RNA–Protein interactions for RNA: ENST00000483851.6

SHOX2-204, Transcript of short stature homeobox 2, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SHOX2, Length 1,866 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-204ENST00000483851 H3BT86 120 aa17.39■□□□□ 0.38
SHOX2-204ENST00000483851 LINC00337Q8N6G1 96 aa17.39■□□□□ 0.37
SHOX2-204ENST00000483851 LINC00526Q96FQ7 95 aa17.38■□□□□ 0.37
SHOX2-204ENST00000483851 CAMK2N2Q96S95 79 aa17.38■□□□□ 0.37
SHOX2-204ENST00000483851 CDIP1Q9H305 208 aa17.38■□□□□ 0.37
SHOX2-204ENST00000483851 C21orf62-AS1Q17RA5 79 aa17.37■□□□□ 0.37
SHOX2-204ENST00000483851 SIGMAR1Q99720 223 aa17.37■□□□□ 0.37
SHOX2-204ENST00000483851 HIGD2BQ4VC39 106 aa17.37■□□□□ 0.37
SHOX2-204ENST00000483851 RPL28P46779 137 aaKnown RBP17.35■□□□□ 0.37
SHOX2-204ENST00000483851 C9orf116Q5BN46 136 aaPredicted RBP17.35■□□□□ 0.37
SHOX2-204ENST00000483851 C6orf48Q9UBA6 75 aa17.35■□□□□ 0.37
SHOX2-204ENST00000483851 NDUFC2O95298 119 aa17.33■□□□□ 0.37
SHOX2-204ENST00000483851 TTC32Q5I0X7 151 aa17.32■□□□□ 0.36
SHOX2-204ENST00000483851 TEX49A0A1B0GTD5 131 aa17.29■□□□□ 0.36
SHOX2-204ENST00000483851 TRACP01848 142 aa17.29■□□□□ 0.36
SHOX2-204ENST00000483851 KRTAP1-5Q9BYS1 174 aa17.29■□□□□ 0.36
SHOX2-204ENST00000483851 Q6ZRU5 148 aa17.29■□□□□ 0.36
SHOX2-204ENST00000483851 USP17L23D6RBM5 183 aa17.28■□□□□ 0.36
SHOX2-204ENST00000483851 SYCNQ0VAF6 134 aa17.28■□□□□ 0.36
SHOX2-204ENST00000483851 FAM218AQ96MZ4 157 aa17.27■□□□□ 0.35
SHOX2-204ENST00000483851 SMIM11BQ8TCY0 68 aa17.25■□□□□ 0.35
SHOX2-204ENST00000483851 SCGB1A1P11684 91 aa17.24■□□□□ 0.35
SHOX2-204ENST00000483851 NBDYA0A0U1RRE5 68 aa17.23■□□□□ 0.35
SHOX2-204ENST00000483851 NDUFC2-KCTD14E9PQ53 114 aa17.23■□□□□ 0.35
SHOX2-204ENST00000483851 CASC10Q5T4H9 136 aa17.23■□□□□ 0.35
SHOX2-204ENST00000483851 DNAH7Q8WXX0 4024 aa17.23■□□□□ 0.35
SHOX2-204ENST00000483851 CSMD3Q7Z407 3707 aa17.23■□□□□ 0.35
SHOX2-204ENST00000483851 DNAH1Q9P2D7 4330 aa17.19■□□□□ 0.34
SHOX2-204ENST00000483851 XGP55808 180 aa17.19■□□□□ 0.34
SHOX2-204ENST00000483851 FBN3Q75N90 2809 aa17.18■□□□□ 0.34
SHOX2-204ENST00000483851 TLX1NBP0CAT3 122 aa17.18■□□□□ 0.34
SHOX2-204ENST00000483851 PSCAO43653 123 aa17.17■□□□□ 0.34
SHOX2-204ENST00000483851 C22orf24Q9Y442 160 aa17.17■□□□□ 0.34
SHOX2-204ENST00000483851 H0YGX0 51 aa17.16■□□□□ 0.34
SHOX2-204ENST00000483851 MT-ATP8P03928 68 aa17.15■□□□□ 0.34
SHOX2-204ENST00000483851 TMEM126AQ9H061 195 aa17.15■□□□□ 0.34
SHOX2-204ENST00000483851 C14orf177Q52M58 125 aa17.14■□□□□ 0.33
SHOX2-204ENST00000483851 OR13C6PQ8NH95 151 aa17.14■□□□□ 0.33
SHOX2-204ENST00000483851 WWC2-AS2Q96NR7 200 aa17.14■□□□□ 0.33
SHOX2-204ENST00000483851 SLPIP03973 132 aa17.13■□□□□ 0.33
SHOX2-204ENST00000483851 BAALC-AS2P0C853 105 aa17.13■□□□□ 0.33
SHOX2-204ENST00000483851 PLECQ15149 4684 aaKnown RBP17.12■□□□□ 0.33
SHOX2-204ENST00000483851 XAGE1AQ9HD64 81 aa17.12■□□□□ 0.33
SHOX2-204ENST00000483851 A0A087WYN8 130 aa17.11■□□□□ 0.33
SHOX2-204ENST00000483851 Q6ZRP5 223 aa17.1■□□□□ 0.33
SHOX2-204ENST00000483851 Q8NDZ9 215 aa17.1■□□□□ 0.33
SHOX2-204ENST00000483851 PRR3P79522 188 aaKnown RBP17.1■□□□□ 0.33
SHOX2-204ENST00000483851 FAM240AA0A1B0GVK7 77 aa17.09■□□□□ 0.33
SHOX2-204ENST00000483851 LECT2O14960 151 aa17.09■□□□□ 0.33
SHOX2-204ENST00000483851 CNBPP62633 177 aaKnown RBP17.07■□□□□ 0.32
SHOX2-204ENST00000483851 TENM2Q9NT68 2774 aa17.07■□□□□ 0.32
SHOX2-204ENST00000483851 S100A7L2Q5SY68 101 aa17.06■□□□□ 0.32
SHOX2-204ENST00000483851 STARD9Q9P2P6 4700 aa17.06■□□□□ 0.32
SHOX2-204ENST00000483851 NCR3O14931 201 aa17.05■□□□□ 0.32
SHOX2-204ENST00000483851 GAGE2EQ4V326 116 aa17.05■□□□□ 0.32
SHOX2-204ENST00000483851 GAGE2DQ9UEU5 116 aa17.05■□□□□ 0.32
SHOX2-204ENST00000483851 Q6ZRN7 208 aaPredicted RBP17.05■□□□□ 0.32
SHOX2-204ENST00000483851 LYSTQ99698 3801 aa17.05■□□□□ 0.32
SHOX2-204ENST00000483851 VPREB1P12018 145 aa17.04■□□□□ 0.32
SHOX2-204ENST00000483851 IGLV6-57P01721 117 aa17.03■□□□□ 0.32
SHOX2-204ENST00000483851 PLA2G2DQ9UNK4 145 aa17.03■□□□□ 0.32
SHOX2-204ENST00000483851 LOC107984640A0A0U1RRK4 108 aa17.02■□□□□ 0.32
SHOX2-204ENST00000483851 RPL18AQ02543 176 aaKnown RBP17.01■□□□□ 0.31
SHOX2-204ENST00000483851 C9orf129Q5T035 196 aaKnown RBP17.01■□□□□ 0.31
SHOX2-204ENST00000483851 Q6ZR54 194 aa17.01■□□□□ 0.31
SHOX2-204ENST00000483851 LRCOL1A6NCL2 159 aa17■□□□□ 0.31
SHOX2-204ENST00000483851 M0R378 163 aa17■□□□□ 0.31
SHOX2-204ENST00000483851 DNAL4O96015 105 aa16.99■□□□□ 0.31
SHOX2-204ENST00000483851 LINC00167Q96N53 147 aa16.99■□□□□ 0.31
SHOX2-204ENST00000483851 VPS13DQ5THJ4 4388 aa16.99■□□□□ 0.31
SHOX2-204ENST00000483851 A0A1B0GX51 115 aa16.97■□□□□ 0.31
SHOX2-204ENST00000483851 C3orf84H3BNL1 204 aa16.97■□□□□ 0.31
SHOX2-204ENST00000483851 ACYP1P07311 99 aa16.95■□□□□ 0.3
SHOX2-204ENST00000483851 OBSCN-AS1Q96MR7 158 aa16.95■□□□□ 0.3
SHOX2-204ENST00000483851 M0R2N4 97 aa16.95■□□□□ 0.3
SHOX2-204ENST00000483851 PKIGQ9Y2B9 76 aa16.95■□□□□ 0.3
SHOX2-204ENST00000483851 INAFM2P0DMQ5 153 aa16.93■□□□□ 0.3
SHOX2-204ENST00000483851 IGLV5-37A0A075B6J1 123 aa16.93■□□□□ 0.3
SHOX2-204ENST00000483851 TRBV10-3A0A0K0K1G6 114 aa16.93■□□□□ 0.3
SHOX2-204ENST00000483851 SNCGO76070 127 aa16.9■□□□□ 0.3
SHOX2-204ENST00000483851 GAGE2BQ13066 116 aa16.9■□□□□ 0.3
SHOX2-204ENST00000483851 NKAPP1Q8N9T2 125 aa16.9■□□□□ 0.3
SHOX2-204ENST00000483851 C6orf99Q4VX62 202 aa16.9■□□□□ 0.3
SHOX2-204ENST00000483851 Q8N814 137 aa16.9■□□□□ 0.3
SHOX2-204ENST00000483851 LINC00476Q8WZB0 136 aa16.9■□□□□ 0.3
SHOX2-204ENST00000483851 TRAV23DV6A0A075B6W5 121 aa16.89■□□□□ 0.29
SHOX2-204ENST00000483851 C16orf90A8MZG2 172 aa16.88■□□□□ 0.29
SHOX2-204ENST00000483851 SDIM1Q6ZPB5 146 aa16.88■□□□□ 0.29
SHOX2-204ENST00000483851 LY6G6CO95867 125 aa16.88■□□□□ 0.29
SHOX2-204ENST00000483851 ORMDL1Q9P0S3 153 aa16.88■□□□□ 0.29
SHOX2-204ENST00000483851 Q6Q795 121 aa16.87■□□□□ 0.29
SHOX2-204ENST00000483851 C9orf163Q8N9P6 203 aa16.87■□□□□ 0.29
SHOX2-204ENST00000483851 SERTAD4-AS1Q5TG53 156 aa16.86■□□□□ 0.29
SHOX2-204ENST00000483851 IGLV2-33A0A075B6J2 118 aaPredicted RBP16.86■□□□□ 0.29
SHOX2-204ENST00000483851 TRBV7-6A0A0J9YX20 115 aa16.86■□□□□ 0.29
SHOX2-204ENST00000483851 TGP01266 2768 aa16.85■□□□□ 0.29
SHOX2-204ENST00000483851 DIRC1Q969H9 104 aa16.84■□□□□ 0.29
SHOX2-204ENST00000483851 ZNF73O43830 326 aaPredicted RBP16.83■□□□□ 0.28
SHOX2-204ENST00000483851 C1orf134Q5TEV5 83 aa16.83■□□□□ 0.28
SHOX2-204ENST00000483851 A0A087WTM6 91 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms