RNA–Protein interactions for RNA: ENST00000482042.1

CTNNB1-213, Transcript of catenin beta 1, humanhuman

TSL 2

Gene CTNNB1, Length 1,366 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNB1-213ENST00000482042 CDK2AP2O75956 126 aa4.3□□□□□ -1.72
CTNNB1-213ENST00000482042 SNRPEP62304 92 aaKnown RBP4.3□□□□□ -1.72
CTNNB1-213ENST00000482042 PLEKHB2Q96CS7 222 aa4.3□□□□□ -1.72
CTNNB1-213ENST00000482042 LEPROTO15243 131 aa4.29□□□□□ -1.72
CTNNB1-213ENST00000482042 NMUP48645 174 aa4.29□□□□□ -1.72
CTNNB1-213ENST00000482042 COX17Q14061 63 aa4.29□□□□□ -1.72
CTNNB1-213ENST00000482042 LINC00526Q96FQ7 95 aa4.29□□□□□ -1.72
CTNNB1-213ENST00000482042 HIST1H2BLQ99880 126 aa4.29□□□□□ -1.72
CTNNB1-213ENST00000482042 DYNC1H1Q14204 4646 aaKnown RBP4.29□□□□□ -1.72
CTNNB1-213ENST00000482042 MYMXA0A1B0GTQ4 84 aa4.28□□□□□ -1.72
CTNNB1-213ENST00000482042 NDUFC2-KCTD14E9PQ53 114 aa4.28□□□□□ -1.72
CTNNB1-213ENST00000482042 KRTAP10-1P60331 282 aa4.28□□□□□ -1.72
CTNNB1-213ENST00000482042 RPL18AQ02543 176 aaKnown RBP4.28□□□□□ -1.72
CTNNB1-213ENST00000482042 UNQ6190/PRO20217Q6UXQ8 127 aa4.28□□□□□ -1.72
CTNNB1-213ENST00000482042 SDIM1Q6ZPB5 146 aa4.28□□□□□ -1.72
CTNNB1-213ENST00000482042 Q6ZSA8 131 aa4.28□□□□□ -1.72
CTNNB1-213ENST00000482042 DPH3Q96FX2 82 aa4.28□□□□□ -1.72
CTNNB1-213ENST00000482042 C6orf48Q9UBA6 75 aa4.28□□□□□ -1.72
CTNNB1-213ENST00000482042 DNAH8Q96JB1 4490 aa4.28□□□□□ -1.72
CTNNB1-213ENST00000482042 E9PLD3 99 aa4.27□□□□□ -1.73
CTNNB1-213ENST00000482042 LGALS3P17931 250 aaKnown RBP4.27□□□□□ -1.73
CTNNB1-213ENST00000482042 GAGE2BQ13066 116 aa4.27□□□□□ -1.73
CTNNB1-213ENST00000482042 CIRBPQ14011 172 aaKnown RBP4.27□□□□□ -1.73
CTNNB1-213ENST00000482042 J3QQQ9 107 aa4.27□□□□□ -1.73
CTNNB1-213ENST00000482042 FUSP35637 526 aaKnown RBP eCLIP4.27□□□□□ -1.73
CTNNB1-213ENST00000482042 S100A12P80511 92 aa4.27□□□□□ -1.73
CTNNB1-213ENST00000482042 C2orf82Q6UX34 121 aa4.27□□□□□ -1.73
CTNNB1-213ENST00000482042 SPACA4Q8TDM5 124 aa4.27□□□□□ -1.73
CTNNB1-213ENST00000482042 PMCHL2Q9BQD1 86 aa4.27□□□□□ -1.73
CTNNB1-213ENST00000482042 PAM16Q9Y3D7 125 aa4.27□□□□□ -1.73
CTNNB1-213ENST00000482042 EPPK1P58107 5090 aaKnown RBP4.26□□□□□ -1.73
CTNNB1-213ENST00000482042 A0A096LNI7 61 aa4.26□□□□□ -1.73
CTNNB1-213ENST00000482042 IGKV2-24A0A0C4DH68 120 aa4.26□□□□□ -1.73
CTNNB1-213ENST00000482042 UBE2V1Q13404 147 aa4.26□□□□□ -1.73
CTNNB1-213ENST00000482042 LINC01620Q4KN68 170 aa4.26□□□□□ -1.73
CTNNB1-213ENST00000482042 MEIG1Q5JSS6 88 aa4.26□□□□□ -1.73
CTNNB1-213ENST00000482042 NDUFA12Q9UI09 145 aa4.26□□□□□ -1.73
CTNNB1-213ENST00000482042 ERG28Q9UKR5 140 aa4.26□□□□□ -1.73
CTNNB1-213ENST00000482042 C5orf47Q569G3 176 aa4.25□□□□□ -1.73
CTNNB1-213ENST00000482042 Q6ZRP5 223 aa4.25□□□□□ -1.73
CTNNB1-213ENST00000482042 SMIM29Q86T20 159 aa4.25□□□□□ -1.73
CTNNB1-213ENST00000482042 BOD1L2Q8IYS8 172 aa4.25□□□□□ -1.73
CTNNB1-213ENST00000482042 STPG4Q8N801 248 aa4.25□□□□□ -1.73
CTNNB1-213ENST00000482042 C7orf33Q8WU49 177 aa4.25□□□□□ -1.73
CTNNB1-213ENST00000482042 ZNF625Q96I27 306 aaPredicted RBP4.25□□□□□ -1.73
CTNNB1-213ENST00000482042 PLAC8Q9NZF1 115 aa4.25□□□□□ -1.73
CTNNB1-213ENST00000482042 PKHD1P08F94 4074 aa4.24□□□□□ -1.73
CTNNB1-213ENST00000482042 LRP1BQ9NZR2 4599 aa4.24□□□□□ -1.73
CTNNB1-213ENST00000482042 PFN2P35080 140 aa4.24□□□□□ -1.73
CTNNB1-213ENST00000482042 XGP55808 180 aa4.24□□□□□ -1.73
CTNNB1-213ENST00000482042 LINC00158P58513 81 aa4.24□□□□□ -1.73
CTNNB1-213ENST00000482042 RPL24P83731 157 aaKnown RBP4.24□□□□□ -1.73
CTNNB1-213ENST00000482042 VAMP3Q15836 100 aa4.24□□□□□ -1.73
CTNNB1-213ENST00000482042 GAGE2EQ4V326 116 aa4.24□□□□□ -1.73
CTNNB1-213ENST00000482042 C9orf116Q5BN46 136 aaPredicted RBP4.24□□□□□ -1.73
CTNNB1-213ENST00000482042 SCXQ7RTU7 201 aa4.24□□□□□ -1.73
CTNNB1-213ENST00000482042 CIRBP-AS1Q8TBR5 109 aa4.24□□□□□ -1.73
CTNNB1-213ENST00000482042 GAGE2DQ9UEU5 116 aa4.24□□□□□ -1.73
CTNNB1-213ENST00000482042 COPS9Q8WXC6 57 aa4.23□□□□□ -1.73
CTNNB1-213ENST00000482042 ZNF815PA8K554 130 aa4.22□□□□□ -1.73
CTNNB1-213ENST00000482042 EPM2AB3EWF7 344 aa4.22□□□□□ -1.73
CTNNB1-213ENST00000482042 TIMM17BO60830 172 aa4.22□□□□□ -1.73
CTNNB1-213ENST00000482042 CHTF8P0CG12 524 aa4.22□□□□□ -1.73
CTNNB1-213ENST00000482042 JOSD1Q15040 202 aaPredicted RBP4.22□□□□□ -1.73
CTNNB1-213ENST00000482042 MIEN1Q9BRT3 115 aa4.22□□□□□ -1.73
CTNNB1-213ENST00000482042 TP73-AS1Q9UF72 201 aa4.22□□□□□ -1.73
CTNNB1-213ENST00000482042 APOBP04114 4563 aaKnown RBP4.21□□□□□ -1.73
CTNNB1-213ENST00000482042 A0A0J9YXY3 114 aa4.21□□□□□ -1.74
CTNNB1-213ENST00000482042 TMEM238C9JI98 176 aa4.21□□□□□ -1.74
CTNNB1-213ENST00000482042 SMIM13P0DJ93 91 aa4.21□□□□□ -1.74
CTNNB1-213ENST00000482042 TSPEAR-AS2P59090 65 aa4.21□□□□□ -1.74
CTNNB1-213ENST00000482042 SCGB1D4Q6XE38 83 aa4.21□□□□□ -1.74
CTNNB1-213ENST00000482042 Q6ZVH6 145 aa4.21□□□□□ -1.74
CTNNB1-213ENST00000482042 ATOH7Q8N100 152 aa4.21□□□□□ -1.74
CTNNB1-213ENST00000482042 NKAPP1Q8N9T2 125 aa4.21□□□□□ -1.74
CTNNB1-213ENST00000482042 BIRC6Q9NR09 4857 aa4.21□□□□□ -1.74
CTNNB1-213ENST00000482042 PANO1I0J062 215 aa4.2□□□□□ -1.74
CTNNB1-213ENST00000482042 M0QXV9 152 aa4.2□□□□□ -1.74
CTNNB1-213ENST00000482042 C9orf129Q5T035 196 aaKnown RBP4.2□□□□□ -1.74
CTNNB1-213ENST00000482042 VAMP8Q9BV40 100 aa4.2□□□□□ -1.74
CTNNB1-213ENST00000482042 SND1-IT1Q9HBX3 110 aa4.2□□□□□ -1.74
CTNNB1-213ENST00000482042 XAGE1AQ9HD64 81 aa4.2□□□□□ -1.74
CTNNB1-213ENST00000482042 IGKV2D-26A0A0A0MRZ7 120 aa4.19□□□□□ -1.74
CTNNB1-213ENST00000482042 LOC107984156A0A0G2JMH3 177 aa4.19□□□□□ -1.74
CTNNB1-213ENST00000482042 A0A1W2PNN7 141 aa4.19□□□□□ -1.74
CTNNB1-213ENST00000482042 RPL37AP61513 92 aaKnown RBP4.19□□□□□ -1.74
CTNNB1-213ENST00000482042 UBE2BP63146 152 aa4.19□□□□□ -1.74
CTNNB1-213ENST00000482042 FAM19A5Q7Z5A7 132 aaPredicted RBP4.19□□□□□ -1.74
CTNNB1-213ENST00000482042 ARL17AQ8IVW1 177 aa4.19□□□□□ -1.74
CTNNB1-213ENST00000482042 MIR7-3HGQ8N6C7 128 aa4.19□□□□□ -1.74
CTNNB1-213ENST00000482042 PPDPFQ9H3Y8 114 aa4.19□□□□□ -1.74
CTNNB1-213ENST00000482042 DLEU1O43261 78 aa4.18□□□□□ -1.74
CTNNB1-213ENST00000482042 NDUFC2O95298 119 aa4.18□□□□□ -1.74
CTNNB1-213ENST00000482042 SMR3BP02814 79 aaPredicted RBP4.18□□□□□ -1.74
CTNNB1-213ENST00000482042 IFITM1P13164 125 aa4.18□□□□□ -1.74
CTNNB1-213ENST00000482042 MRPL55Q7Z7F7 128 aaKnown RBP4.18□□□□□ -1.74
CTNNB1-213ENST00000482042 SPANXDQ9BXN6 97 aa4.18□□□□□ -1.74
CTNNB1-213ENST00000482042 SPANXCQ9NY87 97 aa4.18□□□□□ -1.74
CTNNB1-213ENST00000482042 C22orf24Q9Y442 160 aa4.18□□□□□ -1.74
CTNNB1-213ENST00000482042 TRBV10-2A0A0K0K1G8 114 aa4.17□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms