RNA–Protein interactions for RNA: ENST00000481502.5

SYNE1-225, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 3

Gene SYNE1, Length 585 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-225ENST00000481502 HYDINQ4G0P3 5121 aa5.29□□□□□ -1.56
SYNE1-225ENST00000481502 IGLV5-37A0A075B6J1 123 aa5.29□□□□□ -1.56
SYNE1-225ENST00000481502 HNRNPA3P51991 378 aaKnown RBP5.29□□□□□ -1.56
SYNE1-225ENST00000481502 KRTAP10-2P60368 255 aa5.29□□□□□ -1.56
SYNE1-225ENST00000481502 HSD52Q0P140 79 aa5.29□□□□□ -1.56
SYNE1-225ENST00000481502 HIST1H4GQ99525 98 aa5.29□□□□□ -1.56
SYNE1-225ENST00000481502 CBY1Q9Y3M2 126 aa5.29□□□□□ -1.56
SYNE1-225ENST00000481502 DNAH17Q9UFH2 4485 aa5.29□□□□□ -1.56
SYNE1-225ENST00000481502 TRBV10-2A0A0K0K1G8 114 aa5.28□□□□□ -1.56
SYNE1-225ENST00000481502 TMEM238LA0A1B0GVL6 79 aa5.28□□□□□ -1.56
SYNE1-225ENST00000481502 RPL18AQ02543 176 aaKnown RBP5.28□□□□□ -1.56
SYNE1-225ENST00000481502 LCE3BQ5TA77 95 aa5.28□□□□□ -1.56
SYNE1-225ENST00000481502 Q6ZSA8 131 aa5.28□□□□□ -1.56
SYNE1-225ENST00000481502 FRAS1Q86XX4 4008 aa5.27□□□□□ -1.57
SYNE1-225ENST00000481502 DDTP30046 118 aa5.27□□□□□ -1.57
SYNE1-225ENST00000481502 GAGE2BQ13066 116 aa5.27□□□□□ -1.57
SYNE1-225ENST00000481502 GAGE2EQ4V326 116 aa5.27□□□□□ -1.57
SYNE1-225ENST00000481502 MUSTN1Q8IVN3 82 aa5.27□□□□□ -1.57
SYNE1-225ENST00000481502 SPACA4Q8TDM5 124 aa5.27□□□□□ -1.57
SYNE1-225ENST00000481502 PRO1933Q9H354 126 aa5.27□□□□□ -1.57
SYNE1-225ENST00000481502 GAGE2DQ9UEU5 116 aa5.27□□□□□ -1.57
SYNE1-225ENST00000481502 DNAH10Q8IVF4 4471 aa5.27□□□□□ -1.57
SYNE1-225ENST00000481502 A0A096LNI7 61 aa5.26□□□□□ -1.57
SYNE1-225ENST00000481502 A0A0U1RRA0 63 aa5.26□□□□□ -1.57
SYNE1-225ENST00000481502 M0R143 59 aa5.26□□□□□ -1.57
SYNE1-225ENST00000481502 GHRHP01286 108 aa5.26□□□□□ -1.57
SYNE1-225ENST00000481502 LBHQ53QV2 105 aaPredicted RBP5.26□□□□□ -1.57
SYNE1-225ENST00000481502 C9orf129Q5T035 196 aaKnown RBP5.26□□□□□ -1.57
SYNE1-225ENST00000481502 CEND1Q8N111 149 aa5.26□□□□□ -1.57
SYNE1-225ENST00000481502 PLAC8Q9NZF1 115 aa5.26□□□□□ -1.57
SYNE1-225ENST00000481502 DAND5Q8N907 189 aa5.25□□□□□ -1.57
SYNE1-225ENST00000481502 XAGE1AQ9HD64 81 aa5.25□□□□□ -1.57
SYNE1-225ENST00000481502 FAT2Q9NYQ8 4349 aa5.24□□□□□ -1.57
SYNE1-225ENST00000481502 TRAV13-2A0A0B4J235 113 aa5.24□□□□□ -1.57
SYNE1-225ENST00000481502 M0R378 163 aa5.24□□□□□ -1.57
SYNE1-225ENST00000481502 VPREB1P12018 145 aa5.24□□□□□ -1.57
SYNE1-225ENST00000481502 SOSTDC1Q6X4U4 206 aa5.24□□□□□ -1.57
SYNE1-225ENST00000481502 TMEM126AQ9H061 195 aa5.24□□□□□ -1.57
SYNE1-225ENST00000481502 HECTD4Q9Y4D8 3996 aa5.23□□□□□ -1.57
SYNE1-225ENST00000481502 A0A087WYN8 130 aa5.23□□□□□ -1.57
SYNE1-225ENST00000481502 A0A0B4J2C4 111 aa5.23□□□□□ -1.57
SYNE1-225ENST00000481502 IGKV2-24A0A0C4DH68 120 aa5.23□□□□□ -1.57
SYNE1-225ENST00000481502 A0A1B0GWB2 263 aa5.23□□□□□ -1.57
SYNE1-225ENST00000481502 A4D1N5 150 aa5.23□□□□□ -1.57
SYNE1-225ENST00000481502 KRTAP10-1P60331 282 aa5.23□□□□□ -1.57
SYNE1-225ENST00000481502 CTAG1AP78358 180 aa5.23□□□□□ -1.57
SYNE1-225ENST00000481502 NKAPP1Q8N9T2 125 aa5.23□□□□□ -1.57
SYNE1-225ENST00000481502 DPH3Q96FX2 82 aa5.23□□□□□ -1.57
SYNE1-225ENST00000481502 A6NDN8 102 aa5.22□□□□□ -1.57
SYNE1-225ENST00000481502 C22orf24Q9Y442 160 aa5.22□□□□□ -1.57
SYNE1-225ENST00000481502 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.22□□□□□ -1.57
SYNE1-225ENST00000481502 A0A1W2PNN7 141 aa5.21□□□□□ -1.58
SYNE1-225ENST00000481502 EIF4EBP3O60516 100 aaPredicted RBP5.21□□□□□ -1.58
SYNE1-225ENST00000481502 IGLV6-57P01721 117 aa5.21□□□□□ -1.58
SYNE1-225ENST00000481502 LINC01620Q4KN68 170 aa5.21□□□□□ -1.58
SYNE1-225ENST00000481502 BVES-AS1Q5T3Y7 98 aa5.21□□□□□ -1.58
SYNE1-225ENST00000481502 MRPL55Q7Z7F7 128 aaKnown RBP5.21□□□□□ -1.58
SYNE1-225ENST00000481502 RYR3Q15413 4870 aa5.21□□□□□ -1.58
SYNE1-225ENST00000481502 IGKV2-28A0A075B6P5 120 aa5.2□□□□□ -1.58
SYNE1-225ENST00000481502 M0QXV9 152 aa5.2□□□□□ -1.58
SYNE1-225ENST00000481502 CDK2AP2O75956 126 aa5.2□□□□□ -1.58
SYNE1-225ENST00000481502 IGKV2D-28P01615 120 aa5.2□□□□□ -1.58
SYNE1-225ENST00000481502 CHTF8P0CG12 524 aa5.2□□□□□ -1.58
SYNE1-225ENST00000481502 CFC1BP0CG36 223 aa5.2□□□□□ -1.58
SYNE1-225ENST00000481502 CFC1P0CG37 223 aa5.2□□□□□ -1.58
SYNE1-225ENST00000481502 FXYD2P54710 66 aa5.2□□□□□ -1.58
SYNE1-225ENST00000481502 NPC2P61916 151 aa5.2□□□□□ -1.58
SYNE1-225ENST00000481502 SERTAD4-AS1Q5TG53 156 aa5.2□□□□□ -1.58
SYNE1-225ENST00000481502 KRTAP7-1Q8IUC3 87 aa5.2□□□□□ -1.58
SYNE1-225ENST00000481502 CIRBP-AS1Q8TBR5 109 aa5.2□□□□□ -1.58
SYNE1-225ENST00000481502 RAB37Q96AX2 223 aa5.2□□□□□ -1.58
SYNE1-225ENST00000481502 KCNQ1DNQ9H478 68 aa5.2□□□□□ -1.58
SYNE1-225ENST00000481502 PRO1854Q9UHT4 67 aa5.2□□□□□ -1.58
SYNE1-225ENST00000481502 IGLV1-50A0A075B6I6 118 aa5.19□□□□□ -1.58
SYNE1-225ENST00000481502 PANO1I0J062 215 aa5.19□□□□□ -1.58
SYNE1-225ENST00000481502 S100A7L2Q5SY68 101 aa5.19□□□□□ -1.58
SYNE1-225ENST00000481502 C7orf33Q8WU49 177 aa5.19□□□□□ -1.58
SYNE1-225ENST00000481502 LINC00167Q96N53 147 aa5.19□□□□□ -1.58
SYNE1-225ENST00000481502 FAM30AQ9NZY2 134 aa5.19□□□□□ -1.58
SYNE1-225ENST00000481502 PKD1P98161 4303 aa5.19□□□□□ -1.58
SYNE1-225ENST00000481502 DNAH11Q96DT5 4516 aa5.18□□□□□ -1.58
SYNE1-225ENST00000481502 TRBV7-6A0A0J9YX20 115 aa5.18□□□□□ -1.58
SYNE1-225ENST00000481502 FAM168BA1KXE4 195 aa5.18□□□□□ -1.58
SYNE1-225ENST00000481502 PRYO14603 147 aa5.18□□□□□ -1.58
SYNE1-225ENST00000481502 FUSP35637 526 aaKnown RBP eCLIP5.18□□□□□ -1.58
SYNE1-225ENST00000481502 HINT1P49773 126 aaPredicted RBP5.18□□□□□ -1.58
SYNE1-225ENST00000481502 SCXQ7RTU7 201 aa5.18□□□□□ -1.58
SYNE1-225ENST00000481502 FAM19A5Q7Z5A7 132 aaPredicted RBP5.18□□□□□ -1.58
SYNE1-225ENST00000481502 LINC00337Q8N6G1 96 aa5.18□□□□□ -1.58
SYNE1-225ENST00000481502 Q8NDZ9 215 aa5.18□□□□□ -1.58
SYNE1-225ENST00000481502 SPRR1AP35321 89 aa5.17□□□□□ -1.58
SYNE1-225ENST00000481502 RPL28P46779 137 aaKnown RBP5.17□□□□□ -1.58
SYNE1-225ENST00000481502 KRTAP4-12Q9BQ66 201 aa5.17□□□□□ -1.58
SYNE1-225ENST00000481502 NHP2Q9NX24 153 aaKnown RBP5.17□□□□□ -1.58
SYNE1-225ENST00000481502 DNAH5Q8TE73 4624 aa5.17□□□□□ -1.58
SYNE1-225ENST00000481502 TRAV23DV6A0A075B6W5 121 aa5.16□□□□□ -1.58
SYNE1-225ENST00000481502 TRBV10-3A0A0K0K1G6 114 aa5.16□□□□□ -1.58
SYNE1-225ENST00000481502 H0Y9J4 135 aa5.16□□□□□ -1.58
SYNE1-225ENST00000481502 XGP55808 180 aa5.16□□□□□ -1.58
SYNE1-225ENST00000481502 UBE2BP63146 152 aa5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms