RNA–Protein interactions for RNA: ENST00000480750.3

SRGAP3-206, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 4

Gene SRGAP3, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-206ENST00000480750 LRP1Q07954 4544 aaKnown RBP5.81□□□□□ -1.48
SRGAP3-206ENST00000480750 LOC100996750A0A140TA64 210 aa5.81□□□□□ -1.48
SRGAP3-206ENST00000480750 COX7A2LO14548 114 aa5.81□□□□□ -1.48
SRGAP3-206ENST00000480750 UBE2D1P51668 147 aa5.81□□□□□ -1.48
SRGAP3-206ENST00000480750 C2orf66Q6UXQ4 117 aa5.81□□□□□ -1.48
SRGAP3-206ENST00000480750 Q6ZUT4 128 aa5.81□□□□□ -1.48
SRGAP3-206ENST00000480750 SPACA4Q8TDM5 124 aa5.81□□□□□ -1.48
SRGAP3-206ENST00000480750 C7orf33Q8WU49 177 aa5.81□□□□□ -1.48
SRGAP3-206ENST00000480750 CARD19Q96LW7 228 aa5.81□□□□□ -1.48
SRGAP3-206ENST00000480750 KRTAP4-6Q9BYQ5 205 aa5.81□□□□□ -1.48
SRGAP3-206ENST00000480750 SPANXA1Q9NS26 97 aa5.81□□□□□ -1.48
SRGAP3-206ENST00000480750 CSDC2Q9Y534 153 aaKnown RBP5.81□□□□□ -1.48
SRGAP3-206ENST00000480750 C11orf86A6NJI1 115 aa5.8□□□□□ -1.48
SRGAP3-206ENST00000480750 KRTAP29-1A8MX34 341 aaPredicted RBP5.8□□□□□ -1.48
SRGAP3-206ENST00000480750 APOMO95445 188 aa5.8□□□□□ -1.48
SRGAP3-206ENST00000480750 SYCNQ0VAF6 134 aa5.8□□□□□ -1.48
SRGAP3-206ENST00000480750 CIRBPQ14011 172 aaKnown RBP5.8□□□□□ -1.48
SRGAP3-206ENST00000480750 TIMM21Q9BVV7 248 aa5.8□□□□□ -1.48
SRGAP3-206ENST00000480750 PRO0461Q9UI25 63 aa5.8□□□□□ -1.48
SRGAP3-206ENST00000480750 KRTAP10-4P60372 401 aaPredicted RBP5.79□□□□□ -1.48
SRGAP3-206ENST00000480750 RPL39P62891 51 aaKnown RBP5.79□□□□□ -1.48
SRGAP3-206ENST00000480750 PMVKQ15126 192 aa5.79□□□□□ -1.48
SRGAP3-206ENST00000480750 SCGB1D4Q6XE38 83 aa5.79□□□□□ -1.48
SRGAP3-206ENST00000480750 LINC01600Q96MT4 127 aa5.79□□□□□ -1.48
SRGAP3-206ENST00000480750 OPRPNQ99935 248 aaPredicted RBP5.79□□□□□ -1.48
SRGAP3-206ENST00000480750 LINC00474Q9P2X8 69 aa5.79□□□□□ -1.48
SRGAP3-206ENST00000480750 IGLV4-69A0A075B6H9 119 aa5.78□□□□□ -1.48
SRGAP3-206ENST00000480750 A0A096LNI7 61 aa5.78□□□□□ -1.48
SRGAP3-206ENST00000480750 ZNF815PA8K554 130 aa5.78□□□□□ -1.48
SRGAP3-206ENST00000480750 OXTP01178 125 aa5.78□□□□□ -1.48
SRGAP3-206ENST00000480750 C5orf38Q86SI9 138 aa5.78□□□□□ -1.48
SRGAP3-206ENST00000480750 PPDPFLQ8WWR9 84 aa5.78□□□□□ -1.48
SRGAP3-206ENST00000480750 CAMK2N2Q96S95 79 aa5.78□□□□□ -1.48
SRGAP3-206ENST00000480750 PLAC8Q9NZF1 115 aa5.78□□□□□ -1.48
SRGAP3-206ENST00000480750 K7ERJ3 54 aa5.77□□□□□ -1.49
SRGAP3-206ENST00000480750 SRSF9Q13242 221 aaKnown RBP eCLIP5.77□□□□□ -1.49
SRGAP3-206ENST00000480750 TEN1Q86WV5 123 aa5.77□□□□□ -1.49
SRGAP3-206ENST00000480750 NAA38Q9BRA0 125 aaKnown RBP5.77□□□□□ -1.49
SRGAP3-206ENST00000480750 SPANXDQ9BXN6 97 aa5.77□□□□□ -1.49
SRGAP3-206ENST00000480750 A0A0B4J2C4 111 aa5.76□□□□□ -1.49
SRGAP3-206ENST00000480750 LOC107984640A0A0U1RRK4 108 aa5.76□□□□□ -1.49
SRGAP3-206ENST00000480750 IGIPA6NJ69 53 aa5.76□□□□□ -1.49
SRGAP3-206ENST00000480750 MRPS36P82909 103 aaKnown RBP5.76□□□□□ -1.49
SRGAP3-206ENST00000480750 SPAG11BQ08648 103 aa5.76□□□□□ -1.49
SRGAP3-206ENST00000480750 GAGE2BQ13066 116 aa5.76□□□□□ -1.49
SRGAP3-206ENST00000480750 ETDBQ3ZM63 59 aa5.76□□□□□ -1.49
SRGAP3-206ENST00000480750 PLEKHB2Q96CS7 222 aa5.76□□□□□ -1.49
SRGAP3-206ENST00000480750 RPL18AQ02543 176 aaKnown RBP5.75□□□□□ -1.49
SRGAP3-206ENST00000480750 Q6ZRU5 148 aa5.75□□□□□ -1.49
SRGAP3-206ENST00000480750 FAM104AQ969W3 186 aa5.75□□□□□ -1.49
SRGAP3-206ENST00000480750 C2orf48Q96LS8 159 aa5.75□□□□□ -1.49
SRGAP3-206ENST00000480750 TTTY13Q9BZ97 58 aa5.75□□□□□ -1.49
SRGAP3-206ENST00000480750 LEPROTO15243 131 aa5.74□□□□□ -1.49
SRGAP3-206ENST00000480750 TSPAN13O95857 204 aa5.74□□□□□ -1.49
SRGAP3-206ENST00000480750 LGALS3P17931 250 aaKnown RBP5.74□□□□□ -1.49
SRGAP3-206ENST00000480750 PRO1854Q9UHT4 67 aa5.74□□□□□ -1.49
SRGAP3-206ENST00000480750 PYGO1Q9Y3Y4 419 aa5.74□□□□□ -1.49
SRGAP3-206ENST00000480750 NDUFA1O15239 70 aa5.73□□□□□ -1.49
SRGAP3-206ENST00000480750 SERTAD4-AS1Q5TG53 156 aa5.73□□□□□ -1.49
SRGAP3-206ENST00000480750 IGLV4-3A0A075B6K6 122 aa5.72□□□□□ -1.49
SRGAP3-206ENST00000480750 IGHV3OR16-9A0A0B4J2B5 98 aa5.72□□□□□ -1.49
SRGAP3-206ENST00000480750 A0A0J9YXV3 536 aa5.72□□□□□ -1.49
SRGAP3-206ENST00000480750 J3QQQ9 107 aa5.72□□□□□ -1.49
SRGAP3-206ENST00000480750 PRR3P79522 188 aaKnown RBP5.72□□□□□ -1.49
SRGAP3-206ENST00000480750 COPS9Q8WXC6 57 aa5.72□□□□□ -1.49
SRGAP3-206ENST00000480750 LOC107984156A0A0G2JMH3 177 aa5.71□□□□□ -1.5
SRGAP3-206ENST00000480750 F8WDY8 70 aa5.71□□□□□ -1.5
SRGAP3-206ENST00000480750 SCGB1C2P0DMR2 95 aa5.71□□□□□ -1.5
SRGAP3-206ENST00000480750 CKS1BP61024 79 aa5.71□□□□□ -1.5
SRGAP3-206ENST00000480750 ATXN8Q156A1 80 aa5.71□□□□□ -1.5
SRGAP3-206ENST00000480750 Q6Q795 121 aa5.71□□□□□ -1.5
SRGAP3-206ENST00000480750 ARL17AQ8IVW1 177 aa5.71□□□□□ -1.5
SRGAP3-206ENST00000480750 PPDPFQ9H3Y8 114 aa5.71□□□□□ -1.5
SRGAP3-206ENST00000480750 A0A087WZ39 114 aa5.7□□□□□ -1.5
SRGAP3-206ENST00000480750 A0A0J9YXY3 114 aa5.7□□□□□ -1.5
SRGAP3-206ENST00000480750 TRBV30A0A0K0K1B3 111 aa5.7□□□□□ -1.5
SRGAP3-206ENST00000480750 TMEM223A0PJW6 202 aa5.7□□□□□ -1.5
SRGAP3-206ENST00000480750 TIMM17BO60830 172 aa5.7□□□□□ -1.5
SRGAP3-206ENST00000480750 PRSS2P07478 247 aa5.7□□□□□ -1.5
SRGAP3-206ENST00000480750 CFC1BP0CG36 223 aa5.7□□□□□ -1.5
SRGAP3-206ENST00000480750 CFC1P0CG37 223 aa5.7□□□□□ -1.5
SRGAP3-206ENST00000480750 RPL13AP40429 203 aaKnown RBP5.7□□□□□ -1.5
SRGAP3-206ENST00000480750 PSMB2P49721 201 aa5.7□□□□□ -1.5
SRGAP3-206ENST00000480750 TMEM170BQ5T4T1 132 aa5.7□□□□□ -1.5
SRGAP3-206ENST00000480750 LINC00242Q5T6M2 205 aa5.7□□□□□ -1.5
SRGAP3-206ENST00000480750 Q6ZRP5 223 aa5.7□□□□□ -1.5
SRGAP3-206ENST00000480750 ERG28Q9UKR5 140 aa5.7□□□□□ -1.5
SRGAP3-206ENST00000480750 H3BT86 120 aa5.69□□□□□ -1.5
SRGAP3-206ENST00000480750 COX6CP09669 75 aa5.69□□□□□ -1.5
SRGAP3-206ENST00000480750 SPINK8P0C7L1 97 aa5.69□□□□□ -1.5
SRGAP3-206ENST00000480750 IFITM1P13164 125 aa5.69□□□□□ -1.5
SRGAP3-206ENST00000480750 C9orf116Q5BN46 136 aaPredicted RBP5.69□□□□□ -1.5
SRGAP3-206ENST00000480750 AMELXQ99217 191 aa5.69□□□□□ -1.5
SRGAP3-206ENST00000480750 CDIP1Q9H305 208 aa5.69□□□□□ -1.5
SRGAP3-206ENST00000480750 SPANXCQ9NY87 97 aa5.69□□□□□ -1.5
SRGAP3-206ENST00000480750 TOMM7Q9P0U1 55 aa5.69□□□□□ -1.5
SRGAP3-206ENST00000480750 FAM240AA0A1B0GVK7 77 aa5.68□□□□□ -1.5
SRGAP3-206ENST00000480750 A0A1W2PNN7 141 aa5.68□□□□□ -1.5
SRGAP3-206ENST00000480750 TCL1BO95988 128 aa5.68□□□□□ -1.5
SRGAP3-206ENST00000480750 GAGE2EQ4V326 116 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms