RNA–Protein interactions for RNA: ENST00000486032.1

COPS3-208, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 725 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-208ENST00000486032 J3QQQ9 107 aa3.62□□□□□ -1.83
COPS3-208ENST00000486032 CHTF8P0CG12 524 aa3.62□□□□□ -1.83
COPS3-208ENST00000486032 TSPEAR-AS2P59090 65 aa3.62□□□□□ -1.83
COPS3-208ENST00000486032 ANKRD39Q53RE8 183 aa3.62□□□□□ -1.83
COPS3-208ENST00000486032 MEIG1Q5JSS6 88 aa3.62□□□□□ -1.83
COPS3-208ENST00000486032 TTTY13Q9BZ97 58 aa3.62□□□□□ -1.83
COPS3-208ENST00000486032 NDUFA12Q9UI09 145 aa3.62□□□□□ -1.83
COPS3-208ENST00000486032 A0A096LNI7 61 aa3.61□□□□□ -1.83
COPS3-208ENST00000486032 IGKV2D-26A0A0A0MRZ7 120 aa3.61□□□□□ -1.83
COPS3-208ENST00000486032 LOC107984640A0A0U1RRK4 108 aa3.61□□□□□ -1.83
COPS3-208ENST00000486032 MYMXA0A1B0GTQ4 84 aa3.61□□□□□ -1.83
COPS3-208ENST00000486032 E9PLD3 99 aa3.61□□□□□ -1.83
COPS3-208ENST00000486032 F8WDY8 70 aa3.61□□□□□ -1.83
COPS3-208ENST00000486032 LINC00158P58513 81 aa3.61□□□□□ -1.83
COPS3-208ENST00000486032 LCE1AQ5T7P2 110 aa3.61□□□□□ -1.83
COPS3-208ENST00000486032 KRTAP5-4Q6L8H1 288 aa3.61□□□□□ -1.83
COPS3-208ENST00000486032 FAM30AQ9NZY2 134 aa3.61□□□□□ -1.83
COPS3-208ENST00000486032 TRBV30A0A0K0K1B3 111 aa3.6□□□□□ -1.83
COPS3-208ENST00000486032 ZNF815PA8K554 130 aa3.6□□□□□ -1.83
COPS3-208ENST00000486032 PANO1I0J062 215 aa3.6□□□□□ -1.83
COPS3-208ENST00000486032 SMIM13P0DJ93 91 aa3.6□□□□□ -1.83
COPS3-208ENST00000486032 JOSD1Q15040 202 aaPredicted RBP3.6□□□□□ -1.83
COPS3-208ENST00000486032 SDIM1Q6ZPB5 146 aa3.6□□□□□ -1.83
COPS3-208ENST00000486032 Q6ZRP5 223 aa3.6□□□□□ -1.83
COPS3-208ENST00000486032 XAGE1AQ9HD64 81 aa3.6□□□□□ -1.83
COPS3-208ENST00000486032 ERG28Q9UKR5 140 aa3.6□□□□□ -1.83
COPS3-208ENST00000486032 PAM16Q9Y3D7 125 aa3.6□□□□□ -1.83
COPS3-208ENST00000486032 NDUFC2-KCTD14E9PQ53 114 aa3.59□□□□□ -1.83
COPS3-208ENST00000486032 PTTG1IPP53801 180 aa3.59□□□□□ -1.83
COPS3-208ENST00000486032 NPC2P61916 151 aa3.59□□□□□ -1.83
COPS3-208ENST00000486032 HERV-K104P63124 156 aa3.59□□□□□ -1.83
COPS3-208ENST00000486032 RNF151Q2KHN1 245 aa3.59□□□□□ -1.83
COPS3-208ENST00000486032 SPATA45Q537H7 98 aa3.59□□□□□ -1.83
COPS3-208ENST00000486032 PYY3Q5JQD4 70 aa3.59□□□□□ -1.83
COPS3-208ENST00000486032 PCP2Q8IVA1 136 aa3.59□□□□□ -1.83
COPS3-208ENST00000486032 VAMP8Q9BV40 100 aa3.59□□□□□ -1.83
COPS3-208ENST00000486032 PKIGQ9Y2B9 76 aa3.59□□□□□ -1.83
COPS3-208ENST00000486032 MYCBP2O75592 4640 aa3.58□□□□□ -1.84
COPS3-208ENST00000486032 A0A087WYN8 130 aa3.58□□□□□ -1.84
COPS3-208ENST00000486032 A0A0J9YXY3 114 aa3.58□□□□□ -1.84
COPS3-208ENST00000486032 FAM168BA1KXE4 195 aa3.58□□□□□ -1.84
COPS3-208ENST00000486032 SFTA2Q6UW10 78 aa3.58□□□□□ -1.84
COPS3-208ENST00000486032 SCGB1D4Q6XE38 83 aa3.58□□□□□ -1.84
COPS3-208ENST00000486032 FAM19A5Q7Z5A7 132 aaPredicted RBP3.58□□□□□ -1.84
COPS3-208ENST00000486032 DAND5Q8N907 189 aa3.58□□□□□ -1.84
COPS3-208ENST00000486032 SPACA4Q8TDM5 124 aa3.58□□□□□ -1.84
COPS3-208ENST00000486032 TP73-AS1Q9UF72 201 aa3.58□□□□□ -1.84
COPS3-208ENST00000486032 LOC105371267A0A1B0GV96 52 aa3.57□□□□□ -1.84
COPS3-208ENST00000486032 A0A1W2PNN7 141 aa3.57□□□□□ -1.84
COPS3-208ENST00000486032 SMR3BP02814 79 aaPredicted RBP3.57□□□□□ -1.84
COPS3-208ENST00000486032 TLX1NBP0CAT3 122 aa3.57□□□□□ -1.84
COPS3-208ENST00000486032 CIRBPQ14011 172 aaKnown RBP3.57□□□□□ -1.84
COPS3-208ENST00000486032 C9orf129Q5T035 196 aaKnown RBP3.57□□□□□ -1.84
COPS3-208ENST00000486032 SCXQ7RTU7 201 aa3.57□□□□□ -1.84
COPS3-208ENST00000486032 MIR7-3HGQ8N6C7 128 aa3.57□□□□□ -1.84
COPS3-208ENST00000486032 CIRBP-AS1Q8TBR5 109 aa3.57□□□□□ -1.84
COPS3-208ENST00000486032 C14orf144Q96I85 54 aa3.57□□□□□ -1.84
COPS3-208ENST00000486032 VPS13BQ7Z7G8 4022 aa3.57□□□□□ -1.84
COPS3-208ENST00000486032 LINC00587B1AMM8 73 aa3.56□□□□□ -1.84
COPS3-208ENST00000486032 XGP55808 180 aa3.56□□□□□ -1.84
COPS3-208ENST00000486032 S100A12P80511 92 aa3.56□□□□□ -1.84
COPS3-208ENST00000486032 COX17Q14061 63 aa3.56□□□□□ -1.84
COPS3-208ENST00000486032 SERTAD4-AS1Q5TG53 156 aa3.56□□□□□ -1.84
COPS3-208ENST00000486032 Q6ZSA8 131 aa3.56□□□□□ -1.84
COPS3-208ENST00000486032 PHF5AQ7RTV0 110 aaKnown RBP3.56□□□□□ -1.84
COPS3-208ENST00000486032 MIEN1Q9BRT3 115 aa3.56□□□□□ -1.84
COPS3-208ENST00000486032 SND1-IT1Q9HBX3 110 aa3.56□□□□□ -1.84
COPS3-208ENST00000486032 LINC00474Q9P2X8 69 aa3.56□□□□□ -1.84
COPS3-208ENST00000486032 PKHD1L1Q86WI1 4243 aa3.55□□□□□ -1.84
COPS3-208ENST00000486032 GAGE10A6NGK3 116 aa3.55□□□□□ -1.84
COPS3-208ENST00000486032 NCR3O14931 201 aa3.55□□□□□ -1.84
COPS3-208ENST00000486032 COX8AP10176 69 aa3.55□□□□□ -1.84
COPS3-208ENST00000486032 UBE2BP63146 152 aa3.55□□□□□ -1.84
COPS3-208ENST00000486032 ADAMTSL4-AS1Q5T5F5 129 aa3.55□□□□□ -1.84
COPS3-208ENST00000486032 BOD1L2Q8IYS8 172 aa3.55□□□□□ -1.84
COPS3-208ENST00000486032 NKAPP1Q8N9T2 125 aa3.55□□□□□ -1.84
COPS3-208ENST00000486032 KRTAP4-4Q9BYR3 166 aa3.55□□□□□ -1.84
COPS3-208ENST00000486032 TMEM238C9JI98 176 aa3.54□□□□□ -1.84
COPS3-208ENST00000486032 M0QXV9 152 aa3.54□□□□□ -1.84
COPS3-208ENST00000486032 PRR3P79522 188 aaKnown RBP3.54□□□□□ -1.84
COPS3-208ENST00000486032 SRSF9Q13242 221 aaKnown RBP eCLIP3.54□□□□□ -1.84
COPS3-208ENST00000486032 SLC25A34Q6PIV7 304 aa3.54□□□□□ -1.84
COPS3-208ENST00000486032 PRO1933Q9H354 126 aa3.54□□□□□ -1.84
COPS3-208ENST00000486032 C22orf24Q9Y442 160 aa3.54□□□□□ -1.84
COPS3-208ENST00000486032 FAT3Q8TDW7 4589 aa3.54□□□□□ -1.84
COPS3-208ENST00000486032 RPL37AP8A6NKH3 93 aa3.53□□□□□ -1.84
COPS3-208ENST00000486032 TIMM17BO60830 172 aa3.53□□□□□ -1.84
COPS3-208ENST00000486032 CDK2AP2O75956 126 aa3.53□□□□□ -1.84
COPS3-208ENST00000486032 RPL24P83731 157 aaKnown RBP3.53□□□□□ -1.84
COPS3-208ENST00000486032 SOSTDC1Q6X4U4 206 aa3.53□□□□□ -1.84
COPS3-208ENST00000486032 KRTAP7-1Q8IUC3 87 aa3.53□□□□□ -1.84
COPS3-208ENST00000486032 MUSTN1Q8IVN3 82 aa3.53□□□□□ -1.84
COPS3-208ENST00000486032 Q8NDZ9 215 aa3.53□□□□□ -1.84
COPS3-208ENST00000486032 LINC00308Q8TCZ7 52 aa3.53□□□□□ -1.84
COPS3-208ENST00000486032 C7orf33Q8WU49 177 aa3.53□□□□□ -1.84
COPS3-208ENST00000486032 LITAFQ99732 161 aa3.53□□□□□ -1.84
COPS3-208ENST00000486032 PLAC8Q9NZF1 115 aa3.53□□□□□ -1.84
COPS3-208ENST00000486032 LRP1Q07954 4544 aaKnown RBP3.52□□□□□ -1.85
COPS3-208ENST00000486032 IGKV2-28A0A075B6P5 120 aa3.52□□□□□ -1.85
COPS3-208ENST00000486032 IGKV2D-28P01615 120 aa3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms