RNA–Protein interactions for RNA: ENST00000485705.5

RPUSD3-217, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 3

Gene RPUSD3, Length 630 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-217ENST00000485705 S100A12P80511 92 aa9.69□□□□□ -0.86
RPUSD3-217ENST00000485705 PHF5AQ7RTV0 110 aaKnown RBP9.69□□□□□ -0.86
RPUSD3-217ENST00000485705 A0A0J9YXY3 114 aa9.67□□□□□ -0.86
RPUSD3-217ENST00000485705 FAM229AH3BQW9 127 aa9.67□□□□□ -0.86
RPUSD3-217ENST00000485705 MIR7-3HGQ8N6C7 128 aa9.67□□□□□ -0.86
RPUSD3-217ENST00000485705 ZNF815PA8K554 130 aa9.66□□□□□ -0.86
RPUSD3-217ENST00000485705 DAND5Q8N907 189 aa9.66□□□□□ -0.86
RPUSD3-217ENST00000485705 PKHD1L1Q86WI1 4243 aa9.66□□□□□ -0.86
RPUSD3-217ENST00000485705 M0QXV9 152 aa9.65□□□□□ -0.86
RPUSD3-217ENST00000485705 PCP2Q8IVA1 136 aa9.65□□□□□ -0.86
RPUSD3-217ENST00000485705 Q8NDZ9 215 aa9.65□□□□□ -0.86
RPUSD3-217ENST00000485705 LINC00587B1AMM8 73 aa9.64□□□□□ -0.87
RPUSD3-217ENST00000485705 KRTAP10-4P60372 401 aaPredicted RBP9.64□□□□□ -0.87
RPUSD3-217ENST00000485705 RPL37AP61513 92 aaKnown RBP9.64□□□□□ -0.87
RPUSD3-217ENST00000485705 KRTAP11-1Q8IUC1 163 aa9.64□□□□□ -0.87
RPUSD3-217ENST00000485705 C7orf33Q8WU49 177 aa9.64□□□□□ -0.87
RPUSD3-217ENST00000485705 PLA2G2DQ9UNK4 145 aa9.64□□□□□ -0.87
RPUSD3-217ENST00000485705 C22orf24Q9Y442 160 aa9.64□□□□□ -0.87
RPUSD3-217ENST00000485705 SRRM2Q9UQ35 2752 aaKnown RBP9.63□□□□□ -0.87
RPUSD3-217ENST00000485705 HSBP1L1C9JCN9 74 aa9.63□□□□□ -0.87
RPUSD3-217ENST00000485705 JOSD1Q15040 202 aaPredicted RBP9.63□□□□□ -0.87
RPUSD3-217ENST00000485705 ADAMTSL4-AS1Q5T5F5 129 aa9.63□□□□□ -0.87
RPUSD3-217ENST00000485705 PLA2G1BP04054 148 aaKnown RBP9.62□□□□□ -0.87
RPUSD3-217ENST00000485705 VPREB1P12018 145 aa9.62□□□□□ -0.87
RPUSD3-217ENST00000485705 LITAFQ99732 161 aa9.61□□□□□ -0.87
RPUSD3-217ENST00000485705 FLG2Q5D862 2391 aaPredicted RBP9.61□□□□□ -0.87
RPUSD3-217ENST00000485705 IGLV5-37A0A075B6J1 123 aa9.6□□□□□ -0.87
RPUSD3-217ENST00000485705 HERC1Q15751 4861 aa9.59□□□□□ -0.87
RPUSD3-217ENST00000485705 GAGE10A6NGK3 116 aa9.59□□□□□ -0.87
RPUSD3-217ENST00000485705 EIF4EBP3O60516 100 aaPredicted RBP9.59□□□□□ -0.87
RPUSD3-217ENST00000485705 NPC2P61916 151 aa9.59□□□□□ -0.87
RPUSD3-217ENST00000485705 PYY3Q5JQD4 70 aa9.59□□□□□ -0.87
RPUSD3-217ENST00000485705 SOSTDC1Q6X4U4 206 aa9.59□□□□□ -0.87
RPUSD3-217ENST00000485705 MRPL55Q7Z7F7 128 aaKnown RBP9.59□□□□□ -0.87
RPUSD3-217ENST00000485705 BOD1L2Q8IYS8 172 aa9.59□□□□□ -0.87
RPUSD3-217ENST00000485705 TP73-AS1Q9UF72 201 aa9.59□□□□□ -0.87
RPUSD3-217ENST00000485705 TIMM17BO60830 172 aa9.58□□□□□ -0.88
RPUSD3-217ENST00000485705 UBE2BP63146 152 aa9.58□□□□□ -0.88
RPUSD3-217ENST00000485705 PRR3P79522 188 aaKnown RBP9.58□□□□□ -0.88
RPUSD3-217ENST00000485705 NKAPP1Q8N9T2 125 aa9.58□□□□□ -0.88
RPUSD3-217ENST00000485705 LINC00167Q96N53 147 aa9.58□□□□□ -0.88
RPUSD3-217ENST00000485705 PSORS1C2Q9UIG4 136 aa9.58□□□□□ -0.88
RPUSD3-217ENST00000485705 LOC107984156A0A0G2JMH3 177 aa9.57□□□□□ -0.88
RPUSD3-217ENST00000485705 HNRNPA3P51991 378 aaKnown RBP9.57□□□□□ -0.88
RPUSD3-217ENST00000485705 RPL24P83731 157 aaKnown RBP9.57□□□□□ -0.88
RPUSD3-217ENST00000485705 LBHQ53QV2 105 aaPredicted RBP9.57□□□□□ -0.88
RPUSD3-217ENST00000485705 SCGB1D4Q6XE38 83 aa9.57□□□□□ -0.88
RPUSD3-217ENST00000485705 ARL17AQ8IVW1 177 aa9.57□□□□□ -0.88
RPUSD3-217ENST00000485705 PAM16Q9Y3D7 125 aa9.57□□□□□ -0.88
RPUSD3-217ENST00000485705 RPL37AP8A6NKH3 93 aa9.56□□□□□ -0.88
RPUSD3-217ENST00000485705 NCR3O14931 201 aa9.54□□□□□ -0.88
RPUSD3-217ENST00000485705 SPATA45Q537H7 98 aa9.54□□□□□ -0.88
RPUSD3-217ENST00000485705 VAMP8Q9BV40 100 aa9.54□□□□□ -0.88
RPUSD3-217ENST00000485705 PCP4L1A6NKN8 68 aa9.53□□□□□ -0.88
RPUSD3-217ENST00000485705 INAFM2P0DMQ5 153 aa9.53□□□□□ -0.88
RPUSD3-217ENST00000485705 C1orf137Q5JT78 98 aa9.53□□□□□ -0.88
RPUSD3-217ENST00000485705 LINC00308Q8TCZ7 52 aa9.53□□□□□ -0.88
RPUSD3-217ENST00000485705 MIEN1Q9BRT3 115 aa9.53□□□□□ -0.88
RPUSD3-217ENST00000485705 COX8AP10176 69 aa9.52□□□□□ -0.89
RPUSD3-217ENST00000485705 C14orf144Q96I85 54 aa9.52□□□□□ -0.89
RPUSD3-217ENST00000485705 SPANXDQ9BXN6 97 aa9.52□□□□□ -0.89
RPUSD3-217ENST00000485705 SPANXCQ9NY87 97 aa9.52□□□□□ -0.89
RPUSD3-217ENST00000485705 IGKV2-28A0A075B6P5 120 aa9.51□□□□□ -0.89
RPUSD3-217ENST00000485705 TMEM238C9JI98 176 aa9.51□□□□□ -0.89
RPUSD3-217ENST00000485705 M0R378 163 aa9.51□□□□□ -0.89
RPUSD3-217ENST00000485705 IGKV2D-28P01615 120 aa9.51□□□□□ -0.89
RPUSD3-217ENST00000485705 IGLV1-50A0A075B6I6 118 aa9.5□□□□□ -0.89
RPUSD3-217ENST00000485705 MYCBP2O75592 4640 aa9.49□□□□□ -0.89
RPUSD3-217ENST00000485705 UBR4Q5T4S7 5183 aa9.48□□□□□ -0.89
RPUSD3-217ENST00000485705 NDUFC2O95298 119 aa9.48□□□□□ -0.89
RPUSD3-217ENST00000485705 IGLV7-43P04211 117 aa9.48□□□□□ -0.89
RPUSD3-217ENST00000485705 LRP1Q07954 4544 aaKnown RBP9.48□□□□□ -0.89
RPUSD3-217ENST00000485705 FAT3Q8TDW7 4589 aa9.48□□□□□ -0.89
RPUSD3-217ENST00000485705 DLEU1O43261 78 aa9.47□□□□□ -0.89
RPUSD3-217ENST00000485705 SRSF9Q13242 221 aaKnown RBP eCLIP9.47□□□□□ -0.89
RPUSD3-217ENST00000485705 MUSTN1Q8IVN3 82 aa9.47□□□□□ -0.89
RPUSD3-217ENST00000485705 SPANXB1Q9NS25 103 aaPredicted RBP9.47□□□□□ -0.89
RPUSD3-217ENST00000485705 TRBV10-3A0A0K0K1G6 114 aa9.46□□□□□ -0.9
RPUSD3-217ENST00000485705 TRBV10-2A0A0K0K1G8 114 aa9.46□□□□□ -0.9
RPUSD3-217ENST00000485705 Q6ZVH6 145 aa9.46□□□□□ -0.9
RPUSD3-217ENST00000485705 TSTD3H0UI37 97 aa9.45□□□□□ -0.9
RPUSD3-217ENST00000485705 IFITM1P13164 125 aa9.45□□□□□ -0.9
RPUSD3-217ENST00000485705 BCE1O60756 84 aa9.44□□□□□ -0.9
RPUSD3-217ENST00000485705 SLC25A34Q6PIV7 304 aa9.44□□□□□ -0.9
RPUSD3-217ENST00000485705 REG3GQ6UW15 175 aa9.44□□□□□ -0.9
RPUSD3-217ENST00000485705 TMEM126AQ9H061 195 aa9.44□□□□□ -0.9
RPUSD3-217ENST00000485705 DDTP30046 118 aa9.43□□□□□ -0.9
RPUSD3-217ENST00000485705 IGLV6-57P01721 117 aa9.42□□□□□ -0.9
RPUSD3-217ENST00000485705 SPINK6Q6UWN8 80 aa9.42□□□□□ -0.9
RPUSD3-217ENST00000485705 C2orf91Q6ZV80 131 aa9.42□□□□□ -0.9
RPUSD3-217ENST00000485705 PPDPFQ9H3Y8 114 aa9.42□□□□□ -0.9
RPUSD3-217ENST00000485705 KCNQ1DNQ9H478 68 aa9.42□□□□□ -0.9
RPUSD3-217ENST00000485705 PRYO14603 147 aa9.41□□□□□ -0.9
RPUSD3-217ENST00000485705 S100A7L2Q5SY68 101 aa9.41□□□□□ -0.9
RPUSD3-217ENST00000485705 LINC00337Q8N6G1 96 aa9.41□□□□□ -0.9
RPUSD3-217ENST00000485705 COPS9Q8WXC6 57 aa9.41□□□□□ -0.9
RPUSD3-217ENST00000485705 ZNF861PO60384 105 aa9.4□□□□□ -0.9
RPUSD3-217ENST00000485705 CTAG1AP78358 180 aa9.4□□□□□ -0.9
RPUSD3-217ENST00000485705 HIGD1BQ9P298 99 aa9.4□□□□□ -0.9
RPUSD3-217ENST00000485705 PRLHP81277 87 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms