RNA–Protein interactions for RNA: ENST00000486665.5

HDAC6-229, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-229ENST00000486665 DAND5Q8N907 189 aa8.12□□□□□ -1.11
HDAC6-229ENST00000486665 XAGE1AQ9HD64 81 aa8.12□□□□□ -1.11
HDAC6-229ENST00000486665 FLG2Q5D862 2391 aaPredicted RBP8.12□□□□□ -1.11
HDAC6-229ENST00000486665 TIMM17BO60830 172 aa8.11□□□□□ -1.11
HDAC6-229ENST00000486665 INAFM2P0DMQ5 153 aa8.11□□□□□ -1.11
HDAC6-229ENST00000486665 SCGB1D4Q6XE38 83 aa8.11□□□□□ -1.11
HDAC6-229ENST00000486665 SND1-IT1Q9HBX3 110 aa8.11□□□□□ -1.11
HDAC6-229ENST00000486665 PKIGQ9Y2B9 76 aa8.11□□□□□ -1.11
HDAC6-229ENST00000486665 CIRBPQ14011 172 aaKnown RBP8.1□□□□□ -1.11
HDAC6-229ENST00000486665 SLC25A34Q6PIV7 304 aa8.1□□□□□ -1.11
HDAC6-229ENST00000486665 Q6ZSA8 131 aa8.1□□□□□ -1.11
HDAC6-229ENST00000486665 SPACA4Q8TDM5 124 aa8.1□□□□□ -1.11
HDAC6-229ENST00000486665 C12orf57Q99622 126 aa8.1□□□□□ -1.11
HDAC6-229ENST00000486665 A0A1W2PNN7 141 aa8.09□□□□□ -1.11
HDAC6-229ENST00000486665 FAM168BA1KXE4 195 aa8.09□□□□□ -1.11
HDAC6-229ENST00000486665 EIF4EBP3O60516 100 aaPredicted RBP8.09□□□□□ -1.11
HDAC6-229ENST00000486665 LINC00518Q8N0U6 118 aa8.09□□□□□ -1.11
HDAC6-229ENST00000486665 DPH3Q96FX2 82 aa8.09□□□□□ -1.11
HDAC6-229ENST00000486665 PRO1933Q9H354 126 aa8.09□□□□□ -1.11
HDAC6-229ENST00000486665 NPC2P61916 151 aa8.08□□□□□ -1.12
HDAC6-229ENST00000486665 HAMPP81172 84 aa8.08□□□□□ -1.12
HDAC6-229ENST00000486665 Q5VSD8 79 aa8.08□□□□□ -1.12
HDAC6-229ENST00000486665 SOSTDC1Q6X4U4 206 aa8.08□□□□□ -1.12
HDAC6-229ENST00000486665 KRTAP7-1Q8IUC3 87 aa8.08□□□□□ -1.12
HDAC6-229ENST00000486665 Q8NDZ9 215 aa8.08□□□□□ -1.12
HDAC6-229ENST00000486665 LINC00474Q9P2X8 69 aa8.08□□□□□ -1.12
HDAC6-229ENST00000486665 A0A087WYN8 130 aa8.07□□□□□ -1.12
HDAC6-229ENST00000486665 SERTAD4-AS1Q5TG53 156 aa8.07□□□□□ -1.12
HDAC6-229ENST00000486665 C2orf91Q6ZV80 131 aa8.07□□□□□ -1.12
HDAC6-229ENST00000486665 SPANXDQ9BXN6 97 aa8.07□□□□□ -1.12
HDAC6-229ENST00000486665 SPANXCQ9NY87 97 aa8.07□□□□□ -1.12
HDAC6-229ENST00000486665 TMEM238C9JI98 176 aa8.06□□□□□ -1.12
HDAC6-229ENST00000486665 SMR3BP02814 79 aaPredicted RBP8.06□□□□□ -1.12
HDAC6-229ENST00000486665 LINC00308Q8TCZ7 52 aa8.06□□□□□ -1.12
HDAC6-229ENST00000486665 LOC107984156A0A0G2JMH3 177 aa8.05□□□□□ -1.12
HDAC6-229ENST00000486665 SCXQ7RTU7 201 aa8.05□□□□□ -1.12
HDAC6-229ENST00000486665 FAM19A5Q7Z5A7 132 aaPredicted RBP8.05□□□□□ -1.12
HDAC6-229ENST00000486665 MUSTN1Q8IVN3 82 aa8.05□□□□□ -1.12
HDAC6-229ENST00000486665 ARL17AQ8IVW1 177 aa8.05□□□□□ -1.12
HDAC6-229ENST00000486665 CIRBP-AS1Q8TBR5 109 aa8.05□□□□□ -1.12
HDAC6-229ENST00000486665 SPANXB1Q9NS25 103 aaPredicted RBP8.05□□□□□ -1.12
HDAC6-229ENST00000486665 PLAC8Q9NZF1 115 aa8.05□□□□□ -1.12
HDAC6-229ENST00000486665 HIGD1BQ9P298 99 aa8.05□□□□□ -1.12
HDAC6-229ENST00000486665 UQCR10Q9UDW1 63 aa8.05□□□□□ -1.12
HDAC6-229ENST00000486665 PRR3P79522 188 aaKnown RBP8.04□□□□□ -1.12
HDAC6-229ENST00000486665 PLA2G2DQ9UNK4 145 aa8.04□□□□□ -1.12
HDAC6-229ENST00000486665 VPREB1P12018 145 aa8.03□□□□□ -1.12
HDAC6-229ENST00000486665 SRSF9Q13242 221 aaKnown RBP eCLIP8.03□□□□□ -1.12
HDAC6-229ENST00000486665 MIEN1Q9BRT3 115 aa8.03□□□□□ -1.12
HDAC6-229ENST00000486665 Q6ZVH6 145 aa8.02□□□□□ -1.13
HDAC6-229ENST00000486665 C22orf24Q9Y442 160 aa8.02□□□□□ -1.13
HDAC6-229ENST00000486665 IGLV5-37A0A075B6J1 123 aa8.01□□□□□ -1.13
HDAC6-229ENST00000486665 IFITM1P13164 125 aa8.01□□□□□ -1.13
HDAC6-229ENST00000486665 PHF5AQ7RTV0 110 aaKnown RBP8.01□□□□□ -1.13
HDAC6-229ENST00000486665 HIST1H4GQ99525 98 aa8.01□□□□□ -1.13
HDAC6-229ENST00000486665 RPL24P83731 157 aaKnown RBP8□□□□□ -1.13
HDAC6-229ENST00000486665 M0QXV9 152 aa7.99□□□□□ -1.13
HDAC6-229ENST00000486665 GAGE10A6NGK3 116 aa7.98□□□□□ -1.13
HDAC6-229ENST00000486665 NCR3O14931 201 aa7.98□□□□□ -1.13
HDAC6-229ENST00000486665 NDUFC2O95298 119 aa7.98□□□□□ -1.13
HDAC6-229ENST00000486665 HNRNPA3P51991 378 aaKnown RBP7.98□□□□□ -1.13
HDAC6-229ENST00000486665 C7orf33Q8WU49 177 aa7.98□□□□□ -1.13
HDAC6-229ENST00000486665 LINC00167Q96N53 147 aa7.98□□□□□ -1.13
HDAC6-229ENST00000486665 PPDPFQ9H3Y8 114 aa7.98□□□□□ -1.13
HDAC6-229ENST00000486665 IGKV2-28A0A075B6P5 120 aa7.97□□□□□ -1.13
HDAC6-229ENST00000486665 TSTD3H0UI37 97 aa7.97□□□□□ -1.13
HDAC6-229ENST00000486665 IGKV2D-28P01615 120 aa7.97□□□□□ -1.13
HDAC6-229ENST00000486665 TAL2Q16559 108 aa7.97□□□□□ -1.13
HDAC6-229ENST00000486665 MRPL55Q7Z7F7 128 aaKnown RBP7.97□□□□□ -1.13
HDAC6-229ENST00000486665 KRTAP11-1Q8IUC1 163 aa7.97□□□□□ -1.13
HDAC6-229ENST00000486665 NKAPP1Q8N9T2 125 aa7.97□□□□□ -1.13
HDAC6-229ENST00000486665 COPS9Q8WXC6 57 aa7.97□□□□□ -1.13
HDAC6-229ENST00000486665 A4D1N5 150 aa7.96□□□□□ -1.14
HDAC6-229ENST00000486665 M0R378 163 aa7.96□□□□□ -1.14
HDAC6-229ENST00000486665 CEND1Q8N111 149 aa7.96□□□□□ -1.14
HDAC6-229ENST00000486665 LRP1Q07954 4544 aaKnown RBP7.96□□□□□ -1.14
HDAC6-229ENST00000486665 RPL37AP8A6NKH3 93 aa7.95□□□□□ -1.14
HDAC6-229ENST00000486665 CTAG1AP78358 180 aa7.95□□□□□ -1.14
HDAC6-229ENST00000486665 HSD52Q0P140 79 aa7.95□□□□□ -1.14
HDAC6-229ENST00000486665 LBHQ53QV2 105 aaPredicted RBP7.95□□□□□ -1.14
HDAC6-229ENST00000486665 TRBV10-2A0A0K0K1G8 114 aa7.94□□□□□ -1.14
HDAC6-229ENST00000486665 FXYD2P54710 66 aa7.93□□□□□ -1.14
HDAC6-229ENST00000486665 LINC00337Q8N6G1 96 aa7.93□□□□□ -1.14
HDAC6-229ENST00000486665 PKHD1L1Q86WI1 4243 aa7.92□□□□□ -1.14
HDAC6-229ENST00000486665 IGLV1-50A0A075B6I6 118 aa7.92□□□□□ -1.14
HDAC6-229ENST00000486665 FAM229AH3BQW9 127 aa7.92□□□□□ -1.14
HDAC6-229ENST00000486665 UBE2BP63146 152 aa7.92□□□□□ -1.14
HDAC6-229ENST00000486665 FAT3Q8TDW7 4589 aa7.91□□□□□ -1.14
HDAC6-229ENST00000486665 TRBV10-3A0A0K0K1G6 114 aa7.91□□□□□ -1.14
HDAC6-229ENST00000486665 IGLV6-57P01721 117 aa7.91□□□□□ -1.14
HDAC6-229ENST00000486665 CFC1BP0CG36 223 aa7.91□□□□□ -1.14
HDAC6-229ENST00000486665 CFC1P0CG37 223 aa7.91□□□□□ -1.14
HDAC6-229ENST00000486665 LINC00528Q8N1L1 170 aa7.91□□□□□ -1.14
HDAC6-229ENST00000486665 HMCN2Q8NDA2 5059 aa7.91□□□□□ -1.14
HDAC6-229ENST00000486665 DDTP30046 118 aa7.9□□□□□ -1.14
HDAC6-229ENST00000486665 S100A7L2Q5SY68 101 aa7.9□□□□□ -1.14
HDAC6-229ENST00000486665 BVES-AS1Q5T3Y7 98 aa7.9□□□□□ -1.14
HDAC6-229ENST00000486665 OR13C6PQ8NH95 151 aa7.9□□□□□ -1.14
HDAC6-229ENST00000486665 PSORS1C2Q9UIG4 136 aa7.9□□□□□ -1.14
HDAC6-229ENST00000486665 A6NDN8 102 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 420.1 ms