RNA–Protein interactions for RNA: ENST00000481980.1

NUP58-212, Transcript of nucleoporin 58, humanhuman

TSL 3

Gene NUP58, Length 605 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP58-212ENST00000481980 KIAA0087Q14695 138 aa10.56□□□□□ -0.72
NUP58-212ENST00000481980 C2orf82Q6UX34 121 aa10.56□□□□□ -0.72
NUP58-212ENST00000481980 C12orf57Q99622 126 aa10.56□□□□□ -0.72
NUP58-212ENST00000481980 TSPEAR-AS2P59090 65 aa10.55□□□□□ -0.72
NUP58-212ENST00000481980 C7orf33Q8WU49 177 aa10.55□□□□□ -0.72
NUP58-212ENST00000481980 COX8AP10176 69 aa10.54□□□□□ -0.72
NUP58-212ENST00000481980 SLC25A34Q6PIV7 304 aa10.54□□□□□ -0.72
NUP58-212ENST00000481980 UNQ6190/PRO20217Q6UXQ8 127 aa10.54□□□□□ -0.72
NUP58-212ENST00000481980 ZNF625Q96I27 306 aaPredicted RBP10.54□□□□□ -0.72
NUP58-212ENST00000481980 RNF151Q2KHN1 245 aa10.53□□□□□ -0.72
NUP58-212ENST00000481980 TMEM238C9JI98 176 aa10.52□□□□□ -0.73
NUP58-212ENST00000481980 TSTD3H0UI37 97 aa10.52□□□□□ -0.73
NUP58-212ENST00000481980 PCP2Q8IVA1 136 aa10.52□□□□□ -0.73
NUP58-212ENST00000481980 C14orf144Q96I85 54 aa10.52□□□□□ -0.73
NUP58-212ENST00000481980 ERG28Q9UKR5 140 aa10.52□□□□□ -0.73
NUP58-212ENST00000481980 LINC00158P58513 81 aa10.51□□□□□ -0.73
NUP58-212ENST00000481980 COX17Q14061 63 aa10.51□□□□□ -0.73
NUP58-212ENST00000481980 IGKV2-24A0A0C4DH68 120 aa10.5□□□□□ -0.73
NUP58-212ENST00000481980 DLEU1O43261 78 aa10.5□□□□□ -0.73
NUP58-212ENST00000481980 PFN2P35080 140 aa10.5□□□□□ -0.73
NUP58-212ENST00000481980 RPL18AQ02543 176 aaKnown RBP10.5□□□□□ -0.73
NUP58-212ENST00000481980 COPS9Q8WXC6 57 aa10.5□□□□□ -0.73
NUP58-212ENST00000481980 LINC01600Q96MT4 127 aa10.5□□□□□ -0.73
NUP58-212ENST00000481980 MIEN1Q9BRT3 115 aa10.5□□□□□ -0.73
NUP58-212ENST00000481980 C6orf48Q9UBA6 75 aa10.5□□□□□ -0.73
NUP58-212ENST00000481980 UQCR10Q9UDW1 63 aa10.5□□□□□ -0.73
NUP58-212ENST00000481980 LOC107984640A0A0U1RRK4 108 aa10.49□□□□□ -0.73
NUP58-212ENST00000481980 PRR3P79522 188 aaKnown RBP10.49□□□□□ -0.73
NUP58-212ENST00000481980 BOD1L2Q8IYS8 172 aa10.49□□□□□ -0.73
NUP58-212ENST00000481980 TTTY13Q9BZ97 58 aa10.49□□□□□ -0.73
NUP58-212ENST00000481980 A0A0J9YXY3 114 aa10.48□□□□□ -0.73
NUP58-212ENST00000481980 NDUFC2-KCTD14E9PQ53 114 aa10.48□□□□□ -0.73
NUP58-212ENST00000481980 TIMM17BO60830 172 aa10.48□□□□□ -0.73
NUP58-212ENST00000481980 C10orf25Q5T742 122 aa10.48□□□□□ -0.73
NUP58-212ENST00000481980 LINC00518Q8N0U6 118 aa10.48□□□□□ -0.73
NUP58-212ENST00000481980 A0A0U1RRA0 63 aa10.47□□□□□ -0.73
NUP58-212ENST00000481980 SMIM13P0DJ93 91 aa10.46□□□□□ -0.73
NUP58-212ENST00000481980 A0A096LNI7 61 aa10.45□□□□□ -0.74
NUP58-212ENST00000481980 SRSF9Q13242 221 aaKnown RBP eCLIP10.45□□□□□ -0.74
NUP58-212ENST00000481980 C9orf116Q5BN46 136 aaPredicted RBP10.45□□□□□ -0.74
NUP58-212ENST00000481980 GAGE2BQ13066 116 aa10.44□□□□□ -0.74
NUP58-212ENST00000481980 GAGE2EQ4V326 116 aa10.44□□□□□ -0.74
NUP58-212ENST00000481980 Q6ZVH6 145 aa10.44□□□□□ -0.74
NUP58-212ENST00000481980 PRO1933Q9H354 126 aa10.44□□□□□ -0.74
NUP58-212ENST00000481980 LINC00474Q9P2X8 69 aa10.44□□□□□ -0.74
NUP58-212ENST00000481980 GAGE2DQ9UEU5 116 aa10.44□□□□□ -0.74
NUP58-212ENST00000481980 TLX1NBP0CAT3 122 aa10.43□□□□□ -0.74
NUP58-212ENST00000481980 MIR7-3HGQ8N6C7 128 aa10.43□□□□□ -0.74
NUP58-212ENST00000481980 KRTAP10-8P60410 259 aa10.42□□□□□ -0.74
NUP58-212ENST00000481980 SPINK6Q6UWN8 80 aa10.42□□□□□ -0.74
NUP58-212ENST00000481980 HIST1H4GQ99525 98 aa10.42□□□□□ -0.74
NUP58-212ENST00000481980 HIGD1BQ9P298 99 aa10.41□□□□□ -0.74
NUP58-212ENST00000481980 IFITM1P13164 125 aa10.4□□□□□ -0.74
NUP58-212ENST00000481980 REG3GQ6UW15 175 aa10.4□□□□□ -0.74
NUP58-212ENST00000481980 SPANXDQ9BXN6 97 aa10.4□□□□□ -0.74
NUP58-212ENST00000481980 SPANXB1Q9NS25 103 aaPredicted RBP10.4□□□□□ -0.74
NUP58-212ENST00000481980 SPANXCQ9NY87 97 aa10.4□□□□□ -0.74
NUP58-212ENST00000481980 Q6ZRP5 223 aa10.39□□□□□ -0.75
NUP58-212ENST00000481980 DAND5Q8N907 189 aa10.39□□□□□ -0.75
NUP58-212ENST00000481980 PTTG1IPP53801 180 aa10.38□□□□□ -0.75
NUP58-212ENST00000481980 SND1-IT1Q9HBX3 110 aa10.38□□□□□ -0.75
NUP58-212ENST00000481980 TP73-AS1Q9UF72 201 aa10.38□□□□□ -0.75
NUP58-212ENST00000481980 NPC2P61916 151 aa10.37□□□□□ -0.75
NUP58-212ENST00000481980 RPL24P83731 157 aaKnown RBP10.37□□□□□ -0.75
NUP58-212ENST00000481980 XAGE1AQ9HD64 81 aa10.37□□□□□ -0.75
NUP58-212ENST00000481980 HSD52Q0P140 79 aa10.36□□□□□ -0.75
NUP58-212ENST00000481980 TAL2Q16559 108 aa10.36□□□□□ -0.75
NUP58-212ENST00000481980 TMEM238LA0A1B0GVL6 79 aa10.35□□□□□ -0.75
NUP58-212ENST00000481980 A6NJY4 79 aa10.35□□□□□ -0.75
NUP58-212ENST00000481980 LINC00308Q8TCZ7 52 aa10.35□□□□□ -0.75
NUP58-212ENST00000481980 LITAFQ99732 161 aa10.35□□□□□ -0.75
NUP58-212ENST00000481980 ADAMTSL4-AS1Q5T5F5 129 aa10.34□□□□□ -0.75
NUP58-212ENST00000481980 C2orf91Q6ZV80 131 aa10.34□□□□□ -0.75
NUP58-212ENST00000481980 NKAPP1Q8N9T2 125 aa10.34□□□□□ -0.75
NUP58-212ENST00000481980 M0R143 59 aa10.32□□□□□ -0.76
NUP58-212ENST00000481980 PPDPFQ9H3Y8 114 aa10.32□□□□□ -0.76
NUP58-212ENST00000481980 DDTP30046 118 aa10.31□□□□□ -0.76
NUP58-212ENST00000481980 FAM19A5Q7Z5A7 132 aaPredicted RBP10.31□□□□□ -0.76
NUP58-212ENST00000481980 MUSTN1Q8IVN3 82 aa10.31□□□□□ -0.76
NUP58-212ENST00000481980 A0A1W2PNN7 141 aa10.29□□□□□ -0.76
NUP58-212ENST00000481980 NDUFC2O95298 119 aa10.29□□□□□ -0.76
NUP58-212ENST00000481980 C9orf129Q5T035 196 aaKnown RBP10.29□□□□□ -0.76
NUP58-212ENST00000481980 CEND1Q8N111 149 aa10.29□□□□□ -0.76
NUP58-212ENST00000481980 LOC107984156A0A0G2JMH3 177 aa10.28□□□□□ -0.76
NUP58-212ENST00000481980 CTAG1AP78358 180 aa10.28□□□□□ -0.76
NUP58-212ENST00000481980 ARL17AQ8IVW1 177 aa10.28□□□□□ -0.76
NUP58-212ENST00000481980 LBHQ53QV2 105 aaPredicted RBP10.27□□□□□ -0.77
NUP58-212ENST00000481980 CBY1Q9Y3M2 126 aa10.27□□□□□ -0.77
NUP58-212ENST00000481980 PCP4L1A6NKN8 68 aa10.26□□□□□ -0.77
NUP58-212ENST00000481980 M0QXV9 152 aa10.26□□□□□ -0.77
NUP58-212ENST00000481980 S100A7L2Q5SY68 101 aa10.26□□□□□ -0.77
NUP58-212ENST00000481980 SOSTDC1Q6X4U4 206 aa10.26□□□□□ -0.77
NUP58-212ENST00000481980 RAB37Q96AX2 223 aa10.26□□□□□ -0.77
NUP58-212ENST00000481980 PSORS1C2Q9UIG4 136 aa10.26□□□□□ -0.77
NUP58-212ENST00000481980 LPAP08519 4548 aa10.26□□□□□ -0.77
NUP58-212ENST00000481980 A4D1N5 150 aa10.25□□□□□ -0.77
NUP58-212ENST00000481980 NCR3O14931 201 aa10.25□□□□□ -0.77
NUP58-212ENST00000481980 TRAV13-2A0A0B4J235 113 aa10.24□□□□□ -0.77
NUP58-212ENST00000481980 TRBV10-2A0A0K0K1G8 114 aa10.24□□□□□ -0.77
NUP58-212ENST00000481980 M0R378 163 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms