RNA–Protein interactions for RNA: ENST00000480461.1

TRA2B-212, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 538 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-212ENST00000480461 SCGB1D1O95968 90 aa7.65□□□□□ -1.18
TRA2B-212ENST00000480461 LGALS3P17931 250 aaKnown RBP7.65□□□□□ -1.18
TRA2B-212ENST00000480461 COX17Q14061 63 aa7.65□□□□□ -1.18
TRA2B-212ENST00000480461 Q8NDZ9 215 aa7.65□□□□□ -1.18
TRA2B-212ENST00000480461 SND1-IT1Q9HBX3 110 aa7.65□□□□□ -1.18
TRA2B-212ENST00000480461 PKIGQ9Y2B9 76 aa7.65□□□□□ -1.18
TRA2B-212ENST00000480461 LINC00158P58513 81 aa7.64□□□□□ -1.19
TRA2B-212ENST00000480461 KRTAP10-4P60372 401 aaPredicted RBP7.64□□□□□ -1.19
TRA2B-212ENST00000480461 HERV-K104P63124 156 aa7.64□□□□□ -1.19
TRA2B-212ENST00000480461 ADAMTSL4-AS1Q5T5F5 129 aa7.64□□□□□ -1.19
TRA2B-212ENST00000480461 SFTA2Q6UW10 78 aa7.64□□□□□ -1.19
TRA2B-212ENST00000480461 KRTAP11-1Q8IUC1 163 aa7.64□□□□□ -1.19
TRA2B-212ENST00000480461 PLA2G2DQ9UNK4 145 aa7.64□□□□□ -1.19
TRA2B-212ENST00000480461 A0A0J9YXY3 114 aa7.63□□□□□ -1.19
TRA2B-212ENST00000480461 NMUP48645 174 aa7.63□□□□□ -1.19
TRA2B-212ENST00000480461 JOSD1Q15040 202 aaPredicted RBP7.63□□□□□ -1.19
TRA2B-212ENST00000480461 PHF5AQ7RTV0 110 aaKnown RBP7.63□□□□□ -1.19
TRA2B-212ENST00000480461 PCP2Q8IVA1 136 aa7.63□□□□□ -1.19
TRA2B-212ENST00000480461 EIF4EBP3O60516 100 aaPredicted RBP7.62□□□□□ -1.19
TRA2B-212ENST00000480461 FAM19A5Q7Z5A7 132 aaPredicted RBP7.62□□□□□ -1.19
TRA2B-212ENST00000480461 LINC00528Q8N1L1 170 aa7.62□□□□□ -1.19
TRA2B-212ENST00000480461 DAND5Q8N907 189 aa7.62□□□□□ -1.19
TRA2B-212ENST00000480461 LITAFQ99732 161 aa7.62□□□□□ -1.19
TRA2B-212ENST00000480461 FAT3Q8TDW7 4589 aa7.61□□□□□ -1.19
TRA2B-212ENST00000480461 SMCPP49901 116 aaPredicted RBP7.61□□□□□ -1.19
TRA2B-212ENST00000480461 AKR1D1P51857 326 aa7.61□□□□□ -1.19
TRA2B-212ENST00000480461 MEIG1Q5JSS6 88 aa7.61□□□□□ -1.19
TRA2B-212ENST00000480461 MIR7-3HGQ8N6C7 128 aa7.61□□□□□ -1.19
TRA2B-212ENST00000480461 ZNF815PA8K554 130 aa7.6□□□□□ -1.19
TRA2B-212ENST00000480461 PYY3Q5JQD4 70 aa7.6□□□□□ -1.19
TRA2B-212ENST00000480461 C22orf24Q9Y442 160 aa7.6□□□□□ -1.19
TRA2B-212ENST00000480461 PLA2G1BP04054 148 aaKnown RBP7.59□□□□□ -1.19
TRA2B-212ENST00000480461 PRR3P79522 188 aaKnown RBP7.59□□□□□ -1.19
TRA2B-212ENST00000480461 RNF213Q63HN8 5207 aa7.59□□□□□ -1.19
TRA2B-212ENST00000480461 VPREB1P12018 145 aa7.58□□□□□ -1.2
TRA2B-212ENST00000480461 SOSTDC1Q6X4U4 206 aa7.58□□□□□ -1.2
TRA2B-212ENST00000480461 TP73-AS1Q9UF72 201 aa7.58□□□□□ -1.2
TRA2B-212ENST00000480461 IGLV5-37A0A075B6J1 123 aa7.57□□□□□ -1.2
TRA2B-212ENST00000480461 LOC107984156A0A0G2JMH3 177 aa7.57□□□□□ -1.2
TRA2B-212ENST00000480461 LINC00587B1AMM8 73 aa7.57□□□□□ -1.2
TRA2B-212ENST00000480461 M0QXV9 152 aa7.57□□□□□ -1.2
TRA2B-212ENST00000480461 ARL17AQ8IVW1 177 aa7.57□□□□□ -1.2
TRA2B-212ENST00000480461 HSBP1L1C9JCN9 74 aa7.55□□□□□ -1.2
TRA2B-212ENST00000480461 TIMM17BO60830 172 aa7.55□□□□□ -1.2
TRA2B-212ENST00000480461 HNRNPA3P51991 378 aaKnown RBP7.55□□□□□ -1.2
TRA2B-212ENST00000480461 LINC00167Q96N53 147 aa7.55□□□□□ -1.2
TRA2B-212ENST00000480461 GAGE10A6NGK3 116 aa7.54□□□□□ -1.2
TRA2B-212ENST00000480461 RPL37AP61513 92 aaKnown RBP7.54□□□□□ -1.2
TRA2B-212ENST00000480461 NPC2P61916 151 aa7.54□□□□□ -1.2
TRA2B-212ENST00000480461 MRPL55Q7Z7F7 128 aaKnown RBP7.54□□□□□ -1.2
TRA2B-212ENST00000480461 BOD1L2Q8IYS8 172 aa7.54□□□□□ -1.2
TRA2B-212ENST00000480461 C7orf33Q8WU49 177 aa7.54□□□□□ -1.2
TRA2B-212ENST00000480461 PSORS1C2Q9UIG4 136 aa7.54□□□□□ -1.2
TRA2B-212ENST00000480461 PAM16Q9Y3D7 125 aa7.54□□□□□ -1.2
TRA2B-212ENST00000480461 RPL37AP8A6NKH3 93 aa7.53□□□□□ -1.2
TRA2B-212ENST00000480461 OXTP01178 125 aa7.53□□□□□ -1.2
TRA2B-212ENST00000480461 C14orf144Q96I85 54 aa7.53□□□□□ -1.2
TRA2B-212ENST00000480461 PKHD1L1Q86WI1 4243 aa7.52□□□□□ -1.21
TRA2B-212ENST00000480461 LOC105371267A0A1B0GV96 52 aa7.52□□□□□ -1.21
TRA2B-212ENST00000480461 COX8AP10176 69 aa7.52□□□□□ -1.21
TRA2B-212ENST00000480461 SPATA45Q537H7 98 aa7.52□□□□□ -1.21
TRA2B-212ENST00000480461 SCGB1D4Q6XE38 83 aa7.52□□□□□ -1.21
TRA2B-212ENST00000480461 LINC00308Q8TCZ7 52 aa7.52□□□□□ -1.21
TRA2B-212ENST00000480461 RPL24P83731 157 aaKnown RBP7.51□□□□□ -1.21
TRA2B-212ENST00000480461 LBHQ53QV2 105 aaPredicted RBP7.51□□□□□ -1.21
TRA2B-212ENST00000480461 VAMP8Q9BV40 100 aa7.51□□□□□ -1.21
TRA2B-212ENST00000480461 IGLV1-50A0A075B6I6 118 aa7.5□□□□□ -1.21
TRA2B-212ENST00000480461 SRSF9Q13242 221 aaKnown RBP eCLIP7.5□□□□□ -1.21
TRA2B-212ENST00000480461 NKAPP1Q8N9T2 125 aa7.5□□□□□ -1.21
TRA2B-212ENST00000480461 SPANXDQ9BXN6 97 aa7.5□□□□□ -1.21
TRA2B-212ENST00000480461 SPANXCQ9NY87 97 aa7.5□□□□□ -1.21
TRA2B-212ENST00000480461 M0R378 163 aa7.49□□□□□ -1.21
TRA2B-212ENST00000480461 NCR3O14931 201 aa7.49□□□□□ -1.21
TRA2B-212ENST00000480461 DLEU1O43261 78 aa7.49□□□□□ -1.21
TRA2B-212ENST00000480461 UBE2BP63146 152 aa7.49□□□□□ -1.21
TRA2B-212ENST00000480461 MUSTN1Q8IVN3 82 aa7.49□□□□□ -1.21
TRA2B-212ENST00000480461 IGKV2-28A0A075B6P5 120 aa7.48□□□□□ -1.21
TRA2B-212ENST00000480461 IGKV2D-28P01615 120 aa7.48□□□□□ -1.21
TRA2B-212ENST00000480461 C1orf137Q5JT78 98 aa7.48□□□□□ -1.21
TRA2B-212ENST00000480461 TMEM238C9JI98 176 aa7.47□□□□□ -1.21
TRA2B-212ENST00000480461 NDUFC2O95298 119 aa7.47□□□□□ -1.21
TRA2B-212ENST00000480461 C2orf91Q6ZV80 131 aa7.47□□□□□ -1.21
TRA2B-212ENST00000480461 LRP2P98164 4655 aa7.46□□□□□ -1.21
TRA2B-212ENST00000480461 SPANXB1Q9NS25 103 aaPredicted RBP7.46□□□□□ -1.22
TRA2B-212ENST00000480461 TRBV10-3A0A0K0K1G6 114 aa7.45□□□□□ -1.22
TRA2B-212ENST00000480461 TRBV10-2A0A0K0K1G8 114 aa7.45□□□□□ -1.22
TRA2B-212ENST00000480461 LOC100996750A0A140TA64 210 aa7.45□□□□□ -1.22
TRA2B-212ENST00000480461 IGLV7-43P04211 117 aa7.45□□□□□ -1.22
TRA2B-212ENST00000480461 LCE2CQ5TA81 110 aa7.45□□□□□ -1.22
TRA2B-212ENST00000480461 Q6ZVH6 145 aa7.45□□□□□ -1.22
TRA2B-212ENST00000480461 MIEN1Q9BRT3 115 aa7.45□□□□□ -1.22
TRA2B-212ENST00000480461 KRTAP4-6Q9BYQ5 205 aa7.45□□□□□ -1.22
TRA2B-212ENST00000480461 IGLV6-57P01721 117 aa7.44□□□□□ -1.22
TRA2B-212ENST00000480461 IFITM1P13164 125 aa7.44□□□□□ -1.22
TRA2B-212ENST00000480461 SLC25A34Q6PIV7 304 aa7.44□□□□□ -1.22
TRA2B-212ENST00000480461 PPDPFQ9H3Y8 114 aa7.44□□□□□ -1.22
TRA2B-212ENST00000480461 TNXBP22105 4242 aa7.44□□□□□ -1.22
TRA2B-212ENST00000480461 LINC00337Q8N6G1 96 aa7.43□□□□□ -1.22
TRA2B-212ENST00000480461 TMEM126AQ9H061 195 aa7.43□□□□□ -1.22
TRA2B-212ENST00000480461 KCNQ1DNQ9H478 68 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms