RNA–Protein interactions for RNA: ENST00000480321.1

MCF2L-225, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best)

Gene MCF2L, Length 5,727 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-225ENST00000480321 IGKV2-30P06310 120 aa9.47□□□□□ -0.89
MCF2L-225ENST00000480321 C22orf24Q9Y442 160 aa9.47□□□□□ -0.89
MCF2L-225ENST00000480321 H3BNG1 76 aa9.46□□□□□ -0.89
MCF2L-225ENST00000480321 CHD8Q9HCK8 2581 aa9.46□□□□□ -0.9
MCF2L-225ENST00000480321 C1orf64Q8NEQ6 169 aa9.46□□□□□ -0.9
MCF2L-225ENST00000480321 SMIM29Q86T20 159 aa9.45□□□□□ -0.9
MCF2L-225ENST00000480321 PRLHP81277 87 aa9.45□□□□□ -0.9
MCF2L-225ENST00000480321 SMCR5Q8TEV8 140 aa9.45□□□□□ -0.9
MCF2L-225ENST00000480321 ELOF1P60002 83 aaKnown RBP9.45□□□□□ -0.9
MCF2L-225ENST00000480321 KIAA0087Q14695 138 aa9.45□□□□□ -0.9
MCF2L-225ENST00000480321 C4orf26Q17RF5 130 aa9.44□□□□□ -0.9
MCF2L-225ENST00000480321 SPACA4Q8TDM5 124 aa9.43□□□□□ -0.9
MCF2L-225ENST00000480321 ABCA12Q86UK0 2595 aa9.43□□□□□ -0.9
MCF2L-225ENST00000480321 Q6ZQT0 140 aa9.43□□□□□ -0.9
MCF2L-225ENST00000480321 FAM218AQ96MZ4 157 aa9.42□□□□□ -0.9
MCF2L-225ENST00000480321 TET2Q6N021 2002 aaPredicted RBP9.42□□□□□ -0.9
MCF2L-225ENST00000480321 AGRNO00468 2067 aa9.41□□□□□ -0.9
MCF2L-225ENST00000480321 MDFIQ99750 246 aa9.41□□□□□ -0.9
MCF2L-225ENST00000480321 C6orf48Q9UBA6 75 aa9.4□□□□□ -0.9
MCF2L-225ENST00000480321 SERTAD4-AS1Q5TG53 156 aa9.4□□□□□ -0.9
MCF2L-225ENST00000480321 A0A1B0GU69 56 aa9.38□□□□□ -0.91
MCF2L-225ENST00000480321 SPAG11AQ6PDA7 123 aa9.37□□□□□ -0.91
MCF2L-225ENST00000480321 Q8NBF4 154 aa9.37□□□□□ -0.91
MCF2L-225ENST00000480321 LINC00167Q96N53 147 aa9.37□□□□□ -0.91
MCF2L-225ENST00000480321 FAM229AH3BQW9 127 aa9.37□□□□□ -0.91
MCF2L-225ENST00000480321 C7orf65Q6ZTY9 151 aa9.36□□□□□ -0.91
MCF2L-225ENST00000480321 GVQW2A0A096LPI5 108 aaPredicted RBP9.36□□□□□ -0.91
MCF2L-225ENST00000480321 LITAFQ99732 161 aa9.36□□□□□ -0.91
MCF2L-225ENST00000480321 ACYP2P14621 99 aa9.35□□□□□ -0.91
MCF2L-225ENST00000480321 ERC2-IT1O76042 136 aa9.34□□□□□ -0.91
MCF2L-225ENST00000480321 Q6ZRX8 168 aa9.34□□□□□ -0.91
MCF2L-225ENST00000480321 SETD2Q9BYW2 2564 aaPredicted RBP9.33□□□□□ -0.92
MCF2L-225ENST00000480321 J3QL48 77 aa9.32□□□□□ -0.92
MCF2L-225ENST00000480321 COL4A2P08572 1712 aa9.31□□□□□ -0.92
MCF2L-225ENST00000480321 PTPRBP23467 1997 aa9.31□□□□□ -0.92
MCF2L-225ENST00000480321 MOBPQ13875 183 aa9.3□□□□□ -0.92
MCF2L-225ENST00000480321 USP9XQ93008 2570 aaPredicted RBP9.29□□□□□ -0.92
MCF2L-225ENST00000480321 LINC00476Q8WZB0 136 aa9.28□□□□□ -0.92
MCF2L-225ENST00000480321 TRBV7-4A0A0J9YYF1 115 aa9.28□□□□□ -0.92
MCF2L-225ENST00000480321 C16orf90A8MZG2 172 aa9.28□□□□□ -0.92
MCF2L-225ENST00000480321 IGLV6-57P01721 117 aa9.28□□□□□ -0.92
MCF2L-225ENST00000480321 KRTAP24-1Q3LI83 254 aa9.27□□□□□ -0.92
MCF2L-225ENST00000480321 TRAV22A0A0B4J277 110 aa9.27□□□□□ -0.93
MCF2L-225ENST00000480321 PKD1L2Q7Z442 2459 aa9.26□□□□□ -0.93
MCF2L-225ENST00000480321 SRCAPQ6ZRS2 3230 aa9.26□□□□□ -0.93
MCF2L-225ENST00000480321 COL27A1Q8IZC6 1860 aaPredicted RBP9.26□□□□□ -0.93
MCF2L-225ENST00000480321 COX6B2Q6YFQ2 88 aa9.24□□□□□ -0.93
MCF2L-225ENST00000480321 TM2D3Q9BRN9 247 aa9.24□□□□□ -0.93
MCF2L-225ENST00000480321 C8orf87E5RJ46 101 aa9.24□□□□□ -0.93
MCF2L-225ENST00000480321 ATP11AUNQ6ZP68 121 aa9.24□□□□□ -0.93
MCF2L-225ENST00000480321 RTL8CO15255 209 aa9.23□□□□□ -0.93
MCF2L-225ENST00000480321 PHF5AQ7RTV0 110 aaKnown RBP9.23□□□□□ -0.93
MCF2L-225ENST00000480321 TYMSOSQ8TAI1 123 aa9.23□□□□□ -0.93
MCF2L-225ENST00000480321 Q8NAQ8 132 aa9.22□□□□□ -0.93
MCF2L-225ENST00000480321 VPREB1P12018 145 aa9.21□□□□□ -0.93
MCF2L-225ENST00000480321 NBDYA0A0U1RRE5 68 aa9.21□□□□□ -0.94
MCF2L-225ENST00000480321 LOC101927531A0A1B0GV80 90 aa9.2□□□□□ -0.94
MCF2L-225ENST00000480321 ACANP16112 2415 aa9.2□□□□□ -0.94
MCF2L-225ENST00000480321 WDR87Q6ZQQ6 2873 aa9.2□□□□□ -0.94
MCF2L-225ENST00000480321 IGLV8-61A0A075B6I0 122 aa9.2□□□□□ -0.94
MCF2L-225ENST00000480321 EPM2AB3EWF7 344 aa9.19□□□□□ -0.94
MCF2L-225ENST00000480321 SPINT4Q6UDR6 99 aa9.19□□□□□ -0.94
MCF2L-225ENST00000480321 CHTF8P0CG12 524 aa9.19□□□□□ -0.94
MCF2L-225ENST00000480321 CYP4F30PQ9H0H9 118 aa9.19□□□□□ -0.94
MCF2L-225ENST00000480321 A8MWP4 228 aa9.18□□□□□ -0.94
MCF2L-225ENST00000480321 Q6ZRP5 223 aa9.18□□□□□ -0.94
MCF2L-225ENST00000480321 LINC00588Q9Y4M8 146 aa9.17□□□□□ -0.94
MCF2L-225ENST00000480321 ANKRD11Q6UB99 2663 aaPredicted RBP9.17□□□□□ -0.94
MCF2L-225ENST00000480321 DNAH10OSP0CZ25 163 aa9.17□□□□□ -0.94
MCF2L-225ENST00000480321 LINC00313P59037 77 aa9.16□□□□□ -0.94
MCF2L-225ENST00000480321 KCNQ1DNQ9H478 68 aa9.16□□□□□ -0.94
MCF2L-225ENST00000480321 RPL37AP61513 92 aaKnown RBP9.16□□□□□ -0.94
MCF2L-225ENST00000480321 ST20-AS1Q8NBB2 130 aa9.16□□□□□ -0.94
MCF2L-225ENST00000480321 KLKP1Q107X0 134 aa9.16□□□□□ -0.94
MCF2L-225ENST00000480321 FASNP49327 2511 aaKnown RBP9.14□□□□□ -0.95
MCF2L-225ENST00000480321 Q96NJ1 140 aa9.14□□□□□ -0.95
MCF2L-225ENST00000480321 LINC00528Q8N1L1 170 aa9.14□□□□□ -0.95
MCF2L-225ENST00000480321 CEP295Q9C0D2 2601 aa9.13□□□□□ -0.95
MCF2L-225ENST00000480321 PCSK5Q92824 1860 aa9.13□□□□□ -0.95
MCF2L-225ENST00000480321 IGLV1-50A0A075B6I6 118 aa9.12□□□□□ -0.95
MCF2L-225ENST00000480321 POLQO75417 2590 aa9.12□□□□□ -0.95
MCF2L-225ENST00000480321 USP9YO00507 2555 aaPredicted RBP9.12□□□□□ -0.95
MCF2L-225ENST00000480321 WWC2-AS2Q96NR7 200 aa9.12□□□□□ -0.95
MCF2L-225ENST00000480321 MTORP42345 2549 aa9.12□□□□□ -0.95
MCF2L-225ENST00000480321 CSNK1G2-AS1Q8NCQ2 148 aa9.11□□□□□ -0.95
MCF2L-225ENST00000480321 A8MUN3 132 aa9.11□□□□□ -0.95
MCF2L-225ENST00000480321 MRPL34Q9BQ48 92 aaKnown RBP9.1□□□□□ -0.95
MCF2L-225ENST00000480321 K7EQZ3 153 aa9.09□□□□□ -0.95
MCF2L-225ENST00000480321 PRR34Q9NV39 138 aa9.09□□□□□ -0.95
MCF2L-225ENST00000480321 COA5Q86WW8 74 aa9.09□□□□□ -0.95
MCF2L-225ENST00000480321 PLA2G2DQ9UNK4 145 aa9.07□□□□□ -0.96
MCF2L-225ENST00000480321 SSBP3-AS1Q7Z2R9 100 aa9.07□□□□□ -0.96
MCF2L-225ENST00000480321 LINC00612Q8N6U2 182 aa9.05□□□□□ -0.96
MCF2L-225ENST00000480321 LINC01600Q96MT4 127 aa9.04□□□□□ -0.96
MCF2L-225ENST00000480321 PRR15Q8IV56 129 aa9.04□□□□□ -0.96
MCF2L-225ENST00000480321 TLX1NBP0CAT3 122 aa9.04□□□□□ -0.96
MCF2L-225ENST00000480321 FAM168BA1KXE4 195 aa9.03□□□□□ -0.96
MCF2L-225ENST00000480321 EIF4EBP3O60516 100 aaPredicted RBP9.03□□□□□ -0.96
MCF2L-225ENST00000480321 IGFL1Q6UW32 110 aa9.02□□□□□ -0.96
MCF2L-225ENST00000480321 EP400Q96L91 3159 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms