP7.99□□□□□ -1.13
COL3A1-206ENST00000487010 SMIM26A0A096LP01 95 aa7.98□□□□□ -1.13
COL3A1-206ENST00000487010 C1orf43Q9BWL3 253 aa7.98□□□□□ -1.13
COL3A1-206ENST00000487010 ESRGQ1W209 222 aa7.98□□□□□ -1.13
COL3A1-206ENST00000487010 Q8N377 158 aa7.98□□□□□ -1.13
COL3A1-206ENST00000487010 C3orf84H3BNL1 204 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms