RNA–Protein interactions for RNA: ENST00000486711.1

SMC4-218, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 621 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-218ENST00000486711 LINC00312Q9Y6C7 94 aa0.65□□□□□ -2.31
SMC4-218ENST00000486711 HELZP42694 1942 aaKnown RBP0.65□□□□□ -2.31
SMC4-218ENST00000486711 PCNTO95613 3336 aa0.64□□□□□ -2.31
SMC4-218ENST00000486711 MYMXA0A1B0GTQ4 84 aa0.64□□□□□ -2.31
SMC4-218ENST00000486711 F8VRH5 84 aa0.64□□□□□ -2.31
SMC4-218ENST00000486711 SYS1-DBNDD2H3BUS1 97 aa0.64□□□□□ -2.31
SMC4-218ENST00000486711 H3BUX3 64 aa0.64□□□□□ -2.31
SMC4-218ENST00000486711 K7EP34 96 aa0.64□□□□□ -2.31
SMC4-218ENST00000486711 M0R1W7 72 aa0.64□□□□□ -2.31
SMC4-218ENST00000486711 PYYP10082 97 aa0.64□□□□□ -2.31
SMC4-218ENST00000486711 FCER1GP30273 86 aa0.64□□□□□ -2.31
SMC4-218ENST00000486711 NPC2P61916 151 aa0.64□□□□□ -2.31
SMC4-218ENST00000486711 TDRG1Q3Y452 100 aa0.64□□□□□ -2.31
SMC4-218ENST00000486711 MEIG1Q5JSS6 88 aa0.64□□□□□ -2.31
SMC4-218ENST00000486711 LINC01590Q5TEZ4 76 aa0.64□□□□□ -2.31
SMC4-218ENST00000486711 FAM74A4Q5TZK3 123 aa0.64□□□□□ -2.31
SMC4-218ENST00000486711 ZNF818PQ6ZRF7 136 aa0.64□□□□□ -2.31
SMC4-218ENST00000486711 C14orf144Q96I85 54 aa0.64□□□□□ -2.31
SMC4-218ENST00000486711 ARHGAP5-AS1Q96IT6 56 aa0.64□□□□□ -2.31
SMC4-218ENST00000486711 SMR3AQ99954 134 aa0.64□□□□□ -2.31
SMC4-218ENST00000486711 SMIM2Q9BVW6 85 aa0.64□□□□□ -2.31
SMC4-218ENST00000486711 SMIM3Q9BZL3 60 aa0.64□□□□□ -2.31
SMC4-218ENST00000486711 DPH3P1Q9H4G8 78 aa0.64□□□□□ -2.31
SMC4-218ENST00000486711 KAAG1Q9UBP8 84 aa0.64□□□□□ -2.31
SMC4-218ENST00000486711 BPTFQ12830 3046 aa0.63□□□□□ -2.31
SMC4-218ENST00000486711 KNTC1P50748 2209 aa0.63□□□□□ -2.31
SMC4-218ENST00000486711 A0A096LNT2 108 aa0.63□□□□□ -2.31
SMC4-218ENST00000486711 IGLC7A0M8Q6 106 aa0.63□□□□□ -2.31
SMC4-218ENST00000486711 I3L3M4 83 aa0.63□□□□□ -2.31
SMC4-218ENST00000486711 NDUFA4O00483 81 aa0.63□□□□□ -2.31
SMC4-218ENST00000486711 NPFFO15130 113 aa0.63□□□□□ -2.31
SMC4-218ENST00000486711 SPINK8P0C7L1 97 aa0.63□□□□□ -2.31
SMC4-218ENST00000486711 PIRTP0C851 137 aa0.63□□□□□ -2.31
SMC4-218ENST00000486711 IGLC2P0DOY2 106 aa0.63□□□□□ -2.31
SMC4-218ENST00000486711 IGLC3P0DOY3 106 aa0.63□□□□□ -2.31
SMC4-218ENST00000486711 IAPPP10997 89 aa0.63□□□□□ -2.31
SMC4-218ENST00000486711 GCHFRP30047 84 aa0.63□□□□□ -2.31
SMC4-218ENST00000486711 CCL8P80075 99 aa0.63□□□□□ -2.31
SMC4-218ENST00000486711 DEFB114Q30KQ6 69 aa0.63□□□□□ -2.31
SMC4-218ENST00000486711 MIC13Q5XKP0 118 aa0.63□□□□□ -2.31
SMC4-218ENST00000486711 LINC00643Q86TS7 51 aa0.63□□□□□ -2.31
SMC4-218ENST00000486711 Q8N8P6 123 aa0.63□□□□□ -2.31
SMC4-218ENST00000486711 SPTSSBQ8NFR3 76 aa0.63□□□□□ -2.31
SMC4-218ENST00000486711 TMEM167AQ8TBQ9 72 aa0.63□□□□□ -2.31
SMC4-218ENST00000486711 C18orf32Q8TCD1 76 aa0.63□□□□□ -2.31
SMC4-218ENST00000486711 PRR15LQ9BU68 103 aa0.63□□□□□ -2.31
SMC4-218ENST00000486711 CNFNQ9BYD5 112 aa0.63□□□□□ -2.31
SMC4-218ENST00000486711 PRO1854Q9UHT4 67 aa0.63□□□□□ -2.31
SMC4-218ENST00000486711 ASH1LQ9NR48 2969 aaKnown RBP0.62□□□□□ -2.31
SMC4-218ENST00000486711 TRBV25-1A0A075B6N4 114 aa0.62□□□□□ -2.31
SMC4-218ENST00000486711 LINC01546A6NGU7 62 aa0.62□□□□□ -2.31
SMC4-218ENST00000486711 F8WEM9 126 aa0.62□□□□□ -2.31
SMC4-218ENST00000486711 H3BUT2 72 aa0.62□□□□□ -2.31
SMC4-218ENST00000486711 H3BVH4 76 aa0.62□□□□□ -2.31
SMC4-218ENST00000486711 PIN1P1O15428 100 aa0.62□□□□□ -2.31
SMC4-218ENST00000486711 C3orf79P0CE67 100 aa0.62□□□□□ -2.31
SMC4-218ENST00000486711 IGLC6P0CF74 106 aa0.62□□□□□ -2.31
SMC4-218ENST00000486711 IGLC1P0CG04 106 aa0.62□□□□□ -2.31
SMC4-218ENST00000486711 CCL18P55774 89 aa0.62□□□□□ -2.31
SMC4-218ENST00000486711 UBE2D2P62837 147 aa0.62□□□□□ -2.31
SMC4-218ENST00000486711 INSL4Q14641 139 aa0.62□□□□□ -2.31
SMC4-218ENST00000486711 C9orf153Q5TBE3 101 aa0.62□□□□□ -2.31
SMC4-218ENST00000486711 LINC01600Q96MT4 127 aa0.62□□□□□ -2.31
SMC4-218ENST00000486711 AMELXQ99217 191 aa0.62□□□□□ -2.31
SMC4-218ENST00000486711 CYP4F30PQ9H0H9 118 aa0.62□□□□□ -2.31
SMC4-218ENST00000486711 TP53AIP1Q9HCN2 124 aa0.62□□□□□ -2.31
SMC4-218ENST00000486711 NDUFA4L2Q9NRX3 87 aa0.62□□□□□ -2.31
SMC4-218ENST00000486711 LINC00474Q9P2X8 69 aa0.62□□□□□ -2.31
SMC4-218ENST00000486711 UBE2D4Q9Y2X8 147 aa0.62□□□□□ -2.31
SMC4-218ENST00000486711 V9GYV3 84 aa0.62□□□□□ -2.31
SMC4-218ENST00000486711 SPAG17Q6Q759 2223 aa0.62□□□□□ -2.31
SMC4-218ENST00000486711 SRCAPQ6ZRS2 3230 aa0.62□□□□□ -2.31
SMC4-218ENST00000486711 EP400Q96L91 3159 aa0.61□□□□□ -2.31
SMC4-218ENST00000486711 TRBV7-3A0A075B6L6 115 aa0.61□□□□□ -2.31
SMC4-218ENST00000486711 TRBV7-7A0A0K0K1E9 115 aa0.61□□□□□ -2.31
SMC4-218ENST00000486711 D6R8Y8 96 aa0.61□□□□□ -2.31
SMC4-218ENST00000486711 H3BNG1 76 aa0.61□□□□□ -2.31
SMC4-218ENST00000486711 K7EIM0 57 aa0.61□□□□□ -2.31
SMC4-218ENST00000486711 CCL22O00626 93 aa0.61□□□□□ -2.31
SMC4-218ENST00000486711 NDUFA3O95167 84 aa0.61□□□□□ -2.31
SMC4-218ENST00000486711 SAA2P0DJI9 122 aaPredicted RBP0.61□□□□□ -2.31
SMC4-218ENST00000486711 ELOF1P60002 83 aaKnown RBP0.61□□□□□ -2.31
SMC4-218ENST00000486711 RBM3P98179 157 aaKnown RBP0.61□□□□□ -2.31
SMC4-218ENST00000486711 KLK9Q2XQG4 91 aa0.61□□□□□ -2.31
SMC4-218ENST00000486711 DEFB133Q30KQ1 61 aa0.61□□□□□ -2.31
SMC4-218ENST00000486711 PIGYQ3MUY2 71 aa0.61□□□□□ -2.31
SMC4-218ENST00000486711 ETDBQ3ZM63 59 aa0.61□□□□□ -2.31
SMC4-218ENST00000486711 CFAP126Q5VTH2 177 aa0.61□□□□□ -2.31
SMC4-218ENST00000486711 Q6ZUT4 128 aa0.61□□□□□ -2.31
SMC4-218ENST00000486711 RPS27LQ71UM5 84 aaKnown RBP0.61□□□□□ -2.31
SMC4-218ENST00000486711 SERP2Q8N6R1 65 aa0.61□□□□□ -2.31
SMC4-218ENST00000486711 SNHG12Q9BXW3 62 aa0.61□□□□□ -2.31
SMC4-218ENST00000486711 SERP1Q9Y6X1 66 aa0.61□□□□□ -2.31
SMC4-218ENST00000486711 DOCK11Q5JSL3 2073 aa0.61□□□□□ -2.31
SMC4-218ENST00000486711 GOLGA4Q13439 2230 aaKnown RBP0.6□□□□□ -2.31
SMC4-218ENST00000486711 TRAV12-3A0A0B4J271 114 aa0.6□□□□□ -2.31
SMC4-218ENST00000486711 HCG22E2RYF7 251 aa0.6□□□□□ -2.31
SMC4-218ENST00000486711 NDUFA1O15239 70 aa0.6□□□□□ -2.31
SMC4-218ENST00000486711 COX6B1P14854 86 aa0.6□□□□□ -2.31
SMC4-218ENST00000486711 UBE2D1P51668 147 aa0.6□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms