RNA–Protein interactions for RNA: ENST00000480327.1

VCP-206, Transcript of valosin containing protein, humanhuman

TSL 5

Gene VCP, Length 884 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-206ENST00000480327 SPACA4Q8TDM5 124 aa5.74□□□□□ -1.49
VCP-206ENST00000480327 LRP2P98164 4655 aa5.74□□□□□ -1.49
VCP-206ENST00000480327 A0A087WYN8 130 aa5.73□□□□□ -1.49
VCP-206ENST00000480327 LEPROTO15243 131 aa5.73□□□□□ -1.49
VCP-206ENST00000480327 PFN2P35080 140 aa5.73□□□□□ -1.49
VCP-206ENST00000480327 TSPEAR-AS2P59090 65 aa5.73□□□□□ -1.49
VCP-206ENST00000480327 SERTAD4-AS1Q5TG53 156 aa5.73□□□□□ -1.49
VCP-206ENST00000480327 PKIGQ9Y2B9 76 aa5.73□□□□□ -1.49
VCP-206ENST00000480327 A0A0U1RRA0 63 aa5.72□□□□□ -1.49
VCP-206ENST00000480327 NDUFC2-KCTD14E9PQ53 114 aa5.72□□□□□ -1.49
VCP-206ENST00000480327 TLX1NBP0CAT3 122 aa5.72□□□□□ -1.49
VCP-206ENST00000480327 CIRBPQ14011 172 aaKnown RBP5.72□□□□□ -1.49
VCP-206ENST00000480327 PLEKHB2Q96CS7 222 aa5.72□□□□□ -1.49
VCP-206ENST00000480327 A0A1W2PNN7 141 aa5.71□□□□□ -1.5
VCP-206ENST00000480327 FAM168BA1KXE4 195 aa5.71□□□□□ -1.5
VCP-206ENST00000480327 HSBP1L1C9JCN9 74 aa5.71□□□□□ -1.5
VCP-206ENST00000480327 J3QQQ9 107 aa5.71□□□□□ -1.5
VCP-206ENST00000480327 OXTP01178 125 aa5.71□□□□□ -1.5
VCP-206ENST00000480327 LGALS3P17931 250 aaKnown RBP5.71□□□□□ -1.5
VCP-206ENST00000480327 PRO1933Q9H354 126 aa5.71□□□□□ -1.5
VCP-206ENST00000480327 XAGE1AQ9HD64 81 aa5.71□□□□□ -1.5
VCP-206ENST00000480327 LINC00474Q9P2X8 69 aa5.71□□□□□ -1.5
VCP-206ENST00000480327 NDUFA12Q9UI09 145 aa5.71□□□□□ -1.5
VCP-206ENST00000480327 ERG28Q9UKR5 140 aa5.71□□□□□ -1.5
VCP-206ENST00000480327 MYMXA0A1B0GTQ4 84 aa5.7□□□□□ -1.5
VCP-206ENST00000480327 E9PLD3 99 aa5.7□□□□□ -1.5
VCP-206ENST00000480327 SCGB1D1O95968 90 aa5.7□□□□□ -1.5
VCP-206ENST00000480327 LINC00158P58513 81 aa5.7□□□□□ -1.5
VCP-206ENST00000480327 MEIG1Q5JSS6 88 aa5.7□□□□□ -1.5
VCP-206ENST00000480327 C9orf129Q5T035 196 aaKnown RBP5.7□□□□□ -1.5
VCP-206ENST00000480327 FAM19A5Q7Z5A7 132 aaPredicted RBP5.7□□□□□ -1.5
VCP-206ENST00000480327 SNHG12Q9BXW3 62 aa5.7□□□□□ -1.5
VCP-206ENST00000480327 IGKV2D-26A0A0A0MRZ7 120 aa5.69□□□□□ -1.5
VCP-206ENST00000480327 SMIM13P0DJ93 91 aa5.69□□□□□ -1.5
VCP-206ENST00000480327 MT1HL1P0DM35 61 aa5.69□□□□□ -1.5
VCP-206ENST00000480327 TTTY13Q9BZ97 58 aa5.69□□□□□ -1.5
VCP-206ENST00000480327 PLAC8Q9NZF1 115 aa5.69□□□□□ -1.5
VCP-206ENST00000480327 PLA2G2DQ9UNK4 145 aa5.69□□□□□ -1.5
VCP-206ENST00000480327 NMUP48645 174 aa5.68□□□□□ -1.5
VCP-206ENST00000480327 HERV-K104P63124 156 aa5.68□□□□□ -1.5
VCP-206ENST00000480327 SFTA2Q6UW10 78 aa5.68□□□□□ -1.5
VCP-206ENST00000480327 COX17Q14061 63 aa5.67□□□□□ -1.5
VCP-206ENST00000480327 PHF5AQ7RTV0 110 aaKnown RBP5.67□□□□□ -1.5
VCP-206ENST00000480327 SND1-IT1Q9HBX3 110 aa5.67□□□□□ -1.5
VCP-206ENST00000480327 ZNF815PA8K554 130 aa5.66□□□□□ -1.5
VCP-206ENST00000480327 KRTAP7-1Q8IUC3 87 aa5.66□□□□□ -1.5
VCP-206ENST00000480327 DAND5Q8N907 189 aa5.66□□□□□ -1.5
VCP-206ENST00000480327 A0A0J9YXY3 114 aa5.65□□□□□ -1.5
VCP-206ENST00000480327 M0QXV9 152 aa5.65□□□□□ -1.5
VCP-206ENST00000480327 RPL37AP61513 92 aaKnown RBP5.65□□□□□ -1.5
VCP-206ENST00000480327 COL5A1-AS1Q5SY13 56 aa5.65□□□□□ -1.5
VCP-206ENST00000480327 MIR7-3HGQ8N6C7 128 aa5.65□□□□□ -1.5
VCP-206ENST00000480327 NPC2P61916 151 aa5.64□□□□□ -1.51
VCP-206ENST00000480327 PCP2Q8IVA1 136 aa5.64□□□□□ -1.51
VCP-206ENST00000480327 C7orf33Q8WU49 177 aa5.64□□□□□ -1.51
VCP-206ENST00000480327 GAGE10A6NGK3 116 aa5.63□□□□□ -1.51
VCP-206ENST00000480327 ADAMTSL4-AS1Q5T5F5 129 aa5.63□□□□□ -1.51
VCP-206ENST00000480327 Q8NDZ9 215 aa5.63□□□□□ -1.51
VCP-206ENST00000480327 MIEN1Q9BRT3 115 aa5.63□□□□□ -1.51
VCP-206ENST00000480327 C22orf24Q9Y442 160 aa5.63□□□□□ -1.51
VCP-206ENST00000480327 UBE2BP63146 152 aa5.62□□□□□ -1.51
VCP-206ENST00000480327 PRR3P79522 188 aaKnown RBP5.62□□□□□ -1.51
VCP-206ENST00000480327 SCGB1D4Q6XE38 83 aa5.62□□□□□ -1.51
VCP-206ENST00000480327 KRTAP11-1Q8IUC1 163 aa5.62□□□□□ -1.51
VCP-206ENST00000480327 BOD1L2Q8IYS8 172 aa5.62□□□□□ -1.51
VCP-206ENST00000480327 NKAPP1Q8N9T2 125 aa5.62□□□□□ -1.51
VCP-206ENST00000480327 A6NJY4 79 aa5.61□□□□□ -1.51
VCP-206ENST00000480327 VPREB1P12018 145 aa5.61□□□□□ -1.51
VCP-206ENST00000480327 MRPL55Q7Z7F7 128 aaKnown RBP5.61□□□□□ -1.51
VCP-206ENST00000480327 TP73-AS1Q9UF72 201 aa5.61□□□□□ -1.51
VCP-206ENST00000480327 PAM16Q9Y3D7 125 aa5.61□□□□□ -1.51
VCP-206ENST00000480327 RPL37AP8A6NKH3 93 aa5.6□□□□□ -1.51
VCP-206ENST00000480327 EIF4EBP3O60516 100 aaPredicted RBP5.6□□□□□ -1.51
VCP-206ENST00000480327 RPL24P83731 157 aaKnown RBP5.6□□□□□ -1.51
VCP-206ENST00000480327 SPATA45Q537H7 98 aa5.6□□□□□ -1.51
VCP-206ENST00000480327 LINC00167Q96N53 147 aa5.6□□□□□ -1.51
VCP-206ENST00000480327 LITAFQ99732 161 aa5.6□□□□□ -1.51
VCP-206ENST00000480327 VAMP8Q9BV40 100 aa5.6□□□□□ -1.51
VCP-206ENST00000480327 IGLV5-37A0A075B6J1 123 aa5.59□□□□□ -1.51
VCP-206ENST00000480327 NCR3O14931 201 aa5.59□□□□□ -1.51
VCP-206ENST00000480327 TIMM17BO60830 172 aa5.59□□□□□ -1.51
VCP-206ENST00000480327 UBE2V1Q13404 147 aa5.59□□□□□ -1.51
VCP-206ENST00000480327 SOSTDC1Q6X4U4 206 aa5.59□□□□□ -1.51
VCP-206ENST00000480327 PSORS1C2Q9UIG4 136 aa5.59□□□□□ -1.51
VCP-206ENST00000480327 IGKV2-28A0A075B6P5 120 aa5.58□□□□□ -1.52
VCP-206ENST00000480327 IGKV2D-28P01615 120 aa5.58□□□□□ -1.52
VCP-206ENST00000480327 C1orf137Q5JT78 98 aa5.58□□□□□ -1.52
VCP-206ENST00000480327 LINC00308Q8TCZ7 52 aa5.58□□□□□ -1.52
VCP-206ENST00000480327 TMEM238C9JI98 176 aa5.57□□□□□ -1.52
VCP-206ENST00000480327 COX8AP10176 69 aa5.57□□□□□ -1.52
VCP-206ENST00000480327 LPAP08519 4548 aa5.57□□□□□ -1.52
VCP-206ENST00000480327 LOC107984156A0A0G2JMH3 177 aa5.56□□□□□ -1.52
VCP-206ENST00000480327 M0R378 163 aa5.56□□□□□ -1.52
VCP-206ENST00000480327 ARL17AQ8IVW1 177 aa5.56□□□□□ -1.52
VCP-206ENST00000480327 SPANXDQ9BXN6 97 aa5.56□□□□□ -1.52
VCP-206ENST00000480327 SPANXCQ9NY87 97 aa5.56□□□□□ -1.52
VCP-206ENST00000480327 IGLV1-50A0A075B6I6 118 aa5.55□□□□□ -1.52
VCP-206ENST00000480327 K7ERU9 68 aa5.55□□□□□ -1.52
VCP-206ENST00000480327 SRSF9Q13242 221 aaKnown RBP eCLIP5.55□□□□□ -1.52
VCP-206ENST00000480327 MUSTN1Q8IVN3 82 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms